Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_10455

Experiment: Nalidixic 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.004 mg/ml
2,288,852	-				-0.5
2,288,972	-				-0.1
2,288,972	-				+1.3
2,288,972	-				+1.1
2,288,972	-				+0.0
2,289,008	-				+0.7
2,289,008	-				-0.2
2,289,008	-				+0.9
2,289,008	-				+1.3
2,289,008	-				-0.5
2,289,008	-				+0.8
2,289,008	-				+0.5
2,289,008	-				-0.2
2,289,008	-				+0.3
2,289,008	-				-2.2
2,289,008	-				+0.5
2,289,008	-				+0.4
2,289,008	-				-0.4
2,289,009	+				+0.8
2,289,009	+				-1.0
2,289,010	-				-0.6
2,289,028	-				+0.1
2,289,028	-				+0.4
2,289,028	-				-2.3
2,289,078	+				-1.9
2,289,086	-				+1.1
2,289,086	-				-0.3
2,289,101	+				-0.1
2,289,118	+				-1.5
2,289,118	+				+2.0
2,289,118	+				-0.2
2,289,118	+				+1.5
2,289,125	-				-0.2
2,289,130	+				+0.2
2,289,133	-				-1.8
2,289,152	+				-1.4
2,289,153	-				+0.0
2,289,153	-				-0.4
2,289,158	+				+0.2
2,289,159	-				+0.7
2,289,159	-				+0.3
2,289,159	-				+0.3
2,289,159	-				-1.1
2,289,159	-				-1.3
2,289,159	-				-0.7
2,289,162	+				+0.3
2,289,162	+				+0.2
2,289,162	+				-0.2
2,289,163	-				-0.5
2,289,163	-				-0.9
2,289,170	+				+0.1
2,289,171	-				-1.1
2,289,171	-				-0.2
2,289,183	+				-0.8
2,289,239	+				-0.7
2,289,239	+				-2.1
2,289,239	+				-1.4
2,289,239	+				-1.5
2,289,239	+				+0.7
2,289,239	+				-1.7
2,289,239	+				-0.1
2,289,239	+				-2.5
2,289,239	+				-0.3
2,289,240	-				+0.2
2,289,304	-		AO353_10450	0.18	-0.5
2,289,326	+		AO353_10450	0.26	-0.4
2,289,327	-		AO353_10450	0.26	-2.4
2,289,339	+		AO353_10450	0.30	+0.8
2,289,434	+		AO353_10450	0.64	+0.2
2,289,469	+		AO353_10450	0.76	-2.2
2,289,469	+		AO353_10450	0.76	-0.8
2,289,469	+		AO353_10450	0.76	-0.3
2,289,469	+		AO353_10450	0.76	+2.0
2,289,469	+		AO353_10450	0.76	+0.4
2,289,469	+		AO353_10450	0.76	-0.5
2,289,470	-		AO353_10450	0.77	-1.0
2,289,470	-		AO353_10450	0.77	-0.2
2,289,470	-		AO353_10450	0.77	-0.1
2,289,470	-		AO353_10450	0.77	+3.1
2,289,470	-		AO353_10450	0.77	+0.4
2,289,470	-		AO353_10450	0.77	-0.1
2,289,470	-		AO353_10450	0.77	-0.2
2,289,539	+				+0.7
2,289,539	+				+0.9
2,289,539	+				+1.3
2,289,540	-				-2.1
2,289,540	-				+0.5
2,289,540	-				+0.2
2,289,540	-				-0.2
2,289,540	-				+1.3
2,289,540	-				-0.6
2,289,540	-				+0.2
2,289,540	-				-0.1
2,289,770	+		AO353_10455	0.17	+0.9
2,290,119	+		AO353_10455	0.42	+1.5
2,290,404	-		AO353_10455	0.63	+1.5
2,290,437	+		AO353_10455	0.66	+0.9
2,290,710	-		AO353_10455	0.85	+2.1
2,290,984	+				-0.5
2,290,985	-				-0.3
2,290,985	-				+0.0
2,290,985	-				+1.2
2,290,985	-				+0.3
2,290,985	-				-0.1
2,290,985	-				+0.2
2,290,985	-				-0.8
2,290,985	-				-0.1
2,290,985	-				-1.0
2,290,985	-				+0.8
2,290,985	-				+1.0
2,290,985	-				-0.2
2,290,985	-				-0.8
2,290,985	-				-2.2
2,290,985	-				-1.1
2,290,985	-				-0.3
2,290,985	-				+0.2
2,290,985	-				-1.5
2,290,985	-				-0.8
2,290,985	-				-1.1
2,290,985	-				+0.6
2,290,990	-				+0.5
2,290,990	-				-0.1
2,291,024	-				+0.7
2,291,024	-				-1.7
2,291,024	-				-0.6
2,291,024	-				+0.3
2,291,024	-				-1.7
2,291,024	-				-0.6
2,291,024	-				+0.5
2,291,024	-				+0.3
2,291,024	-				-2.0
2,291,024	-				+0.0