Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2484

Experiment: D-Cycloserine 0.015625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.015625 mg/ml
2,564,327	+		Synpcc7942_2483	0.44	-0.5
2,564,358	+		Synpcc7942_2483	0.46	-0.2
2,564,391	+		Synpcc7942_2483	0.48	-0.0
2,564,391	+		Synpcc7942_2483	0.48	-0.7
2,564,393	+		Synpcc7942_2483	0.48	+0.6
2,564,396	+		Synpcc7942_2483	0.48	+0.2
2,564,396	+		Synpcc7942_2483	0.48	+0.3
2,564,399	-		Synpcc7942_2483	0.48	+0.6
2,564,406	+		Synpcc7942_2483	0.49	-0.0
2,564,409	-		Synpcc7942_2483	0.49	+0.4
2,564,413	-		Synpcc7942_2483	0.49	-1.6
2,564,414	-		Synpcc7942_2483	0.49	-1.6
2,564,414	-		Synpcc7942_2483	0.49	-1.0
2,564,454	+		Synpcc7942_2483	0.52	-1.0
2,564,454	+		Synpcc7942_2483	0.52	+1.1
2,564,454	+		Synpcc7942_2483	0.52	+1.1
2,564,459	+		Synpcc7942_2483	0.52	+1.9
2,564,462	-		Synpcc7942_2483	0.53	-0.2
2,564,462	-		Synpcc7942_2483	0.53	+2.0
2,564,462	-		Synpcc7942_2483	0.53	-0.6
2,564,480	+		Synpcc7942_2483	0.54	+0.4
2,564,485	-		Synpcc7942_2483	0.54	-0.6
2,564,503	-		Synpcc7942_2483	0.55	+1.0
2,564,770	-		Synpcc7942_2483	0.73	+1.5
2,564,785	-		Synpcc7942_2483	0.74	-0.0
2,564,792	-		Synpcc7942_2483	0.75	+1.4
2,564,798	+		Synpcc7942_2483	0.75	-1.0
2,564,798	+		Synpcc7942_2483	0.75	+2.0
2,564,798	+		Synpcc7942_2483	0.75	+0.1
2,564,806	-		Synpcc7942_2483	0.76	+0.3
2,564,806	-		Synpcc7942_2483	0.76	-0.0
2,564,806	-		Synpcc7942_2483	0.76	-0.4
2,564,808	+		Synpcc7942_2483	0.76	+1.3
2,564,866	-		Synpcc7942_2483	0.80	+1.0
2,564,912	-		Synpcc7942_2483	0.83	+0.7
2,564,929	+		Synpcc7942_2483	0.84	+1.4
2,565,003	-		Synpcc7942_2483	0.89	-0.8
2,565,103	-				-0.8
2,565,110	+				-1.0
2,565,117	-				+0.7
2,565,124	-				-0.3
2,565,135	+				+1.0
2,565,154	+				-0.0
2,565,167	-				-1.0
2,565,180	-				-0.3
2,565,203	-				+0.5
2,565,203	-				+1.5
2,565,203	-				+2.3
2,565,232	+				-0.0
2,565,356	-				-1.9
2,565,367	+		Synpcc7942_2484	0.10	-2.3
2,565,448	+		Synpcc7942_2484	0.22	-1.6
2,565,448	-		Synpcc7942_2484	0.22	-1.9
2,565,448	-		Synpcc7942_2484	0.22	-2.5
2,565,448	-		Synpcc7942_2484	0.22	-0.4
2,565,456	-		Synpcc7942_2484	0.23	-2.7
2,565,456	-		Synpcc7942_2484	0.23	-1.4
2,565,458	+		Synpcc7942_2484	0.23	-2.0
2,565,459	+		Synpcc7942_2484	0.23	-1.1
2,565,461	+		Synpcc7942_2484	0.24	-3.1
2,565,472	+		Synpcc7942_2484	0.25	-2.6
2,565,474	+		Synpcc7942_2484	0.26	-2.0
2,565,484	+		Synpcc7942_2484	0.27	-1.9
2,565,515	-		Synpcc7942_2484	0.31	-0.5
2,565,520	+		Synpcc7942_2484	0.32	-2.9
