Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_06525

Experiment: Nalidixic 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.004 mg/ml
1,450,750	+		AO353_06515	0.42	-0.6
1,450,844	+		AO353_06515	0.55	-0.0
1,450,844	+		AO353_06515	0.55	-0.4
1,450,844	+		AO353_06515	0.55	-1.2
1,450,844	+		AO353_06515	0.55	+0.4
1,450,845	-		AO353_06515	0.55	+1.2
1,450,845	-		AO353_06515	0.55	+2.8
1,450,845	-		AO353_06515	0.55	-0.3
1,450,856	-		AO353_06515	0.56	+2.5
1,450,856	-		AO353_06515	0.56	-0.8
1,450,856	-		AO353_06515	0.56	+0.0
1,450,858	+		AO353_06515	0.57	+0.3
1,450,858	+		AO353_06515	0.57	-0.2
1,450,858	+		AO353_06515	0.57	-0.0
1,450,858	+		AO353_06515	0.57	+1.2
1,450,858	+		AO353_06515	0.57	+1.4
1,450,858	+		AO353_06515	0.57	-1.1
1,450,858	+		AO353_06515	0.57	-1.4
1,450,859	-		AO353_06515	0.57	+0.8
1,450,859	-		AO353_06515	0.57	+0.6
1,450,859	-		AO353_06515	0.57	+0.6
1,450,859	-		AO353_06515	0.57	-0.1
1,450,859	-		AO353_06515	0.57	-0.4
1,450,859	-		AO353_06515	0.57	+0.3
1,450,859	-		AO353_06515	0.57	-0.4
1,450,859	-		AO353_06515	0.57	-1.6
1,450,859	-		AO353_06515	0.57	-2.2
1,450,863	-		AO353_06515	0.57	+0.5
1,450,863	-		AO353_06515	0.57	+1.2
1,450,902	+		AO353_06515	0.63	-1.1
1,450,902	+		AO353_06515	0.63	+0.5
1,450,903	-		AO353_06515	0.63	-1.0
1,450,903	-		AO353_06515	0.63	-0.4
1,450,980	+		AO353_06515	0.74	+1.1
1,450,981	-		AO353_06515	0.74	+1.2
1,450,981	-		AO353_06515	0.74	-0.0
1,450,981	-		AO353_06515	0.74	-0.6
1,450,981	-		AO353_06515	0.74	+1.5
1,450,981	-		AO353_06515	0.74	-1.1
1,451,089	-		AO353_06515	0.89	+0.1
1,451,089	-		AO353_06515	0.89	-0.0
1,451,162	+				+0.5
1,451,162	+				-0.6
1,451,163	-				+2.2
1,451,163	-				+0.5
1,451,303	+		AO353_06520	0.37	-0.4
1,451,303	+		AO353_06520	0.37	+0.2
1,451,303	+		AO353_06520	0.37	-1.1
1,451,303	+		AO353_06520	0.37	+0.5
1,451,303	+		AO353_06520	0.37	-0.4
1,451,303	+		AO353_06520	0.37	-0.8
1,451,303	+		AO353_06520	0.37	+0.8
1,451,303	+		AO353_06520	0.37	-0.4
1,451,303	+		AO353_06520	0.37	+0.3
1,451,304	-		AO353_06520	0.38	+1.2
1,451,304	-		AO353_06520	0.38	-0.8
1,451,304	-		AO353_06520	0.38	+1.0
1,451,304	-		AO353_06520	0.38	-0.0
1,451,304	-		AO353_06520	0.38	-0.4
1,451,305	+		AO353_06520	0.38	-0.8
1,451,305	+		AO353_06520	0.38	-1.0
1,451,348	+		AO353_06520	0.50	-0.2
1,451,348	+		AO353_06520	0.50	-1.4
1,451,348	+		AO353_06520	0.50	-1.0
1,451,349	-		AO353_06520	0.50	-1.1
1,451,349	-		AO353_06520	0.50	+0.9
1,451,458	+		AO353_06520	0.80	+1.2
1,451,461	+		AO353_06520	0.81	-1.4
1,451,462	-		AO353_06520	0.81	-0.2
1,451,462	-		AO353_06520	0.81	+0.7
1,451,462	-		AO353_06520	0.81	+0.5
