Experiment: L-Leucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_832 and Ac3H11_833 are separated by 498 nucleotides Ac3H11_833 and Ac3H11_834 are separated by 54 nucleotides Ac3H11_834 and Ac3H11_835 are separated by 159 nucleotides
Ac3H11_832 - D-amino acid dehydrogenase small subunit (EC 1.4.99.1), at 114,974 to 116,218
_832
Ac3H11_833 - 2-keto-4-pentenoate hydratase (EC 4.2.1.80), at 116,717 to 117,511
_833
Ac3H11_834 - putative signal peptide protein, at 117,566 to 118,021
_834
Ac3H11_835 - hypothetical protein, at 118,181 to 118,561
_835
Position (kb)
116
117
118 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 115.722 kb on + strand, within Ac3H11_832 at 115.722 kb on + strand, within Ac3H11_832 at 115.722 kb on + strand, within Ac3H11_832 at 115.722 kb on + strand, within Ac3H11_832 at 115.722 kb on + strand, within Ac3H11_832 at 115.722 kb on + strand, within Ac3H11_832 at 115.723 kb on - strand, within Ac3H11_832 at 115.723 kb on - strand, within Ac3H11_832 at 115.723 kb on - strand, within Ac3H11_832 at 115.870 kb on + strand, within Ac3H11_832 at 115.870 kb on + strand, within Ac3H11_832 at 115.871 kb on - strand, within Ac3H11_832 at 115.871 kb on - strand, within Ac3H11_832 at 115.871 kb on - strand, within Ac3H11_832 at 115.872 kb on + strand, within Ac3H11_832 at 115.872 kb on + strand, within Ac3H11_832 at 115.872 kb on + strand, within Ac3H11_832 at 115.872 kb on + strand, within Ac3H11_832 at 115.872 kb on + strand, within Ac3H11_832 at 115.872 kb on + strand, within Ac3H11_832 at 115.872 kb on + strand, within Ac3H11_832 at 115.872 kb on + strand, within Ac3H11_832 at 115.872 kb on + strand, within Ac3H11_832 at 115.872 kb on + strand, within Ac3H11_832 at 115.872 kb on + strand, within Ac3H11_832 at 115.873 kb on - strand, within Ac3H11_832 at 115.873 kb on - strand, within Ac3H11_832 at 115.873 kb on - strand, within Ac3H11_832 at 115.873 kb on - strand, within Ac3H11_832 at 115.873 kb on - strand, within Ac3H11_832 at 115.873 kb on - strand, within Ac3H11_832 at 115.873 kb on - strand, within Ac3H11_832 at 115.873 kb on - strand, within Ac3H11_832 at 115.873 kb on - strand, within Ac3H11_832 at 115.873 kb on - strand, within Ac3H11_832 at 115.873 kb on - strand, within Ac3H11_832 at 115.873 kb on - strand, within Ac3H11_832 at 115.873 kb on - strand, within Ac3H11_832 at 115.873 kb on - strand, within Ac3H11_832 at 115.873 kb on - strand, within Ac3H11_832 at 115.873 kb on - strand, within Ac3H11_832 at 115.873 kb on - strand, within Ac3H11_832 at 115.905 kb on + strand, within Ac3H11_832 at 115.905 kb on + strand, within Ac3H11_832 at 115.906 kb on - strand, within Ac3H11_832 at 115.906 kb on - strand, within Ac3H11_832 at 115.906 kb on - strand, within Ac3H11_832 at 115.953 kb on + strand, within Ac3H11_832 at 115.953 kb on + strand, within Ac3H11_832 at 115.953 kb on + strand, within Ac3H11_832 at 115.954 kb on - strand, within Ac3H11_832 at 115.954 kb on - strand, within Ac3H11_832 