Experiment: Nalidixic 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_27170 and AO353_27175 are separated by 24 nucleotides AO353_27175 and AO353_27180 are separated by 2 nucleotides AO353_27180 and AO353_27185 are separated by 124 nucleotides AO353_27185 and AO353_27190 are separated by 151 nucleotides
AO353_27170: AO353_27170 - hypothetical protein, at 5,947,691 to 5,948,278
_27170
AO353_27175: AO353_27175 - hypothetical protein, at 5,948,303 to 5,948,638
_27175
AO353_27180: AO353_27180 - peptidase M48, Ste24p, at 5,948,641 to 5,948,955
_27180
AO353_27185: AO353_27185 - hypothetical protein, at 5,949,080 to 5,949,418
_27185
AO353_27190: AO353_27190 - hypothetical protein, at 5,949,570 to 5,949,791
_27190
Position (kb) 5949
5950 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 5948.100 kb on - strand, within AO353_27170 at 5948.100 kb on - strand, within AO353_27170 at 5948.100 kb on - strand, within AO353_27170 at 5948.141 kb on + strand, within AO353_27170 at 5948.141 kb on + strand, within AO353_27170 at 5948.141 kb on + strand, within AO353_27170 at 5948.162 kb on + strand, within AO353_27170 at 5948.162 kb on + strand, within AO353_27170 at 5948.162 kb on + strand, within AO353_27170 at 5948.163 kb on - strand at 5948.165 kb on + strand, within AO353_27170 at 5948.165 kb on + strand, within AO353_27170 at 5948.165 kb on + strand, within AO353_27170 at 5948.165 kb on + strand, within AO353_27170 at 5948.165 kb on + strand, within AO353_27170 at 5948.166 kb on - strand, within AO353_27170 at 5948.166 kb on - strand, within AO353_27170 at 5948.166 kb on - strand, within AO353_27170 at 5948.166 kb on - strand, within AO353_27170 at 5948.166 kb on - strand, within AO353_27170 at 5948.191 kb on + strand, within AO353_27170 at 5948.191 kb on + strand at 5948.191 kb on + strand, within AO353_27170 at 5948.191 kb on + strand, within AO353_27170 at 5948.191 kb on + strand, within AO353_27170 at 5948.192 kb on - strand, within AO353_27170 at 5948.192 kb on - strand, within AO353_27170 at 5948.192 kb on - strand, within AO353_27170 at 5948.192 kb on - strand, within AO353_27170 at 5948.269 kb on + strand at 5948.278 kb on + strand at 5948.278 kb on + strand at 5948.278 kb on + strand at 5948.278 kb on + strand at 5948.279 kb on - strand at 5948.279 kb on - strand at 5948.279 kb on - strand at 5948.279 kb on - strand at 5948.279 kb on - strand at 5948.304 kb on + strand at 5948.304 kb on + strand at 5948.304 kb on + strand at 5948.304 kb on + strand at 5948.304 kb on + strand at 5948.305 kb on - strand at 5948.305 kb on - strand at 5948.305 kb on - strand at 5948.305 kb on - strand at 5948.305 kb on - strand at 5948.393 kb on + strand, within AO353_27175 at 5948.393 kb on + strand, within AO353_27175 at 5948.393 kb on + strand, within AO353_27175 at 5948.393 kb on + strand, within AO353_27175 at 5948.393 kb on + strand, within AO353_27175 at 5948.394 kb on - strand, within AO353_27175 at 5948.394 kb on - strand, within AO353_27175 at 5948.421 kb on + strand, within AO353_27175 at 5948.422 kb on - strand, within AO353_27175 at 5948.422 kb on - strand, within AO353_27175 at 5948.466 kb on + strand, within AO353_27175 at 5948.466 kb on + strand, within AO353_27175 at 5948.466 kb on + strand, within AO353_27175 at 5948.466 kb on + strand, within AO353_27175 at 5948.466 kb on + strand, within AO353_27175 at 5948.466 kb on + strand, within AO353_27175 at 5948.466 kb on + strand, within AO353_27175 at 5948.467 kb on - strand, within AO353_27175 at 5948.520 kb on + strand, within AO353_27175 at 5948.520 kb on + strand, within AO353_27175 at 5948.520 kb on + strand, within AO353_27175 at 5948.520 kb on + strand, within AO353_27175 at 5948.521 kb on - strand, within AO353_27175 at 5948.521 kb on - strand, within AO353_27175 at 5948.530 kb on + strand, within AO353_27175 at 5948.530 kb on + strand, within AO353_27175 at 5948.530 kb on + strand, within AO353_27175 at 5948.531 kb on - strand, within AO353_27175 at 5948.531 kb on - strand, within AO353_27175 at 5948.531 kb on - strand, within AO353_27175 at 5948.531 kb on - strand, within AO353_27175 at 5948.531 kb on - strand, within AO353_27175 at 5948.567 kb on + strand, within AO353_27175 at 5948.567 kb on + strand, within AO353_27175 at 5948.567 kb on + strand, within AO353_27175 at 5948.567 kb on + strand, within AO353_27175 at 5948.567 kb on + strand, within AO353_27175 at 5948.567 kb on + strand, within AO353_27175 at 5948.567 kb on + strand, within AO353_27175 at 5948.567 kb on + strand, within AO353_27175 at 5948.567 kb on + strand, within AO353_27175 at 5948.567 kb on + strand, within AO353_27175 at 5948.568 kb on - strand, within AO353_27175 at 5948.568 kb on - strand, within AO353_27175 at 5948.568 kb on - strand, within AO353_27175 at 5948.568 kb on - strand, within AO353_27175 at 5948.568 kb on - strand, within AO353_27175 at 5948.568 kb on - strand, within AO353_27175 at 5948.568 kb on - strand, within AO353_27175 at 5948.568 kb on - strand, within AO353_27175 at 5948.568 kb on - strand, within AO353_27175 at 5948.568 kb on - strand, within AO353_27175 at 5948.568 kb on - strand, within AO353_27175 at 5948.568 kb on - strand, within AO353_27175 at 5948.571 kb on + strand, within AO353_27175 at 5948.571 kb on + strand, within AO353_27175 at 5948.571 kb on + strand, within AO353_27175 at 5948.571 kb on + strand, within AO353_27175 at 5948.572 kb on - strand, within AO353_27175 at 5948.572 kb on - strand, within AO353_27175 at 5948.572 kb on - strand, within AO353_27175 at 5948.572 kb on - strand, within AO353_27175 at 5948.572 kb on - strand, within AO353_27175 at 5948.572 kb on - strand, within AO353_27175 at 5948.618 kb on - strand at 5948.618 kb on - strand at 5948.618 kb on - strand at 5948.629 kb on + strand at 5948.630 kb on - strand at 5948.630 kb on - strand at 5948.768 kb on + strand, within AO353_27180 at 5948.768 kb on + strand, within AO353_27180 at 5948.768 kb on + strand, within AO353_27180 at 5948.769 kb on - strand, within AO353_27180 at 5948.769 kb on - strand, within AO353_27180 at 5948.769 kb on - strand, within AO353_27180 at 5948.906 kb on + strand, within AO353_27180 at 5948.907 kb on - strand, within AO353_27180 at 5948.907 kb on - strand, within AO353_27180 at 5948.960 kb on + strand at 5948.960 kb on + strand at 5948.969 kb on + strand at 5948.969 kb on + strand at 5948.970 kb on - strand at 5948.999 kb on + strand at 5949.000 kb on - strand at 5949.030 kb on + strand at 5949.030 kb on + strand at 5949.030 kb on + strand at 5949.031 kb on - strand at 5949.031 kb on - strand at 5949.031 kb on - strand at 5949.032 kb on + strand at 5949.033 kb on - strand at 5949.033 kb on - strand at 5949.033 kb on - strand at 5949.033 kb on - strand at 5949.033 kb on - strand at 5949.108 kb on + strand at 5949.174 kb on + strand, within AO353_27185 at 5949.174 kb on + strand, within AO353_27185 at 5949.175 kb on - strand, within AO353_27185 at 5949.175 kb on - strand, within AO353_27185 at 5949.254 kb on + strand, within AO353_27185 at 5949.254 kb on + strand, within AO353_27185 at 5949.254 kb on + strand, within AO353_27185 at 5949.254 kb on + strand, within AO353_27185 at 5949.255 kb on - strand, within AO353_27185 at 5949.305 kb on - strand, within AO353_27185 at 5949.327 kb on + strand, within AO353_27185 at 5949.327 kb on + strand, within AO353_27185 at 5949.521 kb on + strand at 5949.522 kb on - strand at 5949.568 kb on + strand at 5949.645 kb on + strand, within AO353_27190 at 5949.646 kb on - strand, within AO353_27190 at 5949.646 kb on - strand, within AO353_27190 at 5949.686 kb on + strand, within AO353_27190 at 5949.687 kb on - strand, within AO353_27190 at 5949.716 kb on + strand, within AO353_27190 at 5949.716 kb on + strand, within AO353_27190 at 5949.760 kb on - strand, within AO353_27190 at 5949.760 kb on - strand, within AO353_27190 at 5949.809 kb on - strand at 5949.823 kb on + strand at 5949.824 kb on - strand at 5949.958 kb on - strand at 5949.994 kb on + strand at 5950.104 kb on + strand at 5950.104 kb on + strand at 5950.104 kb on + strand at 5950.105 kb on - strand at 5950.109 kb on + strand at 5950.110 kb on - strand at 5950.110 kb on - strand at 5950.110 kb on - strand at 5950.110 kb on - strand at 5950.159 kb on + strand at 5950.277 kb on + strand at 5950.277 kb on + strand at 5950.278 kb on - strand at 5950.297 kb on + strand at 5950.297 kb on + strand at 5950.297 kb on + strand at 5950.297 kb on + strand at 5950.297 kb on + strand at 5950.298 kb on - strand at 5950.322 kb on + strand at 5950.322 kb on + strand at 5950.322 kb on + strand at 5950.322 kb on + strand