Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_22220

Experiment: Nalidixic 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.004 mg/ml
4,864,701	+				-0.3
4,864,797	+				-0.4
4,864,798	-				+2.5
4,864,798	-				-0.9
4,864,798	-				-0.1
4,864,850	+				-0.3
4,864,850	+				-1.4
4,864,850	+				-0.3
4,864,881	+				-0.6
4,864,881	+				+0.3
4,864,881	+				-0.1
4,864,881	+				+0.2
4,864,881	+				-1.4
4,864,881	+				-0.5
4,864,882	-				+0.6
4,864,882	-				+0.3
4,864,882	-				-0.3
4,864,882	-				+0.2
4,864,885	-				+0.0
4,864,885	-				-0.3
4,864,885	-				-1.6
4,864,885	-				+2.1
4,864,894	+				+0.2
4,864,976	+				-1.1
4,864,977	-				+0.0
4,865,083	-		AO353_22215	0.35	-0.6
4,865,083	-		AO353_22215	0.35	+0.0
4,865,089	+		AO353_22215	0.38	-3.0
4,865,089	+		AO353_22215	0.38	-1.5
4,865,089	+		AO353_22215	0.38	-1.3
4,865,133	+		AO353_22215	0.59	-1.0
4,865,193	-		AO353_22215	0.88	-0.1
4,865,345	-				-0.3
4,865,380	+				-1.3
4,865,381	-				-0.2
4,865,381	-				-1.8
4,865,381	-				+0.2
4,865,381	-				-0.3
4,865,386	+				+0.2
4,865,386	+				-1.2
4,865,386	+				-0.4
4,865,386	+				-1.6
4,865,387	-				-1.3
4,865,387	-				-0.8
4,865,480	+				-0.3
4,865,481	-				+0.2
4,865,522	+				+0.0
4,865,522	+				-1.4
4,865,522	+				+0.1
4,865,523	-				+0.5
4,865,523	-				+0.4
4,865,524	+				+0.7
4,865,525	-				-1.1
4,865,565	-				+0.7
4,865,579	+				-1.8
4,865,588	+				-1.7
4,865,588	+				-0.1
4,865,589	-				+1.2
4,865,622	-				-1.3
4,865,918	-		AO353_22220	0.61	-2.1
4,865,989	+		AO353_22220	0.79	-0.8
4,865,993	+		AO353_22220	0.80	-1.1
4,865,993	+		AO353_22220	0.80	-0.4
4,865,993	+		AO353_22220	0.80	+1.2
4,865,993	+		AO353_22220	0.80	-1.7
4,865,993	+		AO353_22220	0.80	+0.7
4,865,994	-		AO353_22220	0.81	-1.6
4,865,994	-		AO353_22220	0.81	-1.1
4,865,994	-		AO353_22220	0.81	-2.1
4,865,994	-		AO353_22220	0.81	+1.5
4,866,088	+				+1.2
4,866,089	-				-1.8
4,866,153	+				-0.1
4,866,153	+				+0.5
4,866,155	+				+1.2
4,866,156	-				+0.7
4,866,156	-				+0.2
4,866,221	-		AO353_22225	0.16	+0.6
4,866,237	+		AO353_22225	0.18	+0.7
4,866,238	-				+0.7
4,866,299	-				+1.1
4,866,299	-		AO353_22225	0.24	+0.5
4,866,306	+		AO353_22225	0.25	-0.6
4,866,306	+		AO353_22225	0.25	-1.6
4,866,306	+		AO353_22225	0.25	+0.0
4,866,306	+		AO353_22225	0.25	-0.5
4,866,306	+		AO353_22225	0.25	-0.6
4,866,306	+		AO353_22225	0.25	-0.3
4,866,306	+		AO353_22225	0.25	-1.0
4,866,307	-		AO353_22225	0.25	-0.2
4,866,307	-		AO353_22225	0.25	-0.5
4,866,307	-				+0.7
4,866,316	+		AO353_22225	0.26	+0.7
4,866,372	+		AO353_22225	0.32	-0.6
4,866,373	-		AO353_22225	0.32	-1.6
4,866,412	+		AO353_22225	0.36	+0.7
4,866,412	+		AO353_22225	0.36	+1.3
4,866,413	-		AO353_22225	0.36	+0.3
4,866,499	+		AO353_22225	0.46	+1.3
4,866,500	-		AO353_22225	0.46	+0.7
4,866,541	+		AO353_22225	0.50	+0.1
4,866,542	-		AO353_22225	0.50	-0.8
4,866,597	+		AO353_22225	0.56	-0.3
4,866,598	-		AO353_22225	0.56	-2.6
4,866,598	-		AO353_22225	0.56	+1.2
4,866,691	-		AO353_22225	0.66	+0.2
4,866,693	+		AO353_22225	0.66	+0.2
4,866,714	+		AO353_22225	0.68	+0.2
4,866,722	+		AO353_22225	0.69	-0.8
4,866,722	+		AO353_22225	0.69	+0.3
4,866,722	+		AO353_22225	0.69	-0.3
4,866,735	+		AO353_22225	0.71	+0.5
4,866,770	+		AO353_22225	0.74	-1.0
4,866,770	+		AO353_22225	0.74	+1.1
4,866,770	+		AO353_22225	0.74	-0.8
4,866,771	-		AO353_22225	0.75	-0.8
4,866,819	+		AO353_22225	0.80	+1.2
4,866,858	+		AO353_22225	0.84	+0.9
4,866,858	+		AO353_22225	0.84	-0.8
4,866,858	+		AO353_22225	0.84	+0.5
4,866,858	+		AO353_22225	0.84	-1.2
4,866,859	-		AO353_22225	0.84	-0.4
4,866,884	+		AO353_22225	0.87	+1.1
4,866,884	+		AO353_22225	0.87	+0.5
4,866,913	+		AO353_22225	0.90	+0.1
4,866,913	+		AO353_22225	0.90	+0.7
4,866,914	-		AO353_22225	0.90	+0.1
4,866,970	-				+1.7
4,866,973	+				-3.5
4,866,973	+				+0.3
4,867,007	+				+0.1
4,867,063	-				-0.3
4,867,065	+				+0.7
4,867,065	+				+1.1
4,867,066	-				-2.3
4,867,066	-				-0.6
4,867,066	-				+0.7