Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_14385

Experiment: Nalidixic 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.004 mg/ml
3,188,619	+				+1.0
3,188,619	+				+1.5
3,188,619	+				-0.6
3,188,620	-				-0.3
3,188,620	-				+0.2
3,188,653	+				-0.5
3,188,653	+				-0.1
3,188,653	+				-1.4
3,188,653	+				+0.8
3,188,654	-				+1.7
3,188,665	+				-0.8
3,188,666	-				+2.0
3,188,666	-				+0.1
3,188,666	-				+0.7
3,188,666	-				-1.1
3,188,666	-				-1.1
3,188,667	+				+0.8
3,188,667	+				-0.3
3,188,668	-				+0.2
3,188,668	-				-0.8
3,188,668	-				-0.9
3,188,668	-				+0.0
3,188,668	-				+0.6
3,188,668	-				-0.1
3,188,675	+				-1.8
3,188,675	+				+1.2
3,188,676	-				+0.2
3,188,676	-				+0.1
3,188,676	-				+0.2
3,188,676	-				-1.9
3,188,715	+				+1.2
3,188,716	-				-1.5
3,188,850	+		AO353_14380	0.16	-0.1
3,188,850	+		AO353_14380	0.16	+0.6
3,188,851	-		AO353_14380	0.16	-1.0
3,188,961	+		AO353_14380	0.29	-0.8
3,189,042	-		AO353_14380	0.38	-0.6
3,189,042	-		AO353_14380	0.38	-0.6
3,189,042	-		AO353_14380	0.38	-1.1
3,189,042	-		AO353_14380	0.38	+1.0
3,189,363	+		AO353_14380	0.75	-1.3
3,189,363	+		AO353_14380	0.75	+0.7
3,189,364	-		AO353_14380	0.75	+1.2
3,189,364	-		AO353_14380	0.75	-0.1
3,189,364	-		AO353_14380	0.75	+0.6
3,189,506	-				+0.7
3,189,506	-				-1.3
3,189,506	-				+0.2
3,189,629	+				+2.2
3,189,629	+				+1.4
3,189,630	-				+0.2
3,189,630	-				-1.2
3,189,730	+		AO353_14385	0.20	-0.3
3,189,730	+		AO353_14385	0.20	+0.7
3,189,731	-		AO353_14385	0.20	+0.7
3,189,921	+		AO353_14385	0.44	+0.1
3,189,921	+		AO353_14385	0.44	+1.2
3,189,921	+		AO353_14385	0.44	+0.1
3,189,922	-		AO353_14385	0.44	-1.3
3,189,923	+		AO353_14385	0.44	+0.7
3,189,923	+		AO353_14385	0.44	+1.2
3,189,924	-		AO353_14385	0.44	+0.9
3,190,104	-		AO353_14385	0.67	-0.1
3,190,172	+		AO353_14385	0.75	+1.2
3,190,173	-		AO353_14385	0.75	-0.3
3,190,173	-		AO353_14385	0.75	+0.0
3,190,291	-		AO353_14385	0.90	+0.4
3,190,298	+				-1.6
3,190,298	+				+2.0
3,190,298	+				+0.4
3,190,298	+				-0.3
3,190,298	+				+0.7
3,190,299	-				+2.0
3,190,299	-				+0.1
3,190,362	+				+1.2
3,190,363	-				-0.5
3,190,363	-				-1.7
3,190,363	-				-0.9
3,190,363	-				+1.2
3,190,373	+				+0.4
3,190,373	+				+0.9
3,190,373	+				-0.3
3,190,373	+				-1.3
3,190,373	+				-0.6
3,190,373	+				-1.1
3,190,373	+				-0.3
3,190,373	+				-0.6
3,190,374	-				+0.2
3,190,374	-				+0.0
3,190,374	-				+0.7
3,190,374	-				+0.1
3,190,374	-				-1.3
3,190,374	-				+0.8
3,190,374	-				+0.4
3,190,374	-				+0.1
3,190,404	+				-1.1
3,190,405	-				-0.2
3,190,434	+				-0.4
3,190,434	+				+0.6
3,190,435	-				+1.1
3,190,435	-				-0.5
3,190,464	+				+0.9
3,190,464	+				-0.3
3,190,464	+				+0.2
3,190,464	+				+2.5
3,190,465	-				-0.9
3,190,465	-				+2.2
3,190,465	-				+0.1
3,190,465	-				-1.6
3,190,486	+				-0.8
3,190,486	+				-0.5
3,190,486	+				+0.7
3,190,486	+				+0.7
3,190,487	-				-0.4
3,190,487	-				-1.3
3,190,487	-				-0.5
3,190,515	+				-0.5
3,190,515	+				-0.1
3,190,515	+				-0.7
3,190,515	+				-2.0
3,190,515	+				+0.2
3,190,516	-				-1.6
3,190,516	-				-1.3
3,190,516	-				+0.1
3,190,516	-				+0.8
3,190,517	+				+0.9
3,190,517	+				-1.9
3,190,517	+				+1.1
3,190,517	+				+0.1
3,190,517	+				+0.2
3,190,517	+				+2.2
3,190,517	+				+1.5
3,190,517	+				+1.7
3,190,517	+				-1.9
3,190,518	-				+0.7
3,190,518	-				-0.8
3,190,518	-				-1.6
3,190,518	-				-0.1
3,190,518	-				+0.2
3,190,566	+				+0.2
3,190,566	+				+0.2
3,190,567	-				-1.3
3,190,590	-				-1.6
3,190,607	+				+0.9
3,190,607	+				-1.6
3,190,607	+				+1.8
3,190,607	+				-1.1
3,190,607	+				+2.4
3,190,607	+				-2.1
3,190,607	+				-0.0
3,190,607	+				-1.2
3,190,607	+				-0.3
3,190,607	+				+1.2
3,190,607	+				+0.0
3,190,608	-				-1.3
3,190,608	-				+0.7
3,190,608	-				-1.8
3,190,608	-				+0.1
3,190,608	-				-0.0
3,190,608	-				+1.2
3,190,608	-				+0.9
3,190,608	-				-0.9
3,190,608	-				+0.8
3,190,608	-				-1.6
3,190,615	+				+0.8
3,190,615	+				+0.5
3,190,616	-				+1.2
3,190,697	+				-0.3
3,190,698	-				+1.2
3,190,698	-				+0.2
3,190,698	-				-0.6
3,191,166	-				+0.4
3,191,166	-				-1.3
3,191,166	-				-1.6
3,191,166	-				-0.1
3,191,166	-				-0.0
3,191,166	-				-0.6
3,191,166	-				+1.1
3,191,166	-				+0.8
3,191,185	-				-1.3
3,191,204	+				-1.3
3,191,252	-				+2.1
3,191,252	-				-0.3
3,191,335	-		AO353_14395	0.11	-0.6