Experiment: L-Leucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_2316 and Ac3H11_2317 are separated by 16 nucleotides Ac3H11_2317 and Ac3H11_2318 overlap by 15 nucleotides Ac3H11_2318 and Ac3H11_2319 are separated by 141 nucleotides
Ac3H11_2316 - Cell division protein, at 562,889 to 564,004
_2316
Ac3H11_2317 - Chromosome partition protein smc, at 564,021 to 567,485
_2317
Ac3H11_2318 - hypothetical protein, at 567,471 to 567,698
_2318
Ac3H11_2319 - diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s), at 567,840 to 570,920
_2319
Position (kb) 564
565
566
567
568 Strain fitness (log2 ratio) -2
-1
0
1
2 at 563.182 kb on - strand, within Ac3H11_2316 at 563.289 kb on + strand, within Ac3H11_2316 at 563.289 kb on + strand, within Ac3H11_2316 at 563.290 kb on - strand, within Ac3H11_2316 at 563.290 kb on - strand, within Ac3H11_2316 at 563.767 kb on + strand, within Ac3H11_2316 at 563.767 kb on + strand, within Ac3H11_2316 at 563.767 kb on + strand, within Ac3H11_2316 at 563.768 kb on - strand, within Ac3H11_2316 at 563.768 kb on - strand, within Ac3H11_2316 at 563.768 kb on - strand, within Ac3H11_2316 at 563.768 kb on - strand, within Ac3H11_2316 at 563.768 kb on - strand, within Ac3H11_2316 at 563.768 kb on - strand, within Ac3H11_2316 at 563.940 kb on + strand at 563.941 kb on - strand at 563.941 kb on - strand at 563.941 kb on - strand at 563.941 kb on - strand at 563.941 kb on - strand at 563.941 kb on - strand at 563.941 kb on - strand at 567.646 kb on + strand, within Ac3H11_2318 at 567.759 kb on - strand at 567.760 kb on + strand at 567.760 kb on + strand at 567.761 kb on - strand at 567.761 kb on - strand at 567.781 kb on + strand at 567.781 kb on + strand at 567.781 kb on + strand at 567.781 kb on + strand at 567.782 kb on - strand at 567.782 kb on - strand at 567.782 kb on - strand at 567.782 kb on - strand at 567.928 kb on + strand at 567.928 kb on + strand at 568.132 kb on + strand at 568.133 kb on - strand at 568.148 kb on - strand, within Ac3H11_2319 at 568.187 kb on - strand, within Ac3H11_2319 at 568.187 kb on - strand, within Ac3H11_2319
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (N) remove 563,182 - Ac3H11_2316 0.26 -0.7 563,289 + Ac3H11_2316 0.36 -1.5 563,289 + Ac3H11_2316 0.36 +1.1 563,290 - Ac3H11_2316 0.36 +2.1 563,290 - Ac3H11_2316 0.36 -1.1 563,767 + Ac3H11_2316 0.79 -0.7 563,767 + Ac3H11_2316 0.79 -1.0 563,767 + Ac3H11_2316 0.79 +1.8 563,768 - Ac3H11_2316 0.79 -0.5 563,768 - Ac3H11_2316 0.79 +0.6 563,768 - Ac3H11_2316 0.79 -0.2 563,768 - Ac3H11_2316 0.79 -0.0 563,768 - Ac3H11_2316 0.79 +1.6 563,768 - Ac3H11_2316 0.79 -0.1 563,940 + -2.4 563,941 - -0.4 563,941 - -1.6 563,941 - +1.4 563,941 - +0.4 563,941 - +0.4 563,941 - +0.8 563,941 - -0.2 567,646 + Ac3H11_2318 0.77 +1.1 567,759 - -1.8 567,760 + +1.1 567,760 + +0.9 567,761 - +1.1 567,761 - +0.1 567,781 + +0.1 567,781 + +0.3 567,781 + -0.4 567,781 + +0.7 567,782 - -0.3 567,782 - -1.7 567,782 - -1.0 567,782 - +1.4 567,928 + +0.5 567,928 + -0.5 568,132 + +0.8 568,133 - +0.1 568,148 - Ac3H11_2319 0.10 +1.2 568,187 - Ac3H11_2319 0.11 +0.4 568,187 - Ac3H11_2319 0.11 +1.1
Or see this region's nucleotide sequence