at 115.954 kb on - strand, within Ac3H11_832 at 115.954 kb on - strand, within Ac3H11_832 at 115.954 kb on - strand, within Ac3H11_832 at 115.954 kb on - strand, within Ac3H11_832 at 116.244 kb on + strand at 116.244 kb on + strand at 116.244 kb on + strand at 116.245 kb on - strand at 116.245 kb on - strand at 116.245 kb on - strand at 116.245 kb on - strand at 116.308 kb on - strand at 116.330 kb on - strand at 116.346 kb on + strand at 116.405 kb on + strand at 116.405 kb on + strand at 116.405 kb on + strand at 116.406 kb on - strand at 116.406 kb on - strand at 116.406 kb on - strand at 116.406 kb on - strand at 116.406 kb on - strand at 116.506 kb on + strand at 116.507 kb on - strand at 116.523 kb on + strand at 116.523 kb on + strand at 116.523 kb on + strand at 116.524 kb on - strand at 116.524 kb on - strand at 116.524 kb on - strand at 116.588 kb on + strand at 116.588 kb on + strand at 116.588 kb on + strand at 116.588 kb on + strand at 116.589 kb on - strand at 116.589 kb on - strand at 116.589 kb on - strand at 116.589 kb on - strand at 116.589 kb on - strand at 116.627 kb on - strand at 116.627 kb on - strand at 116.678 kb on - strand at 116.683 kb on + strand at 116.683 kb on + strand at 116.683 kb on + strand at 116.683 kb on + strand at 116.684 kb on - strand at 116.684 kb on - strand at 116.684 kb on - strand at 116.840 kb on + strand, within Ac3H11_833 at 116.841 kb on - strand, within Ac3H11_833 at 116.841 kb on - strand, within Ac3H11_833 at 117.044 kb on + strand, within Ac3H11_833 at 117.044 kb on + strand, within Ac3H11_833 at 117.044 kb on + strand, within Ac3H11_833 at 117.044 kb on + strand, within Ac3H11_833 at 117.045 kb on - strand, within Ac3H11_833 at 117.083 kb on + strand, within Ac3H11_833 at 117.084 kb on - strand, within Ac3H11_833 at 117.730 kb on - strand, within Ac3H11_834 at 117.735 kb on + strand, within Ac3H11_834 at 117.736 kb on - strand, within Ac3H11_834 at 117.873 kb on + strand, within Ac3H11_834 at 117.873 kb on + strand, within Ac3H11_834 at 117.874 kb on - strand, within Ac3H11_834 at 117.874 kb on - strand, within Ac3H11_834 at 117.874 kb on - strand, within Ac3H11_834 at 117.874 kb on - strand, within Ac3H11_834 at 117.874 kb on - strand, within Ac3H11_834 at 117.995 kb on + strand at 117.996 kb on - strand at 117.996 kb on - strand at 118.092 kb on + strand at 118.092 kb on + strand at 118.092 kb on + strand at 118.092 kb on + strand at 118.093 kb on - strand at 118.093 kb on - strand at 118.093 kb on - strand at 118.093 kb on - strand at 118.093 kb on - strand at 118.093 kb on - strand at 118.093 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (N) remove 115,722 + Ac3H11_832 0.60 -0.5 115,722 + Ac3H11_832 0.60 +0.7 115,722 + Ac3H11_832 0.60 -0.4 115,722 + Ac3H11_832 0.60 +0.5 115,722 + Ac3H11_832 0.60 +0.5 115,722 + Ac3H11_832 0.60 +1.0 115,723 - Ac3H11_832 0.60 +0.4 115,723 - Ac3H11_832 0.60 -0.6 115,723 - Ac3H11_832 0.60 +0.8 115,870 + Ac3H11_832 0.72 -1.2 