Strain Fitness in Dechlorosoma suillum PS around Dsui_0757

Experiment: with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_0755 and Dsui_0756 are separated by 142 nucleotidesDsui_0756 and Dsui_0757 are separated by 43 nucleotidesDsui_0757 and Dsui_0758 are separated by 142 nucleotides Dsui_0755: Dsui_0755 - hypothetical protein, at 754,489 to 755,103 _0755 Dsui_0756: Dsui_0756 - hypothetical protein, at 755,246 to 755,941 _0756 Dsui_0757: Dsui_0757 - HD-GYP domain-containing protein, at 755,985 to 757,190 _0757 Dsui_0758: Dsui_0758 - ATPase component of ABC transporters with duplicated ATPase domain, at 757,333 to 759,237 _0758 Position (kb) 755 756 757 758Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 755.007 kb on - strand, within Dsui_0755at 755.080 kb on + strandat 755.098 kb on + strandat 755.098 kb on + strandat 755.103 kb on + strandat 755.103 kb on + strandat 755.103 kb on + strandat 755.103 kb on + strandat 755.188 kb on + strandat 755.204 kb on + strandat 755.261 kb on - strandat 755.276 kb on + strandat 755.328 kb on + strandat 755.435 kb on - strand, within Dsui_0756at 755.450 kb on - strand, within Dsui_0756at 755.532 kb on + strand, within Dsui_0756at 755.532 kb on + strand, within Dsui_0756at 755.540 kb on - strand, within Dsui_0756at 755.540 kb on - strand, within Dsui_0756at 755.672 kb on - strand, within Dsui_0756at 755.712 kb on + strand, within Dsui_0756at 755.769 kb on - strand, within Dsui_0756at 755.796 kb on + strand, within Dsui_0756at 755.817 kb on + strandat 755.826 kb on + strand, within Dsui_0756at 755.973 kb on + strandat 755.981 kb on - strandat 756.016 kb on + strandat 756.059 kb on - strandat 756.119 kb on - strand, within Dsui_0757at 756.183 kb on + strand, within Dsui_0757at 756.251 kb on + strand, within Dsui_0757at 756.292 kb on + strandat 756.311 kb on - strand, within Dsui_0757at 756.318 kb on - strand, within Dsui_0757at 756.359 kb on - strand, within Dsui_0757at 756.384 kb on + strand, within Dsui_0757at 756.394 kb on + strand, within Dsui_0757at 756.438 kb on - strand, within Dsui_0757at 756.452 kb on + strandat 756.462 kb on + strandat 756.481 kb on - strand, within Dsui_0757at 756.509 kb on - strand, within Dsui_0757at 756.574 kb on - strand, within Dsui_0757at 756.589 kb on - strand, within Dsui_0757at 756.607 kb on + strand, within Dsui_0757at 756.626 kb on + strand, within Dsui_0757at 756.634 kb on - strand, within Dsui_0757at 756.647 kb on + strand, within Dsui_0757at 756.647 kb on + strand, within Dsui_0757at 756.647 kb on + strand, within Dsui_0757at 756.655 kb on - strand, within Dsui_0757at 756.706 kb on + strand, within Dsui_0757at 756.706 kb on + strand, within Dsui_0757at 756.711 kb on + strand, within Dsui_0757at 756.801 kb on - strandat 756.908 kb on + strand, within Dsui_0757at 756.996 kb on + strand, within Dsui_0757at 757.007 kb on + strandat 757.007 kb on + strand, within Dsui_0757at 757.015 kb on - strand, within Dsui_0757at 757.061 kb on - strand, within Dsui_0757at 757.063 kb on - strand, within Dsui_0757at 757.070 kb on + strandat 757.083 kb on - strandat 757.137 kb on - strandat 757.198 kb on + strandat 757.198 kb on + strandat 757.206 kb on - strandat 757.211 kb on - strandat 757.215 kb on - strandat 757.217 kb on + strandat 757.330 kb on + strandat 757.420 kb on - strandat 757.517 kb on - strandat 757.603 kb on - strand, within Dsui_0758at 757.607 kb on + strand, within Dsui_0758at 757.631 kb on - strand, within Dsui_0758at 757.710 kb on + strand, within Dsui_0758at 757.736 kb on + strand, within Dsui_0758at 757.776 kb on + strand, within Dsui_0758at 757.807 kb on + strand, within Dsui_0758at 757.840 kb on - strand, within Dsui_0758at 757.876 kb on - strandat 757.973 kb on + strand, within Dsui_0758at 757.981 kb on - strand, within Dsui_0758at 757.995 kb on + strand, within Dsui_0758at 758.007 kb on + strand, within Dsui_0758at 758.007 kb on + strand, within Dsui_0758at 758.068 kb on - strand, within Dsui_0758at 758.176 kb on + strand, within Dsui_0758