1,451,462	-		AO353_06520	0.81	-1.0
1,451,462	-		AO353_06520	0.81	-0.4
1,451,462	-		AO353_06520	0.81	-1.5
1,451,462	-		AO353_06520	0.81	-1.0
1,451,462	-		AO353_06520	0.81	-0.4
1,451,521	+				-0.7
1,451,521	+				-0.8
1,451,521	+				+0.9
1,451,521	+				-2.5
1,451,521	+				-0.4
1,451,522	-				-0.8
1,451,522	-				+0.5
1,451,522	-				+0.1
1,451,522	-				+0.1
1,451,522	-				+0.5
1,451,522	-				+1.6
1,451,522	-				-1.1
1,451,522	-				+0.6
1,451,522	-				-0.9
1,451,574	+				-1.1
1,451,574	+				+0.1
1,451,574	+				+0.9
1,451,574	+				-0.5
1,451,574	+				-1.4
1,451,574	+				-0.8
1,451,574	+				+0.9
1,451,575	-				-1.1
1,451,575	-				-1.0
1,451,575	-				+0.1
1,451,575	-				-1.8
1,451,575	-				-0.2
1,451,575	-				+0.6
1,451,575	-				+1.1
1,451,575	-				+0.2
1,451,576	+				+0.5
1,451,576	+				-1.4
1,451,576	+				-1.1
1,451,576	+				+0.2
1,451,576	+				+1.2
1,451,576	+				+0.2
1,451,576	+				+1.7
1,451,576	+				-0.2
1,451,576	+				+0.5
1,451,576	+				-0.4
1,451,576	+				+0.6
1,451,576	+				-1.2
1,451,576	+				+0.8
1,451,576	+				-2.8
1,451,576	+				+0.5
1,451,576	+				+0.2
1,451,576	+				+0.8
1,451,577	-				+0.8
1,451,577	-				+0.2
1,451,577	-				+2.2
1,451,577	-				+0.5
1,451,577	-				+0.1
1,451,577	-				+0.5
1,451,577	-				-1.1
1,451,577	-				-0.4
1,451,577	-				+0.6
1,451,577	-				-0.8
1,451,577	-				-0.4
1,451,577	-				+0.5
1,451,577	-				-0.4
1,451,577	-				+0.0
1,451,577	-				-1.1
1,451,577	-				-0.2
1,451,577	-				-0.1
1,451,577	-				+0.2
1,451,577	-				+0.4
1,451,592	+				+0.5
1,451,592	+				-2.4
1,451,593	-				+0.2
1,451,615	+				-0.0
1,451,615	+				+0.9
1,451,616	-				+1.0
1,451,616	-				+1.0
1,451,635	+				-0.5
1,451,635	+				+0.2
1,451,635	+				+0.1
1,451,636	-				-1.1
1,451,636	-				-1.0
1,451,652	+				+0.2
1,451,652	+				-0.5
1,451,652	+				-1.4
1,451,652	+				-1.8
1,451,652	+				-0.4
1,451,652	+				-0.8
1,451,652	+				-1.5
1,451,652	+				+0.3
1,451,652	+				-1.0
1,451,653	-				+0.3
1,451,653	-				+0.4
1,451,653	-				+0.6
1,451,653	-				+0.6
1,451,653	-				-1.0
1,451,653	-				-0.4
1,451,653	-				+0.3
1,451,695	+				+1.2
1,451,695	+				-0.0
1,451,696	-				+3.3
1,451,696	-				-0.3
1,451,730	+				-2.1
1,451,730	+				-0.4
1,451,730	+				+0.8
1,451,730	+				+0.4
1,451,730	+				-0.4
1,451,730	+				-0.2
1,451,730	+				+0.8
1,451,731	-				-0.4
1,451,731	-				+0.2
1,451,731	-				-0.0
1,451,731	-				+0.2
1,451,731	-				+0.9
1,451,731	-				-0.1
1,451,731	-				-0.9
1,451,757	+				-2.4
1,451,757	+				-0.6
1,451,757	+				-1.1
1,451,757	+				-0.5
1,451,757	+				+0.3
1,451,758	-				-0.8
1,451,758	-				+0.6
1,451,758	-				-0.3
1,451,758	-				+1.4
1,451,758	-				-0.1