115,870 + Ac3H11_832 0.72 -1.8 115,871 - Ac3H11_832 0.72 -0.0 115,871 - Ac3H11_832 0.72 +1.1 115,871 - Ac3H11_832 0.72 -0.0 115,872 + Ac3H11_832 0.72 +1.5 115,872 + Ac3H11_832 0.72 -0.1 115,872 + Ac3H11_832 0.72 +0.4 115,872 + Ac3H11_832 0.72 +0.1 115,872 + Ac3H11_832 0.72 -0.8 115,872 + Ac3H11_832 0.72 -1.3 115,872 + Ac3H11_832 0.72 +0.1 115,872 + Ac3H11_832 0.72 -0.8 115,872 + Ac3H11_832 0.72 +0.7 115,872 + Ac3H11_832 0.72 +0.8 115,872 + Ac3H11_832 0.72 +0.2 115,873 - Ac3H11_832 0.72 +1.1 115,873 - Ac3H11_832 0.72 +1.9 115,873 - Ac3H11_832 0.72 +0.9 115,873 - Ac3H11_832 0.72 +0.3 115,873 - Ac3H11_832 0.72 -1.7 115,873 - Ac3H11_832 0.72 +1.0 115,873 - Ac3H11_832 0.72 +0.3 115,873 - Ac3H11_832 0.72 -2.0 115,873 - Ac3H11_832 0.72 -2.5 115,873 - Ac3H11_832 0.72 -1.5 115,873 - Ac3H11_832 0.72 -0.3 115,873 - Ac3H11_832 0.72 +0.1 115,873 - Ac3H11_832 0.72 -0.6 115,873 - Ac3H11_832 0.72 +1.8 115,873 - Ac3H11_832 0.72 -2.5 115,873 - Ac3H11_832 0.72 +0.1 115,873 - Ac3H11_832 0.72 -0.9 115,905 + Ac3H11_832 0.75 +0.2 115,905 + Ac3H11_832 0.75 -0.2 115,906 - Ac3H11_832 0.75 +0.6 115,906 - Ac3H11_832 0.75 -0.4 115,906 - Ac3H11_832 0.75 +0.1 115,953 + Ac3H11_832 0.79 -0.1 115,953 + Ac3H11_832 0.79 -1.6 115,953 + Ac3H11_832 0.79 +0.4 115,954 - Ac3H11_832 0.79 -2.3 115,954 - Ac3H11_832 0.79 +1.9 115,954 - Ac3H11_832 0.79 +0.0 115,954 - Ac3H11_832 0.79 +1.3 115,954 - Ac3H11_832 0.79 -1.1 115,954 - Ac3H11_832 0.79 -0.9 116,244 + -2.0 116,244 + +0.9 116,244 + -1.8 116,245 - +1.1 116,245 - -0.9 116,245 - +0.6 116,245 - -1.6 116,308 - -1.3 116,330 - +0.1 116,346 + +2.4 116,405 + +1.4 116,405 + +1.6 116,405 + -0.2 116,406 - +0.6 116,406 - +0.8 116,406 - +1.0 116,406 - -2.2 116,406 - +0.5 116,506 + -1.2 116,507 - +0.4 116,523 + +0.6 116,523 + +1.5 116,523 + -1.0 116,524 - -0.4 116,524 - -0.1 116,524 - +0.3 116,588 + +0.4 116,588 + +0.2 116,588 + -0.6 116,588 + -0.3 116,589 - -0.8 116,589 - +1.2 116,589 - +0.9 116,589 - +0.8 116,589 - +0.0 116,627 - -1.4 116,627 - -0.1 116,678 - -0.9 116,683 + -0.8 116,683 + -1.4 116,683 + +2.0 116,683 + +1.1 116,684 - -0.2 116,684 - +0.2 116,684 - -0.5 116,840 + Ac3H11_833 0.15 -0.3 116,841 - Ac3H11_833 0.16 +0.3 116,841 - Ac3H11_833 0.16 -0.0 117,044 + Ac3H11_833 0.41 -0.9 117,044 + Ac3H11_833 0.41 +0.4 117,044 + Ac3H11_833 0.41 -1.6 117,044 + Ac3H11_833 0.41 +0.7 117,045 - Ac3H11_833 0.41 -0.1 117,083 + Ac3H11_833 0.46 +0.3 117,084 - Ac3H11_833 0.46 +0.3 117,730 - Ac3H11_834 0.36 +1.6 117,735 + Ac3H11_834 0.37 -0.1 117,736 - Ac3H11_834 0.37 -0.5 117,873 + Ac3H11_834 0.67 -0.5 117,873 + Ac3H11_834 0.67 +0.9 117,874 - Ac3H11_834 0.68 -0.8 117,874 - Ac3H11_834 0.68 -1.3 117,874 - Ac3H11_834 0.68 -0.3 117,874 - Ac3H11_834 0.68 +1.3 117,874 - Ac3H11_834 0.68 +1.1 117,995 + +0.9 117,996 - +0.4 117,996 - -0.9 118,092 + -0.2 118,092 + +0.0 118,092 + +1.4 118,092 + -0.2 118,093 - +0.3 118,093 - -0.1 118,093 - +1.1 118,093 - +0.4 118,093 - -0.1 118,093 - +0.1 118,093 - +0.7
Or see this region's nucleotide sequence