Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_23835

Experiment: Nalidixic 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.004 mg/ml
5,231,877	-		AO353_23830	0.19	-1.9
5,232,107	+		AO353_23830	0.41	+0.7
5,232,107	+		AO353_23830	0.41	-1.3
5,232,108	-		AO353_23830	0.41	-0.7
5,232,400	+		AO353_23830	0.69	+0.4
5,232,400	+		AO353_23830	0.69	-0.5
5,232,400	+		AO353_23830	0.69	-0.0
5,232,400	+		AO353_23830	0.69	+0.1
5,232,400	+		AO353_23830	0.69	-0.3
5,232,401	-		AO353_23830	0.69	+1.7
5,232,401	-		AO353_23830	0.69	-0.7
5,232,401	-		AO353_23830	0.69	-2.3
5,232,401	-		AO353_23830	0.69	-0.6
5,232,522	+		AO353_23830	0.80	-0.3
5,232,522	+		AO353_23830	0.80	+2.7
5,232,670	+				-1.6
5,232,670	+				+0.7
5,232,670	+				+0.7
5,232,670	+				-1.1
5,232,670	+				+0.4
5,232,670	+				-0.1
5,232,671	-				+0.1
5,232,671	-				-0.3
5,232,672	+				+0.1
5,232,672	+				-0.2
5,232,673	-				+0.7
5,232,673	-				+0.5
5,232,718	+				+0.7
5,232,728	-				+1.1
5,232,787	+				+0.7
5,232,787	+				-1.1
5,232,787	+				+1.7
5,232,788	-				-0.3
5,232,788	-				-0.3
5,232,807	+				-0.3
5,232,808	-				+0.7
5,232,822	+				-1.3
5,232,822	+				+0.4
5,232,918	+		AO353_23835	0.26	+0.3
5,232,918	+		AO353_23835	0.26	+0.7
5,232,959	+		AO353_23835	0.39	+0.7
5,232,960	-		AO353_23835	0.39	-0.3
5,232,960	-		AO353_23835	0.39	-0.3
5,232,960	-		AO353_23835	0.39	-0.3
5,232,960	-		AO353_23835	0.39	+1.1
5,233,197	+				-0.3
5,233,198	-				-1.9
5,233,198	-				-0.9
5,233,276	+				-0.2
5,233,276	+				+0.3
5,233,277	-				+0.1
5,233,277	-				+0.2
5,233,277	-				-0.3
5,233,277	-				+0.7
5,233,277	-				-0.6
5,233,277	-				-0.9
5,233,277	-				-0.3
5,233,277	-				-0.3
5,233,277	-				+2.7
5,233,277	-				-0.9
5,233,283	+				-1.1
5,233,283	+				+1.1
5,233,283	+				-0.3
5,233,283	+				-1.9
5,233,283	+				+0.7
5,233,283	+				-1.0
5,233,283	+				+0.7
5,233,283	+				-0.9
5,233,284	-				-1.5
5,233,284	-				-0.3
5,233,284	-				+0.9
5,233,300	+				-0.9
5,233,311	+				-0.7
5,233,311	+				-0.1
5,233,311	+				-0.3
5,233,312	-				-0.3
5,233,415	-		AO353_23840	0.38	+1.2
5,233,415	-		AO353_23840	0.38	+0.9
5,233,462	+		AO353_23840	0.57	-0.1
5,233,463	-		AO353_23840	0.57	-0.7
5,233,463	-		AO353_23840	0.57	-1.3
5,233,520	+		AO353_23840	0.80	-0.3
5,233,521	-		AO353_23840	0.80	-0.1
5,233,521	-		AO353_23840	0.80	+0.2
5,233,528	+		AO353_23840	0.83	+0.5
5,233,528	+		AO353_23840	0.83	-1.3
5,233,528	+		AO353_23840	0.83	+0.7
5,233,529	-		AO353_23840	0.83	-0.7
5,233,529	-		AO353_23840	0.83	-0.1
5,233,529	-		AO353_23840	0.83	+1.7
5,233,568	+				+0.7
5,233,568	+				-0.3
5,233,568	+				-0.7
5,233,569	-				+0.4
5,233,569	-				-0.3
5,233,569	-				+1.4
5,233,605	+				+0.0
5,233,605	+				+1.2
5,233,605	+				-0.8
5,233,606	-				+0.7
5,233,606	-				-0.3
5,233,606	-				+0.4
5,233,941	+		AO353_23845	0.38	+0.7
5,233,941	+		AO353_23845	0.38	+0.7
5,233,941	+		AO353_23845	0.38	-1.1
5,233,941	+		AO353_23845	0.38	+0.2
5,233,942	-		AO353_23845	0.38	+2.2
5,233,942	-		AO353_23845	0.38	-0.9
5,233,942	-		AO353_23845	0.38	+0.5