1,451,831	+		AO353_06525	0.23	-1.6
1,451,831	+		AO353_06525	0.23	-0.1
1,451,832	-		AO353_06525	0.24	-0.4
1,451,832	-		AO353_06525	0.24	+1.4
1,451,988	+		AO353_06525	0.58	-0.0
1,451,989	-		AO353_06525	0.58	+1.2
1,451,989	-		AO353_06525	0.58	+0.7
1,451,989	-		AO353_06525	0.58	+2.8
1,452,144	+				+0.2
1,452,144	+				+0.3
1,452,144	+				-1.0
1,452,144	+				-0.2
1,452,144	+				-0.5
1,452,144	+				-0.1
1,452,144	+				+1.0
1,452,144	+				-0.2
1,452,144	+				+0.5
1,452,144	+				-2.0
1,452,145	-				+0.7
1,452,145	-				-0.4
1,452,145	-				-1.4
1,452,145	-				+1.2
1,452,145	-				+0.8
1,452,145	-				+0.8
1,452,145	-				-0.6
1,452,145	-				+0.6
1,452,145	-				+0.5
1,452,145	-				-1.2
1,452,145	-				-1.0
1,452,211	+				+0.9
1,452,212	-				-0.8
1,452,220	-				-0.1
1,452,267	+				-0.9
1,452,267	+				+0.9
1,452,267	+				-0.0
1,452,267	+				+1.2
1,452,267	+				+0.2
1,452,267	+				+0.2
1,452,267	+				+0.6
1,452,268	-				+0.2
1,452,268	-				-1.8
1,452,268	-				+0.4
1,452,276	+				-0.0
1,452,276	+				+0.0
1,452,276	+				+0.0
1,452,277	-				+2.0
1,452,277	-				-0.5
1,452,277	-				-0.7
1,452,309	+				+0.6
1,452,309	+				+0.9
1,452,324	+				-1.8
1,452,324	+				-0.8
1,452,369	+				+0.7
1,452,369	+				+1.4
1,452,369	+				+0.0
1,452,369	+				-1.2
1,452,369	+				+0.2
1,452,369	+				-1.1
1,452,369	+				+0.0
1,452,369	+				+0.6
1,452,370	-				-0.7
1,452,370	-				-0.8
1,452,370	-				-0.5
1,452,370	-				-1.5
1,452,371	+				-0.6
1,452,371	+				+0.2
1,452,371	+				-0.8
1,452,371	+				-0.1
1,452,371	+				-0.8
1,452,371	+				+0.0
1,452,371	+				-1.1
1,452,371	+				+0.6
1,452,371	+				-1.1
1,452,372	-				-0.4
1,452,372	-				-1.8
1,452,372	-				+0.5
1,452,372	-				-0.5
1,452,372	-				-0.2
1,452,372	-				-1.0
1,452,372	-				+0.2
1,452,372	-				+0.1
1,452,372	-				+0.3
1,452,372	-				-1.1
1,452,372	-				-2.2
1,452,372	-				+0.6
1,452,372	-				-0.1
1,452,372	-				+1.5
1,452,372	-				+1.2
1,452,373	+				+1.2
1,452,373	+				+2.0
1,452,373	+				-1.4
1,452,373	+				-0.2
1,452,373	+				+1.8
1,452,373	+				+0.5
1,452,373	+				+0.8
1,452,373	+				+1.2
1,452,373	+				-0.4
1,452,374	-				-0.3
1,452,374	-				-1.4
1,452,374	-				-0.4
1,452,374	-				+0.2
1,452,374	-				+1.6
1,452,374	-				+1.5
1,452,374	-				-1.5
1,452,374	-				+1.2
1,452,374	-				+0.2
1,452,374	-				-0.4
1,452,374	-				+0.6
1,452,374	-				+0.3
1,452,374	-				-0.9
1,452,374	-				-0.2
1,452,374	-				-1.1
1,452,384	+				-0.4
1,452,384	+				-0.7
1,452,384	+				-1.1
1,452,384	+				+0.6
1,452,384	+				+0.6
1,452,384	+				+1.0
1,452,384	+				-1.6
1,452,384	+				+2.5
1,452,384	+				-2.2
1,452,384	+				+2.0
1,452,384	+				-1.2
1,452,384	+				-0.0
