Experiment: with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0084 and Dsui_0085 are separated by 303 nucleotides Dsui_0085 and Dsui_0086 are separated by 14 nucleotides Dsui_0086 and Dsui_0087 overlap by 4 nucleotides
Dsui_0084: Dsui_0084 - ABC-type bacteriocin/lantibiotic exporter with N-terminal double-glycine peptidase domain, at 81,265 to 83,040
_0084
Dsui_0085: Dsui_0085 - GDP-mannose 4,6-dehydratase, at 83,344 to 84,435
_0085
Dsui_0086: Dsui_0086 - nucleoside-diphosphate-sugar epimerase, at 84,450 to 85,421
_0086
Dsui_0087: Dsui_0087 - mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase, at 85,418 to 86,854
_0087
Position (kb)
83
84
85 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1
2 at 82.352 kb on + strand, within Dsui_0084 at 82.387 kb on - strand, within Dsui_0084 at 82.484 kb on + strand, within Dsui_0084 at 82.493 kb on - strand, within Dsui_0084 at 82.494 kb on + strand, within Dsui_0084 at 82.499 kb on + strand, within Dsui_0084 at 82.502 kb on - strand, within Dsui_0084 at 82.533 kb on + strand, within Dsui_0084 at 82.541 kb on - strand, within Dsui_0084 at 82.605 kb on - strand, within Dsui_0084 at 82.654 kb on - strand, within Dsui_0084 at 82.654 kb on - strand, within Dsui_0084 at 82.654 kb on - strand, within Dsui_0084 at 82.689 kb on + strand, within Dsui_0084 at 82.697 kb on - strand, within Dsui_0084 at 82.697 kb on - strand, within Dsui_0084 at 82.748 kb on - strand, within Dsui_0084 at 82.782 kb on + strand, within Dsui_0084 at 82.787 kb on - strand, within Dsui_0084 at 82.789 kb on + strand, within Dsui_0084 at 82.812 kb on + strand, within Dsui_0084 at 82.816 kb on - strand, within Dsui_0084 at 82.840 kb on - strand, within Dsui_0084 at 82.910 kb on + strand at 82.927 kb on - strand at 82.937 kb on - strand at 82.937 kb on - strand at 82.945 kb on - strand at 82.968 kb on - strand at 83.002 kb on - strand at 83.008 kb on + strand at 83.034 kb on + strand at 83.116 kb on - strand at 83.133 kb on - strand at 83.150 kb on - strand at 83.168 kb on + strand at 83.168 kb on + strand at 83.168 kb on + strand at 83.168 kb on + strand at 83.168 kb on + strand at 83.168 kb on + strand at 83.168 kb on + strand at 83.168 kb on + strand at 83.168 kb on + strand at 83.176 kb on - strand at 83.176 kb on - strand at 83.176 kb on - strand at 83.176 kb on - strand at 83.176 kb on - strand at 83.176 kb on - strand at 83.176 kb on - strand at 83.176 kb on - strand at 83.202 kb on - strand at 83.263 kb on + strand at 83.290 kb on + strand at 83.298 kb on - strand at 83.298 kb on - strand at 83.298 kb on - strand at 83.298 kb on - strand at 83.303 kb on - strand at 83.356 kb on + strand at 83.356 kb on + strand at 83.371 kb on - strand at 83.371 kb on - strand at 83.405 kb on + strand at 83.407 kb on + strand at 83.407 kb on + strand at 83.413 kb on - strand at 83.413 kb on - strand at 83.415 kb on - strand at 83.415 kb on - strand at 83.415 kb on - strand at 83.426 kb on + strand at 83.535 kb on - strand, within Dsui_0085 at 83.577 kb on - strand, within Dsui_0085 at 83.607 kb on - strand, within Dsui_0085 at 83.630 kb on - strand, within Dsui_0085 at 83.654 kb on + strand, within