Strain Fitness in Dechlorosoma suillum PS around Dsui_0902

Experiment: with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_0900 and Dsui_0901 are separated by 23 nucleotidesDsui_0901 and Dsui_0902 are separated by 20 nucleotidesDsui_0902 and Dsui_0903 overlap by 4 nucleotides Dsui_0900: Dsui_0900 - branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase, at 918,527 to 919,390 _0900 Dsui_0901: Dsui_0901 - hypothetical protein, at 919,414 to 919,713 _0901 Dsui_0902: Dsui_0902 - lipoate-protein ligase B, at 919,734 to 920,354 _0902 Dsui_0903: Dsui_0903 - lipoate synthase, at 920,351 to 921,298 _0903 Position (kb) 919 920 921Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1 2 3at 918.782 kb on + strand, within Dsui_0900at 918.870 kb on + strand, within Dsui_0900at 918.977 kb on - strand, within Dsui_0900at 919.020 kb on + strand, within Dsui_0900at 919.101 kb on - strand, within Dsui_0900at 919.119 kb on + strand, within Dsui_0900at 919.214 kb on + strand, within Dsui_0900at 919.225 kb on - strand, within Dsui_0900at 919.320 kb on + strandat 919.384 kb on + strandat 919.476 kb on + strand, within Dsui_0901at 919.618 kb on + strand, within Dsui_0901at 921.256 kb on + strandat 921.256 kb on + strandat 921.266 kb on + strandat 921.269 kb on + strandat 921.274 kb on + strandat 921.274 kb on + strandat 921.274 kb on + strandat 921.274 kb on + strandat 921.274 kb on + strandat 921.274 kb on + strandat 921.274 kb on + strandat 921.274 kb on + strandat 921.274 kb on + strandat 921.274 kb on + strandat 921.274 kb on + strandat 921.274 kb on + strandat 921.274 kb on + strandat 921.274 kb on + strandat 921.274 kb on + strandat 921.274 kb on + strandat 921.274 kb on + strandat 921.274 kb on + strandat 921.274 kb on + strandat 921.274 kb on + strandat 921.274 kb on + strandat 921.274 kb on + strandat 921.274 kb on + strandat 921.274 kb on + strandat 921.274 kb on + strandat 921.274 kb on + strandat 921.274 kb on + strandat 921.274 kb on + strandat 921.274 kb on + strandat 921.274 kb on + strandat 921.274 kb on + strandat 921.274 kb on + strandat 921.274 kb on + strandat 921.274 kb on + strandat 921.274 kb on + strandat 921.274 kb on + strandat 921.274 kb on + strandat 921.274 kb on + strandat 921.274 kb on + strandat 921.274 kb on + strandat 921.274 kb on + strandat 921.274 kb on + strandat 921.274 kb on + strandat 921.274 kb on + strandat 921.274 kb on + strandat 921.274 kb on + strandat 921.274 kb on + strandat 921.274 kb on + strandat 921.274 kb on + strandat 921.274 kb on + strandat 921.274 kb on + strandat 921.274 kb on + strandat 921.274 kb on + strandat 921.274 kb on + strandat 921.274 kb on + strandat 921.274 kb on + strandat 921.274 kb on + strandat 921.274 kb on + strandat 921.274 kb on + strandat 921.274 kb on + strandat 921.275 kb on + strandat 921.276 kb on - strandat 921.282 kb on + strandat 921.282 kb on + strandat 921.282 kb on + strandat 921.282 kb on + strandat 921.282 kb on - strandat 921.282 kb on - strandat 921.282 kb on - strandat 921.282 kb on - strandat 921.282 kb on - strandat 921.282 kb on - strandat 921.282 kb on - strandat 921.282 kb on - strandat 921.282 kb on - strandat 921.282 kb on - strandat 921.282 kb on - strandat 921.282 kb on - strandat 921.282 kb on - strandat 921.282 kb on - strandat 921.290 kb on - strandat 921.290 kb on - strandat 921.292 kb on + strandat 921.293 kb on + strandat 921.293 kb on + strandat 921.293 kb on + strandat 921.293 kb on + strandat 921.293 kb on + strandat 921.293 kb on - strandat 921.300 kb on - strandat 921.301 kb on - strandat 921.301 kb on - strandat 921.301 kb on - strandat 921.301 kb on - strandat 921.315 kb on + strandat 921.315 kb on + strandat 921.318 kb on - strandat 921.318 kb on - strandat 921.318 kb on - strandat 921.318 kb on - strandat 921.318 kb on - strandat 921.322 kb on + strandat 921.323 kb on - strandat 921.323 kb on - strandat 921.328 kb on - strandat 921.328 kb on - strandat 921.328 kb on - strandat 921.331 kb on + strandat 921.338 kb on + strandat 921.339 kb on - strandat 921.339 kb on - strandat 921.339 kb on - strandat 921.339 kb on - strandat 921.348 kb on + strandat 921.350 kb on + strandat 921.350 kb on + strandat 921.350 kb on + strandat 921.350 kb on + strandat 921.350 kb on + strandat 921.350 kb on + strandat 921.350 kb on + strandat 921.350 kb on + strandat 921.350 kb on + strandat 921.350 kb on + strandat 921.350 kb on + strandat 921.350 kb on + strandat 921.350 kb on + strandat 921.350 kb on + strandat 921.350 kb on + strandat 921.350 kb on + strandat 921.350 kb on + strandat 921.350 kb on + strandat 921.350 kb on + strandat 921.350 kb on + strandat 921.350 kb on + strandat 921.350 kb on + strandat 921.350 kb on + strandat 921.350 kb on + strandat 921.350 kb on + strandat 921.350 kb on + strandat 921.350 kb on + strandat 921.350 kb on + strandat 921.350 kb on + strandat 921.350 kb on + strandat 921.350 kb on + strandat 921.350 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
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918,782 + Dsui_0900 0.30 -0.7
918,870 + Dsui_0900 0.40 +1.1
918,977 - Dsui_0900 0.52 -1.6
919,020 + Dsui_0900 0.57 +0.1
919,101 - Dsui_0900 0.66 -0.3
919,119 + Dsui_0900 0.69 +3.3
919,214 + Dsui_0900 0.80 +1.4
919,225 - Dsui_0900 0.81 -0.8
919,320 + +0.1
919,384 + +1.0
919,476 + Dsui_0901 0.21 -1.1
919,618 + Dsui_0901 0.68 +0.9
921,256 + +3.7
921,256 + -1.5
921,266 + -2.0
921,269 + -0.4
921,274 + -0.8
921,274 + +0.1
921,274 + +0.9
921,274 + +1.0
921,274 + +1.4
921,274 + -0.1
921,274 + +0.8
921,274 + +0.5
921,274 + +0.5
921,274 + -0.1
921,274 + +0.0
921,274 + +0.2
921,274 + -5.2
921,274 + +0.1
921,274 + -0.1
921,274 + +1.2
921,274 + -4.4
921,274 + +1.3
921,274 + -0.2
921,274 + +0.5
921,274 + +1.5
921,274 + -0.8
921,274 + -0.9
921,274 + +1.8
921,274 + -1.0
921,274 + +0.2
921,274 + -0.3
921,274 + -0.8
921,274 + -0.0
921,274 + -0.6
921,274 + +1.2
921,274 + +0.2
921,274 + -0.3
921,274 + +0.5
921,274 + -0.2
921,274 + +1.8
921,274 + +0.6
921,274 + -1.3
921,274 + +1.2
921,274 + +1.7
921,274 + +0.3
921,274 + -1.3
921,274 + +0.1
921,274 + +0.4
921,274 + +0.3
921,274 + -0.0
921,274 + +0.1
921,274 + -0.4
921,274 + +1.4
921,274 + +1.7
921,274 + -1.7
921,274 + -1.7
921,274 + -0.7
921,274 + -2.4
921,274 + -0.5
921,274 + +0.7
921,274 + +0.0
921,274 + -0.1
921,274 + -0.7
921,274 + -0.3
921,275 + -4.2
921,276 - -0.5
921,282 + +0.5
921,282 + +1.4
921,282 + -1.2
921,282 + +0.5
921,282 - -1.5
921,282 - -3.7
921,282 - -0.6
921,282 - +0.2
921,282 - -1.7
921,282 - -2.8
921,282 - -2.0
921,282 - -0.4
921,282 - -0.3
921,282 - -2.4
921,282 - -1.0
921,282 - -1.5
921,282 - -2.5
921,282 - -0.5
921,290 - -1.0
921,290 - +0.9
921,292 + +1.5
921,293 + +1.3
921,293 + +0.8
921,293 + +1.5
921,293 + +1.1
921,293 + +1.5
921,293 - -1.8
921,300 - -0.1
921,301 - +0.2
921,301 - -0.1
921,301 - -0.2
921,301 - -3.4
921,315 + +1.3
921,315 + +2.0
921,318 - -0.9
921,318 - -0.5
921,318 - -2.5
921,318 - -0.3
921,318 - -0.3
921,322 + +0.8
921,323 - +0.4
921,323 - -2.7
921,328 - -1.3
921,328 - -1.0
921,328 - -2.5
921,331 + +0.8
921,338 + -0.0
921,339 - -0.1
921,339 - -3.2
921,339 - +1.3
921,339 - +1.4
921,348 + +1.1
921,350 + +1.3
921,350 + +1.2
921,350 + +0.3
921,350 + +1.0
921,350 + -1.0
921,350 + -0.0
921,350 + +1.5
921,350 + +1.3
921,350 + +0.8
921,350 + +0.5
921,350 + +1.2
921,350 + +1.0
921,350 + +1.2
921,350 + +1.1
921,350 + +1.2
921,350 + +1.6
921,350 + +1.4
921,350 + +0.5
921,350 + +0.6
921,350 + +1.3
921,350 + +1.6
921,350 + +1.0
921,350 + +1.4
921,350 + +0.8
921,350 + -0.1
921,350 + +0.4
921,350 + +2.7
921,350 + +1.1
921,350 + +0.8
921,350 + +0.3
921,350 + +0.9
921,350 + +1.1

Or see this region's nucleotide sequence