1,452,384	+				-0.5
1,452,384	+				+1.0
1,452,384	+				-1.8
1,452,384	+				-2.2
1,452,384	+				-0.0
1,452,385	-				+0.5
1,452,385	-				+0.7
1,452,385	-				+1.4
1,452,385	-				+1.2
1,452,385	-				+0.6
1,452,385	-				-1.8
1,452,385	-				-1.2
1,452,385	-				-1.3
1,452,385	-				-0.4
1,452,385	-				+1.8
1,452,395	+				-0.2
1,452,395	+				-0.1
1,452,396	-				+0.2
1,452,396	-				+1.1
1,452,407	+				-1.0
1,452,407	+				+0.6
1,452,407	+				-0.6
1,452,407	+				-1.4
1,452,597	+				-1.2
1,452,732	+		AO353_06530	0.18	+0.2
1,452,732	+		AO353_06530	0.18	-1.5
1,452,732	+		AO353_06530	0.18	-0.1
1,452,732	+		AO353_06530	0.18	+1.0
1,452,732	+		AO353_06530	0.18	-0.7
1,452,733	-		AO353_06530	0.18	-1.4
1,452,733	-		AO353_06530	0.18	+0.5
1,452,733	-		AO353_06530	0.18	-1.6
1,452,798	+		AO353_06530	0.22	-0.4
1,452,798	+		AO353_06530	0.22	-0.0
1,452,799	-		AO353_06530	0.22	+0.0
1,452,825	+		AO353_06530	0.23	-0.6
1,452,825	+		AO353_06530	0.23	-0.2
1,452,825	+		AO353_06530	0.23	-0.4
1,452,825	+		AO353_06530	0.23	+0.2
1,452,826	-		AO353_06530	0.23	-0.1
1,452,826	-		AO353_06530	0.23	+3.2
1,452,826	-		AO353_06530	0.23	-0.1
1,452,826	-		AO353_06530	0.23	-1.0
1,452,867	+		AO353_06530	0.26	-0.5
1,452,867	+		AO353_06530	0.26	-1.0
1,452,944	+		AO353_06530	0.30	-3.2
1,452,944	+		AO353_06530	0.30	+0.9
1,452,944	+		AO353_06530	0.30	-1.4
1,453,002	-		AO353_06530	0.34	-1.1
1,453,005	+		AO353_06530	0.34	-1.0
1,453,005	+		AO353_06530	0.34	-1.8
1,453,005	+		AO353_06530	0.34	+0.4
1,453,005	+		AO353_06530	0.34	-0.8
1,453,005	+		AO353_06530	0.34	+0.1
1,453,005	+		AO353_06530	0.34	+0.6
1,453,005	+		AO353_06530	0.34	-0.1
1,453,005	+		AO353_06530	0.34	+0.8
1,453,005	+		AO353_06530	0.34	+0.1
1,453,005	+		AO353_06530	0.34	-0.8
1,453,005	+		AO353_06530	0.34	+0.4
1,453,005	+		AO353_06530	0.34	-1.6
1,453,005	+		AO353_06530	0.34	-0.7
1,453,006	-		AO353_06530	0.34	-0.8
1,453,006	-		AO353_06530	0.34	+1.2
1,453,006	-		AO353_06530	0.34	+0.6
1,453,006	-		AO353_06530	0.34	-0.2
1,453,006	-		AO353_06530	0.34	+0.2
1,453,006	-		AO353_06530	0.34	-0.6
1,453,006	-		AO353_06530	0.34	-1.4
1,453,006	-		AO353_06530	0.34	-1.5
1,453,006	-		AO353_06530	0.34	+1.5
1,453,006	-		AO353_06530	0.34	+0.5
1,453,006	-		AO353_06530	0.34	-0.5
1,453,006	-		AO353_06530	0.34	-2.1
1,453,006	-		AO353_06530	0.34	-1.6
1,453,006	-		AO353_06530	0.34	-0.2
1,453,006	-		AO353_06530	0.34	-1.1
1,453,006	-		AO353_06530	0.34	-0.4
1,453,051	-		AO353_06530	0.36	-0.8
1,453,143	+		AO353_06530	0.42	-0.2
1,453,143	+		AO353_06530	0.42	-1.1
1,453,143	+		AO353_06530	0.42	-2.5
1,453,143	+		AO353_06530	0.42	-2.0
1,453,144	-		AO353_06530	0.42	+0.9