Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2549

Experiment: D-Cycloserine 0.015625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.015625 mg/ml
2,627,120	-		Synpcc7942_2547	0.36	-1.0
2,627,136	+		Synpcc7942_2547	0.41	-0.0
2,627,286	-		Synpcc7942_2547	0.88	+0.3
2,627,287	-		Synpcc7942_2547	0.88	-0.4
2,627,287	-		Synpcc7942_2547	0.88	-0.0
2,627,309	-				-0.1
2,627,328	-				-1.4
2,627,343	-				-0.5
2,627,394	+				+0.3
2,627,397	-				-0.0
2,627,397	-				-0.0
2,627,417	+				-0.4
2,628,051	+				-0.0
2,628,051	+				-0.0
2,628,051	+				+2.3
2,628,051	+				+0.1
2,628,059	-				+1.1
2,628,059	-				-0.3
2,628,059	-				+1.3
2,628,059	-				+0.8
2,628,059	-				-0.9
2,628,059	-				+0.6
2,628,085	+				+0.4
2,628,090	+				-1.6
2,628,102	+				+2.0
2,628,108	+				+0.2
2,628,187	-		Synpcc7942_2549	0.33	-0.5
2,628,209	-		Synpcc7942_2549	0.41	+1.5
2,628,212	+		Synpcc7942_2549	0.42	+3.0
2,628,222	+		Synpcc7942_2549	0.46	+0.5
2,628,234	+		Synpcc7942_2549	0.51	+0.2
2,628,267	+		Synpcc7942_2549	0.64	+2.1
2,628,284	+		Synpcc7942_2549	0.71	+1.0
2,628,343	+				-0.4
2,628,343	+				-0.4
2,628,343	+				+0.6
2,628,343	+				+1.0
2,628,343	+				+0.3
2,628,343	+				+0.7
2,628,351	-				-0.0
2,628,351	-				-0.4
2,628,351	-				-0.0
2,628,351	-				+0.4
2,628,351	-				+0.5
2,628,373	+				+0.5
2,628,373	+				-0.0
2,628,391	-				-0.0
2,628,397	+				-2.4
2,628,397	+				-1.0
2,628,405	-				+1.0
2,628,416	+				-2.0
2,628,429	-				-1.6
2,628,433	+				-0.5
2,628,433	+				+1.1
2,628,441	-				+0.7
2,628,441	-				-1.0
2,628,441	-				+0.3
2,628,483	+				-1.0
2,628,500	+				+0.4
2,628,520	+				+0.5
2,628,556	+				+2.3
2,628,564	-				+0.1
2,628,564	-				+1.4
2,628,564	-				+1.5
2,628,566	+				+0.6
2,628,566	+				+1.3
2,628,574	-				+0.3
2,628,574	-				-0.6
2,628,574	-				+0.2
2,628,576	+				+1.0
2,628,617	+		Synpcc7942_2550	0.12	+0.4
2,628,621	-		Synpcc7942_2550	0.12	-0.2
2,628,622	+		Synpcc7942_2550	0.13	+0.5
2,628,622	-		Synpcc7942_2550	0.13	+0.4
2,628,627	+		Synpcc7942_2550	0.13	-0.5
2,628,641	+		Synpcc7942_2550	0.14	+0.3
2,628,641	+		Synpcc7942_2550	0.14	+1.1
2,628,641	-		Synpcc7942_2550	0.14	+1.4
2,628,649	-		Synpcc7942_2550	0.15	-0.1
2,628,716	+		Synpcc7942_2550	0.21	+1.5
2,628,724	-		Synpcc7942_2550	0.22	+1.5
2,628,726	+		Synpcc7942_2550	0.22	-0.4
2,628,771	+		Synpcc7942_2550	0.26	-0.0
2,628,799	+		Synpcc7942_2550	0.29	+0.7
2,628,805	-		Synpcc7942_2550	0.30	+1.4
2,628,805	-		Synpcc7942_2550	0.30	-0.9
2,628,871	+		Synpcc7942_2550	0.36	-0.0
2,628,888	+		Synpcc7942_2550	0.37	+2.0
2,628,910	-		Synpcc7942_2550	0.39	-0.4
2,628,922	-		Synpcc7942_2550	0.41	-1.0
2,628,943	-		Synpcc7942_2550	0.42	-1.0
2,628,946	+		Synpcc7942_2550	0.43	-0.5
2,628,946	+		Synpcc7942_2550	0.43	-1.2
2,628,953	-				+1.0
2,628,954	-		Synpcc7942_2550	0.43	+0.5
2,628,956	-		Synpcc7942_2550	0.44	+1.1
2,628,969	+		Synpcc7942_2550	0.45	+0.4
2,628,982	+		Synpcc7942_2550	0.46	+0.1
2,628,988	-		Synpcc7942_2550	0.47	+1.5
2,629,014	+		Synpcc7942_2550	0.49	-0.4
2,629,056	-		Synpcc7942_2550	0.53	-1.9
2,629,061	+		Synpcc7942_2550	0.53	-0.0
2,629,069	-		Synpcc7942_2550	0.54	-0.9
2,629,069	-		Synpcc7942_2550	0.54	-0.9
2,629,084	+		Synpcc7942_2550	0.56	+0.5
2,629,151	+		Synpcc7942_2550	0.62	+0.4
2,629,151	+		Synpcc7942_2550	0.62	+1.5
2,629,152	+				-0.0
2,629,159	-		Synpcc7942_2550	0.63	-0.2
2,629,159	-		Synpcc7942_2550	0.63	-0.9
2,629,159	-		Synpcc7942_2550	0.63	+0.4
2,629,160	-		Synpcc7942_2550	0.63	-3.5
2,629,184	-		Synpcc7942_2550	0.65	-1.3
2,629,189	+		Synpcc7942_2550	0.65	+0.6
2,629,189	+		Synpcc7942_2550	0.65	-0.3
2,629,189	+		Synpcc7942_2550	0.65	+0.3
2,629,189	+		Synpcc7942_2550	0.65	-0.4
2,629,189	+		Synpcc7942_2550	0.65	-0.5
2,629,189	+		Synpcc7942_2550	0.65	-0.2
2,629,197	-		Synpcc7942_2550	0.66	-2.0
2,629,197	-		Synpcc7942_2550	0.66	-0.9
2,629,197	-		Synpcc7942_2550	0.66	-0.0
2,629,197	-		Synpcc7942_2550	0.66	-1.0
2,629,197	-		Synpcc7942_2550	0.66	-1.5
2,629,217	-		Synpcc7942_2550	0.68	-0.6
2,629,225	-		Synpcc7942_2550	0.69	+0.8
2,629,245	+		Synpcc7942_2550	0.71	+0.7
2,629,253	-		Synpcc7942_2550	0.71	+2.8