2,565,520	-		Synpcc7942_2484	0.32	-2.7
2,565,520	-		Synpcc7942_2484	0.32	-1.0
2,565,522	+		Synpcc7942_2484	0.32	-2.0
2,565,522	+		Synpcc7942_2484	0.32	-0.9
2,565,530	-		Synpcc7942_2484	0.34	-0.9
2,565,530	-		Synpcc7942_2484	0.34	-1.0
2,565,530	-		Synpcc7942_2484	0.34	-2.6
2,565,564	+		Synpcc7942_2484	0.39	-3.6
2,565,580	-		Synpcc7942_2484	0.41	-3.0
2,565,603	+		Synpcc7942_2484	0.44	-0.9
2,565,611	-		Synpcc7942_2484	0.45	-3.1
2,565,631	+		Synpcc7942_2484	0.48	-2.2
2,565,633	+		Synpcc7942_2484	0.48	-1.4
2,565,695	+		Synpcc7942_2484	0.57	-1.6
2,565,695	-		Synpcc7942_2484	0.57	-1.0
2,565,703	-		Synpcc7942_2484	0.59	-2.4
2,565,733	+		Synpcc7942_2484	0.63	-0.9
2,565,733	-		Synpcc7942_2484	0.63	-2.4
2,565,735	+		Synpcc7942_2484	0.63	-1.0
2,565,738	+		Synpcc7942_2484	0.64	-1.4
2,565,743	-		Synpcc7942_2484	0.64	-1.6
2,565,806	-		Synpcc7942_2484	0.73	-3.0
2,565,806	-		Synpcc7942_2484	0.73	-2.0
2,565,810	+		Synpcc7942_2484	0.74	-0.7
2,565,831	-		Synpcc7942_2484	0.77	-1.0
2,565,844	+		Synpcc7942_2484	0.79	-2.9
2,565,852	-		Synpcc7942_2484	0.80	-2.0
2,565,865	+		Synpcc7942_2484	0.82	-3.2
2,565,901	-		Synpcc7942_2484	0.87	-0.6
2,565,953	+				+0.3
2,565,961	-				-2.1
2,565,995	-				-0.5
2,566,223	-		Synpcc7942_2485	0.15	-2.6
2,566,236	-		Synpcc7942_2485	0.17	-1.9
2,566,258	+		Synpcc7942_2485	0.21	-3.6
2,566,266	+		Synpcc7942_2485	0.22	-2.3
2,566,274	-		Synpcc7942_2485	0.23	-3.4
2,566,313	+		Synpcc7942_2485	0.30	-2.9
2,566,313	+		Synpcc7942_2485	0.30	-2.9
2,566,368	-		Synpcc7942_2485	0.39	-0.6
2,566,394	+		Synpcc7942_2485	0.44	-1.6
2,566,430	+		Synpcc7942_2485	0.50	-1.8
2,566,431	+		Synpcc7942_2485	0.50	-0.6
2,566,445	+		Synpcc7942_2485	0.52	-1.6
2,566,454	+		Synpcc7942_2485	0.54	-2.4
2,566,477	+		Synpcc7942_2485	0.58	-1.8
2,566,537	-		Synpcc7942_2485	0.68	-2.0
2,566,575	+		Synpcc7942_2485	0.74	-1.0
2,566,637	+		Synpcc7942_2485	0.85	-2.4
2,566,661	-		Synpcc7942_2485	0.89	-0.0
2,566,664	+		Synpcc7942_2485	0.89	-3.4
2,566,687	+				+0.4
2,566,687	+				-2.6
2,566,695	-				-3.2
2,566,781	+				-1.0
2,566,886	+		Synpcc7942_2486	0.10	-2.6
2,566,892	-		Synpcc7942_2486	0.11	-2.1
2,566,894	+		Synpcc7942_2486	0.11	-1.7
2,566,894	-		Synpcc7942_2486	0.11	-0.0
2,566,937	-		Synpcc7942_2486	0.13	-1.6
2,566,937	-		Synpcc7942_2486	0.13	-1.5
2,566,963	-		Synpcc7942_2486	0.15	-2.0
2,566,963	-		Synpcc7942_2486	0.15	-1.8
2,566,973	-		Synpcc7942_2486	0.16	-2.0
2,566,973	-		Synpcc7942_2486	0.16	-2.1
2,566,973	-		Synpcc7942_2486	0.16	-2.4