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Per-strain Table

Position Strand Gene LocusTag Fraction with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
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755,007 - Dsui_0755 0.84 +0.9
755,080 + -2.5
755,098 + +1.1
755,098 + -0.0
755,103 + +0.2
755,103 + -0.5
755,103 + -0.1
755,103 + -1.0
755,188 + +1.2
755,204 + -0.7
755,261 - -0.1
755,276 + +0.4
755,328 + -0.3
755,435 - Dsui_0756 0.27 -1.0
755,450 - Dsui_0756 0.29 -1.2
755,532 + Dsui_0756 0.41 -0.9
755,532 + Dsui_0756 0.41 -1.5
755,540 - Dsui_0756 0.42 -0.0
755,540 - Dsui_0756 0.42 -1.6
755,672 - Dsui_0756 0.61 -0.9
755,712 + Dsui_0756 0.67 -1.5
755,769 - Dsui_0756 0.75 -4.0
755,796 + Dsui_0756 0.79 -2.5
755,817 + -2.3
755,826 + Dsui_0756 0.83 -4.4
755,973 + -4.1
755,981 - +0.5
756,016 + +0.6
756,059 - -0.2
756,119 - Dsui_0757 0.11 +0.7
756,183 + Dsui_0757 0.16 +1.6
756,251 + Dsui_0757 0.22 +2.7
756,292 + +1.7
756,311 - Dsui_0757 0.27 +0.7
756,318 - Dsui_0757 0.28 +0.5
756,359 - Dsui_0757 0.31 -0.4
756,384 + Dsui_0757 0.33 -1.8
756,394 + Dsui_0757 0.34 -2.9
756,438 - Dsui_0757 0.38 +0.3
756,452 + -1.3
756,462 + +0.4
756,481 - Dsui_0757 0.41 -0.7
756,509 - Dsui_0757 0.43 -0.2
756,574 - Dsui_0757 0.49 +0.9
756,589 - Dsui_0757 0.50 +0.2
756,607 + Dsui_0757 0.52 -0.3
756,626 + Dsui_0757 0.53 -1.4
756,634 - Dsui_0757 0.54 -0.8
756,647 + Dsui_0757 0.55 +0.5
756,647 + Dsui_0757 0.55 +0.5
756,647 + Dsui_0757 0.55 -0.7
756,655 - Dsui_0757 0.56 +0.8
756,706 + Dsui_0757 0.60 +1.1
756,706 + Dsui_0757 0.60 -0.0
756,711 + Dsui_0757 0.60 +1.3
756,801 - -2.4
756,908 + Dsui_0757 0.77 +0.7
756,996 + Dsui_0757 0.84 -0.6
757,007 + +0.0
757,007 + Dsui_0757 0.85 -0.5
757,015 - Dsui_0757 0.85 +0.1
757,061 - Dsui_0757 0.89 -0.4
757,063 - Dsui_0757 0.89 +0.7
757,070 + +0.4
757,083 - -0.4
757,137 - -0.3
757,198 + +0.1
757,198 + -0.4
757,206 - +0.7
757,211 - +0.8
757,215 - +0.2
757,217 + -1.1
757,330 + -1.0
757,420 - +1.3
757,517 - -0.3
757,603 - Dsui_0758 0.14 -3.7
757,607 + Dsui_0758 0.14 +0.6
757,631 - Dsui_0758 0.16 +0.1
757,710 + Dsui_0758 0.20 -0.1
757,736 + Dsui_0758 0.21 +0.1
757,776 + Dsui_0758 0.23 -0.1
757,807 + Dsui_0758 0.25 -0.9
757,840 - Dsui_0758 0.27 -0.7
757,876 - +0.1
757,973 + Dsui_0758 0.34 +0.6
757,981 - Dsui_0758 0.34 -1.1
757,995 + Dsui_0758 0.35 +1.0
758,007 + Dsui_0758 0.35 +0.5
758,007 + Dsui_0758 0.35 +0.6
758,068 - Dsui_0758 0.39 -2.1
758,176 + Dsui_0758 0.44 -0.3

Or see this region's nucleotide sequence