Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_28405

Experiment: Nalidixic 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.004 mg/ml
6,189,863	-				-1.2
6,189,901	+				-1.8
6,189,902	-				-0.2
6,189,995	+		AO353_28400	0.14	-0.8
6,189,995	+		AO353_28400	0.14	+0.5
6,189,995	+		AO353_28400	0.14	+0.5
6,189,995	+		AO353_28400	0.14	+0.3
6,189,995	+		AO353_28400	0.14	+0.1
6,189,995	+		AO353_28400	0.14	-0.2
6,190,045	+		AO353_28400	0.21	+0.2
6,190,045	+		AO353_28400	0.21	-1.6
6,190,045	+				+0.3
6,190,046	-		AO353_28400	0.21	+0.6
6,190,046	-		AO353_28400	0.21	+1.0
6,190,349	+		AO353_28400	0.60	+0.0
6,190,350	-		AO353_28400	0.60	-0.2
6,190,396	+		AO353_28400	0.66	-0.2
6,190,397	-		AO353_28400	0.66	-0.0
6,190,420	-		AO353_28400	0.69	+1.3
6,190,420	-		AO353_28400	0.69	+2.8
6,190,420	-		AO353_28400	0.69	-0.2
6,190,429	+		AO353_28400	0.71	-0.1
6,190,430	-		AO353_28400	0.71	+0.3
6,190,430	-		AO353_28400	0.71	-1.6
6,190,430	-		AO353_28400	0.71	+1.8
6,190,460	+		AO353_28400	0.75	-1.2
6,190,461	-		AO353_28400	0.75	-1.0
6,190,514	-		AO353_28400	0.82	-0.0
6,190,557	-		AO353_28400	0.87	-0.7
6,190,743	+				+1.1
6,190,744	-				-0.4
6,190,744	-				-2.3
6,190,744	-				+0.8
6,190,761	+				-1.2
6,190,761	+				+0.5
6,190,762	-				+2.2
6,190,809	+				-0.0
6,190,810	-				+0.2
6,190,816	+				+1.6
6,190,816	+				+0.2
6,190,817	-				-0.4
6,190,817	-				-0.2
6,190,817	-				-0.7
6,190,817	-				+0.3
6,190,850	+		AO353_28405	0.14	+0.8
6,190,850	+		AO353_28405	0.14	-0.8
6,190,850	+		AO353_28405	0.14	+1.0
6,190,850	+		AO353_28405	0.14	+0.8
6,190,850	+		AO353_28405	0.14	+0.8
6,190,851	-		AO353_28405	0.14	+1.3
6,190,851	-		AO353_28405	0.14	-0.1
6,190,851	-		AO353_28405	0.14	+2.3
6,190,851	-		AO353_28405	0.14	+0.8
6,190,851	-		AO353_28405	0.14	+1.8
6,190,872	+		AO353_28405	0.18	-0.2
6,190,888	+		AO353_28405	0.21	-0.2
6,190,889	-		AO353_28405	0.21	-1.7
6,191,050	+		AO353_28405	0.48	+0.9
6,191,080	+		AO353_28405	0.54	+0.3
6,191,412	+				-0.2
6,191,412	+				-1.6
6,191,413	-				+1.4
6,191,413	-				+0.2
6,191,423	+				-0.2
6,191,504	+				-2.9
6,191,504	+				-1.6
6,191,505	-				+0.1
6,191,506	+				+0.0
6,191,545	-				+0.3
6,191,546	+				+0.2
6,191,547	-				-1.2
6,191,560	+				-0.0
6,191,560	+				+0.2
6,191,560	+				+0.0
6,191,560	+				-1.2
6,191,560	+				-1.2
6,191,560	+				-1.2
6,191,560	+				-0.1
6,191,560	+				-2.0
6,191,560	+				+0.8
6,191,561	-				-0.1
6,191,561	-				-0.1
6,191,561	-				-0.0
6,191,561	-				+1.3
6,191,561	-				-0.2
6,191,561	-				-0.2
6,191,561	-				-0.2
6,191,561	-				+1.0
6,191,561	-				-0.7
6,191,561	-				+0.4
6,191,561	-				-0.2
6,191,561	-				-2.0
6,191,565	+				-0.2
6,191,565	+				-1.1
6,191,566	-				-0.4
6,191,566	-				-0.8
6,191,566	-				-1.0
6,191,625	+		AO353_28410	0.18	+1.4
6,191,625	+		AO353_28410	0.18	+1.0
6,191,625	+		AO353_28410	0.18	-1.2
6,191,626	-		AO353_28410	0.18	-1.6
6,191,626	-		AO353_28410	0.18	-0.2
6,191,626	-		AO353_28410	0.18	+0.1
6,191,626	-		AO353_28410	0.18	+1.8
6,191,652	+		AO353_28410	0.24	+1.3
6,191,652	+		AO353_28410	0.24	-0.2
6,191,653	-		AO353_28410	0.24	+0.5
6,191,653	-		AO353_28410	0.24	+2.1
6,191,653	-		AO353_28410	0.24	-0.2
6,191,653	-		AO353_28410	0.24	-0.4
6,191,702	+		AO353_28410	0.35	+0.0
6,191,806	+		AO353_28410	0.57	-0.0
6,191,807	-		AO353_28410	0.58	-0.8
6,191,807	-		AO353_28410	0.58	+0.8
6,191,953	+		AO353_28410	0.89	-0.0
6,191,954	-		AO353_28410	0.90	+0.2
6,191,954	-		AO353_28410	0.90	-1.6
6,191,954	-		AO353_28410	0.90	+1.8
6,191,977	+				-0.0
6,192,117	-				+0.8
6,192,117	-				+0.4
6,192,163	-				+1.2
6,192,163	-				+2.1
6,192,163	-				+0.2
6,192,182	-				+2.0
6,192,182	-				-0.0
6,192,256	+				-0.4
6,192,256	+				-2.0
6,192,257	-				-1.2
6,192,325	+				-0.6
6,192,325	+				+0.4
6,192,325	+				+0.0
6,192,326	-				-0.5
6,192,337	+				-1.6
6,192,338	-		AO353_28415	0.10	-0.2
6,192,338	-		AO353_28415	0.10	+1.0