Dsui_0085 at 83.655 kb on - strand, within Dsui_0085 at 83.659 kb on + strand, within Dsui_0085 at 83.659 kb on + strand, within Dsui_0085 at 83.665 kb on - strand, within Dsui_0085 at 83.667 kb on - strand, within Dsui_0085 at 83.747 kb on + strand, within Dsui_0085 at 83.762 kb on + strand, within Dsui_0085 at 83.773 kb on + strand, within Dsui_0085 at 83.795 kb on + strand, within Dsui_0085 at 83.796 kb on - strand, within Dsui_0085 at 83.802 kb on + strand, within Dsui_0085 at 83.804 kb on - strand, within Dsui_0085 at 83.864 kb on - strand, within Dsui_0085 at 83.885 kb on + strand, within Dsui_0085 at 83.893 kb on + strand, within Dsui_0085 at 83.893 kb on + strand, within Dsui_0085 at 83.894 kb on - strand, within Dsui_0085 at 83.895 kb on + strand, within Dsui_0085 at 83.901 kb on - strand, within Dsui_0085 at 83.916 kb on - strand, within Dsui_0085 at 83.939 kb on + strand, within Dsui_0085 at 83.939 kb on + strand, within Dsui_0085 at 83.947 kb on - strand, within Dsui_0085 at 83.947 kb on - strand, within Dsui_0085 at 83.947 kb on - strand, within Dsui_0085 at 83.947 kb on - strand, within Dsui_0085 at 83.947 kb on - strand, within Dsui_0085 at 83.947 kb on - strand, within Dsui_0085 at 83.958 kb on + strand at 83.958 kb on + strand, within Dsui_0085 at 83.964 kb on - strand, within Dsui_0085 at 83.966 kb on - strand, within Dsui_0085 at 84.009 kb on + strand, within Dsui_0085 at 84.024 kb on + strand, within Dsui_0085 at 84.024 kb on + strand, within Dsui_0085 at 84.024 kb on + strand at 84.032 kb on - strand, within Dsui_0085 at 84.032 kb on - strand, within Dsui_0085 at 84.032 kb on - strand, within Dsui_0085 at 84.032 kb on - strand, within Dsui_0085 at 84.032 kb on - strand, within Dsui_0085 at 84.084 kb on + strand, within Dsui_0085 at 84.102 kb on + strand, within Dsui_0085 at 84.108 kb on - strand, within Dsui_0085 at 84.110 kb on - strand, within Dsui_0085 at 84.124 kb on + strand, within Dsui_0085 at 84.145 kb on + strand, within Dsui_0085 at 84.160 kb on + strand, within Dsui_0085 at 84.160 kb on + strand, within Dsui_0085 at 84.168 kb on - strand, within Dsui_0085 at 84.168 kb on - strand, within Dsui_0085 at 84.219 kb on + strand, within Dsui_0085 at 84.219 kb on + strand, within Dsui_0085 at 84.219 kb on + strand, within Dsui_0085 at 84.219 kb on + strand, within Dsui_0085 at 84.219 kb on + strand, within Dsui_0085 at 84.219 kb on + strand, within Dsui_0085 at 84.219 kb on + strand, within Dsui_0085 at 84.219 kb on + strand, within Dsui_0085 at 84.227 kb on - strand, within Dsui_0085 at 84.227 kb on - strand, within Dsui_0085 at 84.227 kb on - strand, within Dsui_0085 at 84.227 kb on - strand, within Dsui_0085 at 84.227 kb on - strand, within Dsui_0085 at 84.227 kb on - strand, within Dsui_0085 at 84.292 kb on - strand, within Dsui_0085 at 84.293 kb on - strand, within Dsui_0085 at 84.308 kb on + strand, within Dsui_0085 at 84.345 kb on + strand at 84.347 kb on + strand at 84.347 kb on + strand at 84.354 kb on - strand at 84.355 kb on - strand at 84.378 kb on + strand at 84.382 kb on + strand at 84.404 kb on + strand at 84.412 kb on - strand at 84.425 kb on + strand at 84.439 kb on + strand