Strain Fitness in Acidovorax sp. GW101-3H11 around Ac3H11_3541

Experiment: L-Leucine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAc3H11_3541 and Ac3H11_3542 are separated by 90 nucleotides Ac3H11_3541 - UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9), at 90,057 to 90,944 _3541 Ac3H11_3542 - Valyl-tRNA synthetase (EC 6.1.1.9), at 91,035 to 93,932 _3542 Position (kb) 90 91Strain fitness (log2 ratio) -1 0 1 2at 89.855 kb on + strandat 89.855 kb on + strandat 89.909 kb on + strandat 89.909 kb on + strandat 89.909 kb on + strandat 89.909 kb on + strandat 89.910 kb on - strandat 89.910 kb on - strandat 89.910 kb on - strandat 89.910 kb on - strandat 89.910 kb on - strandat 89.910 kb on - strandat 89.943 kb on - strandat 89.947 kb on + strandat 89.948 kb on - strandat 89.948 kb on - strandat 89.948 kb on - strandat 90.007 kb on - strandat 90.007 kb on - strandat 90.058 kb on + strandat 90.058 kb on + strandat 90.059 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Leucine (N)
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89,855 + -0.7
89,855 + +0.7
89,909 + +1.0
89,909 + +0.7
89,909 + +1.1
89,909 + -1.1
89,910 - +0.6
89,910 - -1.6
89,910 - -0.1
89,910 - -0.5
89,910 - -0.4
89,910 - -0.0
89,943 - +0.8
89,947 + +0.1
89,948 - +0.9
89,948 - -1.4
89,948 - +1.0
90,007 - -0.2
90,007 - -0.6
90,058 + +2.1
90,058 + -0.7
90,059 - +0.4

Or see this region's nucleotide sequence