at 5950.322 kb on + strand at 5950.322 kb on + strand at 5950.323 kb on - strand at 5950.323 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Nalidixic 0.004 mg/ml remove 5,948,100 - AO353_27170 0.70 -0.3 5,948,100 - AO353_27170 0.70 -1.4 5,948,100 - AO353_27170 0.70 +1.0 5,948,141 + AO353_27170 0.77 +0.7 5,948,141 + AO353_27170 0.77 -2.1 5,948,141 + AO353_27170 0.77 +0.7 5,948,162 + AO353_27170 0.80 -0.6 5,948,162 + AO353_27170 0.80 +1.5 5,948,162 + AO353_27170 0.80 -1.1 5,948,163 - +0.7 5,948,165 + AO353_27170 0.81 -1.7 5,948,165 + AO353_27170 0.81 -1.1 5,948,165 + AO353_27170 0.81 -0.3 5,948,165 + AO353_27170 0.81 -0.0 5,948,165 + AO353_27170 0.81 +0.7 5,948,166 - AO353_27170 0.81 -0.3 5,948,166 - AO353_27170 0.81 +1.1 5,948,166 - AO353_27170 0.81 -1.2 5,948,166 - AO353_27170 0.81 +0.4 5,948,166 - AO353_27170 0.81 -1.7 5,948,191 + AO353_27170 0.85 +0.1 5,948,191 + +0.7 5,948,191 + AO353_27170 0.85 -2.9 5,948,191 + AO353_27170 0.85 -0.3 5,948,191 + AO353_27170 0.85 -1.9 5,948,192 - AO353_27170 0.85 +1.7 5,948,192 - AO353_27170 0.85 +2.3 5,948,192 - AO353_27170 0.85 +1.1 5,948,192 - AO353_27170 0.85 -0.2 5,948,269 + +0.7 5,948,278 + -0.4 5,948,278 + +0.7 5,948,278 + -0.9 5,948,278 + -0.6 5,948,279 - +2.3 5,948,279 - +1.3 5,948,279 - -0.3 5,948,279 - +0.3 5,948,279 - +0.3 5,948,304 + +0.2 5,948,304 + -0.9 5,948,304 + -0.3 5,948,304 + +0.7 5,948,304 + +0.9 5,948,305 - -0.6 5,948,305 - -0.9 5,948,305 - +1.1 5,948,305 - +0.9 5,948,305 - +1.5 5,948,393 + AO353_27175 0.27 -0.9 5,948,393 + AO353_27175 0.27 -0.1 5,948,393 + AO353_27175 0.27 +0.5 5,948,393 + AO353_27175 0.27 +1.3 5,948,393 + AO353_27175 0.27 -0.0 5,948,394 - AO353_27175 0.27 +0.3 5,948,394 - AO353_27175 0.27 +0.7 5,948,421 + AO353_27175 0.35 -0.0 5,948,422 - AO353_27175 0.35 -0.6 5,948,422 - AO353_27175 0.35 +0.2 5,948,466 + AO353_27175 0.49 +1.5 5,948,466 + AO353_27175 0.49 -1.1 5,948,466 + AO353_27175 0.49 -0.8 5,948,466 + AO353_27175 0.49 -0.4 5,948,466 + AO353_27175 0.49 -1.3 5,948,466 + AO353_27175 0.49 +1.7 5,948,466 + AO353_27175 0.49 -0.6 5,948,467 - AO353_27175 0.49 -0.9 5,948,520 + AO353_27175 0.65 -0.3 5,948,520 + AO353_27175 0.65 +0.1 5,948,520 + AO353_27175 0.65 -1.6 5,948,520 + AO353_27175 0.65 -2.3 5,948,521 - AO353_27175 0.65 +0.3 5,948,521 - AO353_27175 0.65 -1.3 5,948,530 + AO353_27175 0.68 -0.9 5,948,530 + AO353_27175 0.68 +0.7 5,948,530 + AO353_27175 0.68 -0.3 5,948,531 - AO353_27175 0.68 -0.1 5,948,531 - AO353_27175 0.68 +0.1 5,948,531 - AO353_27175 0.68 +0.4 5,948,531 - AO353_27175 0.68 +0.2 5,948,531 - AO353_27175 0.68 -2.1 5,948,567 + AO353_27175 0.79 -0.9 5,948,567 + AO353_27175 0.79 -0.5 5,948,567 + AO353_27175 0.79 -2.1 5,948,567 + AO353_27175 0.79 -2.0 5,948,567 + AO353_27175 0.79 -0.3 5,948,567 + AO353_27175 0.79 +0.2 5,948,567 + AO353_27175 0.79 +0.7 5,948,567 + AO353_27175 0.79 -0.4 5,948,567 + AO353_27175 0.79 -0.5 5,948,567 + AO353_27175 0.79 +1.7 5,948,568 - AO353_27175 0.79 +0.2 5,948,568 - AO353_27175 0.79 +0.3 5,948,568 - AO353_27175 0.79 +0.9 5,948,568 - AO353_27175 0.79 +0.9 5,948,568 - AO353_27175 0.79 +0.2 5,948,568 - AO353_27175 0.79 -0.3 5,948,568 - AO353_27175 0.79 -0.0 5,948,568 - AO353_27175 0.79 -0.4 5,948,568 - AO353_27175 0.79 -1.1 5,948,568 - AO353_27175 0.79 -0.1 5,948,568 - AO353_27175 0.79 +0.1 5,948,568 - AO353_27175 0.79 -1.3 5,948,571 + AO353_27175 0.80 +0.7 5,948,571 + AO353_27175 0.80 -2.7 5,948,571 + AO353_27175 0.80 +0.1 5,948,571 + AO353_27175 0.80 -2.7 5,948,572 - AO353_27175 0.80 -0.7 5,948,572 - AO353_27175 0.80 +0.3 5,948,572 - AO353_27175 0.80 -0.7 5,948,572 - AO353_27175 0.80 +1.0 5,948,572 - AO353_27175 0.80 +1.3 5,948,572 - AO353_27175 0.80 -1.6 5,948,618 - +1.1 5,948,618 - -0.6 5,948,618 - +1.7 5,948,629 + -0.3 5,948,630 - -0.3 5,948,630 - +0.4 5,948,768 + AO353_27180 0.40 +1.7 5,948,768 + AO353_27180 0.40 -2.3 5,948,768 + AO353_27180 0.40 -0.9 5,948,769 - AO353_27180 0.41 +0.2 5,948,769 - AO353_27180 0.41 -0.7 5,948,769 - AO353_27180 0.41 -0.7 5,948,906 + AO353_27180 0.84 -0.6 5,948,907 - AO353_27180 0.84 -0.8 5,948,907 - AO353_27180 0.84 +0.7 5,948,960 + +0.7 5,948,960 + -0.5 5,948,969 + -1.6 5,948,969 + -1.9 5,948,970 - -1.4 5,948,999 + +1.1 5,949,000 - -0.6 5,949,030 + +0.0 5,949,030 + +0.4 5,949,030 + -0.0 5,949,031 - +0.7 5,949,031 - -2.1 5,949,031 - -0.7 5,949,032 + -1.6 5,949,033 - +1.0 5,949,033 - -2.1 5,949,033 - -0.5 5,949,033 - +2.3 5,949,033 - +0.7 5,949,108 + +1.1 5,949,174 + AO353_27185 0.28 +0.5 5,949,174 + AO353_27185 0.28 -0.9 5,949,175 - AO353_27185 0.28 -0.3 5,949,175 - AO353_27185 0.28 +0.0 5,949,254 + AO353_27185 0.51 -0.3 5,949,254 + AO353_27185 0.51 -0.9 5,949,254 + AO353_27185 0.51 -0.3 5,949,254 + AO353_27185 0.51 +0.1 5,949,255 - AO353_27185 0.52 -1.4 5,949,305 - AO353_27185 0.66 -0.8 5,949,327 + AO353_27185 0.73 -0.9 5,949,327 + AO353_27185 0.73 +1.3 5,949,521 + -1.3 5,949,522 - +0.2 5,949,568 + -0.1 5,949,645 + AO353_27190 0.34 +0.4 5,949,646 - AO353_27190 0.34 -2.0 5,949,646 - AO353_27190 0.34 +0.7 5,949,686 + AO353_27190 0.52 -1.6 5,949,687 - AO353_27190 0.53 -1.0 5,949,716 + AO353_27190 0.66 -1.1 5,949,716 + AO353_27190 0.66 +0.1 5,949,760 - AO353_27190 0.86 +1.1 5,949,760 - AO353_27190 0.86 -0.3 5,949,809 - -0.9 5,949,823 + +1.0 5,949,824 - -1.3 5,949,958 - +0.7 5,949,994 + -0.5 5,950,104 + -0.5 5,950,104 + +0.5 5,950,104 + -0.0 5,950,105 - -1.9 5,950,109 + +0.1 5,950,110 - -1.9 5,950,110 - +0.7 5,950,110 - +0.1 5,950,110 - -1.1 5,950,159 + -3.1 5,950,277 + -0.0 5,950,277 + +0.6 5,950,278 - +0.7 5,950,297 + +0.7 5,950,297 + +1.3 5,950,297 + -0.4 5,950,297 + +0.4 5,950,297 + +0.0 5,950,298 - +0.7 5,950,322 + -0.0 5,950,322 + +0.6 5,950,322 + -1.0 5,950,322 + +1.6 5,950,322 + -0.0 5,950,322 + +2.7 5,950,323 - -0.3 5,950,323 - +0.6
Or see this region's nucleotide sequence