at 84.439 kb on + strand at 84.447 kb on - strand at 84.447 kb on - strand at 84.483 kb on + strand at 84.483 kb on + strand at 84.491 kb on - strand at 84.491 kb on - strand at 84.491 kb on - strand at 84.501 kb on + strand at 84.545 kb on + strand at 84.545 kb on + strand at 84.581 kb on - strand, within Dsui_0086 at 84.690 kb on + strand, within Dsui_0086 at 84.765 kb on - strand, within Dsui_0086 at 84.773 kb on + strand, within Dsui_0086 at 84.804 kb on + strand, within Dsui_0086 at 84.804 kb on + strand, within Dsui_0086 at 84.843 kb on - strand, within Dsui_0086 at 84.858 kb on + strand, within Dsui_0086 at 84.858 kb on + strand, within Dsui_0086 at 84.907 kb on + strand, within Dsui_0086 at 84.959 kb on - strand, within Dsui_0086 at 84.977 kb on + strand, within Dsui_0086 at 84.985 kb on - strand, within Dsui_0086 at 84.985 kb on - strand, within Dsui_0086 at 85.022 kb on + strand, within Dsui_0086 at 85.022 kb on + strand, within Dsui_0086 at 85.030 kb on - strand, within Dsui_0086 at 85.030 kb on - strand, within Dsui_0086 at 85.030 kb on - strand, within Dsui_0086 at 85.030 kb on - strand, within Dsui_0086 at 85.030 kb on - strand, within Dsui_0086 at 85.030 kb on - strand, within Dsui_0086 at 85.040 kb on + strand at 85.048 kb on - strand, within Dsui_0086 at 85.073 kb on + strand, within Dsui_0086 at 85.073 kb on + strand, within Dsui_0086 at 85.164 kb on - strand, within Dsui_0086 at 85.187 kb on + strand, within Dsui_0086 at 85.218 kb on - strand, within Dsui_0086 at 85.231 kb on + strand, within Dsui_0086 at 85.326 kb on - strand at 85.422 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate remove 82,352 + Dsui_0084 0.61 -2.8 82,387 - Dsui_0084 0.63 -2.7 82,484 + Dsui_0084 0.69 -2.1 82,493 - Dsui_0084 0.69 -2.5 82,494 + Dsui_0084 0.69 -2.6 82,499 + Dsui_0084 0.69 -4.7 82,502 - Dsui_0084 0.70 -2.5 82,533 + Dsui_0084 0.71 -2.0 82,541 - Dsui_0084 0.72 -3.8 82,605 - Dsui_0084 0.75 -2.7 82,654 - Dsui_0084 0.78 -3.2 82,654 - Dsui_0084 0.78 -4.5 82,654 - Dsui_0084 0.78 -3.7 82,689 + Dsui_0084 0.80 -5.4 82,697 - Dsui_0084 0.81 -1.9 82,697 - Dsui_0084 0.81 -3.0 82,748 - Dsui_0084 0.84 +0.1 82,782 + Dsui_0084 0.85 -2.2 82,787 - Dsui_0084 0.86 +1.7 82,789 + Dsui_0084 0.86 -1.8 82,812 + Dsui_0084 0.87 -3.5 82,816 - Dsui_0084 0.87 -1.0 82,840 - Dsui_0084 0.89 -1.8 82,910 + -3.3 82,927 - -4.9 82,937 - -1.7 82,937 - -3.3 82,945 - -2.4 82,968 - -1.7 83,002 - -2.3 83,008 + -3.5 83,034 + -1.6 83,116 - +1.5 83,133 - +1.5 83,150 - +1.4 83,168 + +0.0 83,168 + -1.8 83,168 + +0.6 83,168 + -0.1 83,168 + -0.9 83,168 + +0.1 83,168 + -0.3 83,168 + +1.2 83,168 + +1.0 83,176 - +1.2 83,176 - +0.7 83,176 - +0.7 83,176 - +1.0 83,176 - +0.9 83,176 - +0.9 83,176 - +1.3 83,176 - +1.1 83,202 - +1.9 83,263 + -1.3 83,290 + +1.3 83,298 - +1.2 83,298 - +0.8 83,298 - +1.9 83,298 - +1.3 83,303 - +1.0 83,356 + -2.0 83,356 + -0.6 83,371 - +0.3 83,371 - +1.4 83,405 + -2.3 83,407 + -3.3 83,407 + -0.4 83,413 - -0.5 83,413 - -0.1 83,415 - +1.7 83,415 - -3.2 83,415 - -3.5 83,426 + -2.5 83,535 - Dsui_0085 0.17 -0.7 83,577 - Dsui_0085 0.21 -1.7 83,607 - Dsui_0085 0.24 -2.5 83,630 - Dsui_0085 0.26 -2.0 83,654 + Dsui_0085 0.28 -0.8 83,655 - Dsui_0085 0.28 +0.2 83,659 + Dsui_0085 0.29 -3.0 83,659 + Dsui_0085 0.29 -3.4 83,665 - Dsui_0085 0.29 -0.3 83,667 - Dsui_0085 0.30 -0.8 83,747 + Dsui_0085 0.37 -2.7 83,762 + Dsui_0085 0.38 +1.7 83,773 + Dsui_0085 0.39 -0.8 83,795 + Dsui_0085 0.41 -2.3 83,796 - Dsui_0085 0.41 -1.4 83,802 + Dsui_0085 0.42 -2.5 83,804 - Dsui_0085 0.42 -2.3 83,864 - Dsui_0085 0.48 -4.7 83,885 + Dsui_0085 0.50 -2.6 83,893 + Dsui_0085 0.50 -1.4 83,893 + Dsui_0085 0.50 -0.6 83,894 - Dsui_0085 0.50 -2.1 83,895 + Dsui_0085 0.50 -0.8 83,901 - Dsui_0085 0.51 -3.1 83,916 - Dsui_0085 0.52 -2.2 83,939 + Dsui_0085 0.54 -1.7 83,939 + Dsui_0085 0.54 -0.8 83,947 - Dsui_0085 0.55 -3.4 83,947 - Dsui_0085 0.55 -1.3 83,947 - Dsui_0085 0.55 -2.3 83,947 - Dsui_0085 0.55 +1.1 83,947 - Dsui_0085 0.55 -3.1 83,947 - Dsui_0085 0.55 -0.8 83,958 + +1.7 83,958 + Dsui_0085 0.56 -2.5 83,964 - Dsui_0085 0.57 -0.0 83,966 - Dsui_0085 0.57 -2.5 84,009 + Dsui_0085 0.61 -2.1 84,024 + Dsui_0085 0.62 -2.1 84,024 + Dsui_0085 0.62 -0.8 84,024 + -0.3 84,032 - Dsui_0085 0.63 +1.7 84,032 - Dsui_0085 0.63 -1.7 84,032 - Dsui_0085 0.63 -2.4 84,032 - Dsui_0085 0.63 -4.5 84,032 - Dsui_0085 0.63 -2.1 84,084 + Dsui_0085 0.68 -1.4 84,102 + Dsui_0085 0.69 -1.7 84,108 - Dsui_0085 0.70 -0.6 84,110 - Dsui_0085 0.70 -4.0 84,124 + Dsui_0085 0.71 -2.1 84,145 + Dsui_0085 0.73 +0.2 84,160 + Dsui_0085 0.75 -0.3 84,160 + Dsui_0085 0.75 -3.1 84,168 - Dsui_0085 0.75 -0.8 84,168 - Dsui_0085 0.75 -2.4 84,219 + Dsui_0085 0.80 -1.9 84,219 + Dsui_0085 0.80 +1.2 84,219 + Dsui_0085 0.80 -2.3 84,219 + Dsui_0085 0.80 -1.3 84,219 + Dsui_0085 0.80 -0.6 84,219 + Dsui_0085 0.80 -2.3 84,219 + Dsui_0085 0.80 -3.1 84,219 + Dsui_0085 0.80 +1.7 84,227 - Dsui_0085 0.81 +1.7 84,227 - Dsui_0085 0.81 -1.1 84,227 - Dsui_0085 0.81 +0.2 84,227 - Dsui_0085 0.81 -3.0 84,227 - Dsui_0085 0.81 -2.3 84,227 - Dsui_0085 0.81 -2.5 84,292 - Dsui_0085 0.87 -2.5 84,293 - Dsui_0085 0.87 -3.9 84,308 + Dsui_0085 0.88 -2.6 84,345 + -3.6 84,347 + -1.1 84,347 + -2.3 84,354 - -4.1 84,355 - -2.5 84,378 + -1.8 84,382 + -0.8 84,404 + -0.6 84,412 - -0.8 84,425 + -1.8 84,439 + -2.8 84,439 + -3.9 84,447 - +0.8 84,447 - -2.5 84,483 + -1.8 84,483 + +0.7 84,491 - -1.6 84,491 - -3.0 84,491 - -3.1 84,501 + -0.3 84,545 + -1.3 84,545 + +1.7 84,581 - Dsui_0086 0.13 -3.1 84,690 + Dsui_0086 0.25 -2.0 84,765 - Dsui_0086 0.32 -2.3 84,773 + Dsui_0086 0.33 -1.4 84,804 + Dsui_0086 0.36 -2.3 84,804 + Dsui_0086 0.36 -0.6 84,843 - Dsui_0086 0.40 -3.7 84,858 + Dsui_0086 0.42 +0.7 84,858 + Dsui_0086 0.42 -2.5 84,907 + Dsui_0086 0.47 -0.8 84,959 - Dsui_0086 0.52 +0.4 84,977 + Dsui_0086 0.54 -2.3 84,985 - Dsui_0086 0.55 -4.4 84,985 - Dsui_0086 0.55 -2.3 85,022 + Dsui_0086 0.59 -2.4 85,022 + Dsui_0086 0.59 -0.8 85,030 - Dsui_0086 0.60 -1.1 85,030 - Dsui_0086 0.60 +1.9 85,030 - Dsui_0086 0.60 +1.7 85,030 - Dsui_0086 0.60 -0.3 85,030 - Dsui_0086 0.60 -1.1 85,030 - Dsui_0086 0.60 -1.8 85,040 + +1.7 85,048 - Dsui_0086 0.62 -2.8 85,073 + Dsui_0086 0.64 -3.8 85,073 + Dsui_0086 0.64 -1.6 85,164 - Dsui_0086 0.73 -3.8 85,187 + Dsui_0086 0.76 +1.7 85,218 - Dsui_0086 0.79 -3.0 85,231 + Dsui_0086 0.80 -2.2 85,326 - -2.0 85,422 - +1.2
Or see this region's nucleotide sequence