Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2451

Experiment: D-Cycloserine 0.015625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.015625 mg/ml
2,528,382	+	pilQ	Synpcc7942_2450	0.61	-2.0
2,528,382	+	pilQ	Synpcc7942_2450	0.61	-1.4
2,528,405	+	pilQ	Synpcc7942_2450	0.62	-2.2
2,528,405	+	pilQ	Synpcc7942_2450	0.62	-0.5
2,528,413	-	pilQ	Synpcc7942_2450	0.62	-1.9
2,528,413	-	pilQ	Synpcc7942_2450	0.62	-0.9
2,528,426	+	pilQ	Synpcc7942_2450	0.63	-2.4
2,528,426	+	pilQ	Synpcc7942_2450	0.63	-4.7
2,528,434	-	pilQ	Synpcc7942_2450	0.63	-0.5
2,528,454	+	pilQ	Synpcc7942_2450	0.64	-1.3
2,528,461	+	pilQ	Synpcc7942_2450	0.64	-1.9
2,528,469	-	pilQ	Synpcc7942_2450	0.64	-3.0
2,528,486	+	pilQ	Synpcc7942_2450	0.65	-2.0
2,528,488	+	pilQ	Synpcc7942_2450	0.65	-2.4
2,528,515	+	pilQ	Synpcc7942_2450	0.66	-0.6
2,528,523	-	pilQ	Synpcc7942_2450	0.67	-2.2
2,528,548	+	pilQ	Synpcc7942_2450	0.68	-2.7
2,528,554	+	pilQ	Synpcc7942_2450	0.68	-2.4
2,528,566	+	pilQ	Synpcc7942_2450	0.69	-2.9
2,528,574	-	pilQ	Synpcc7942_2450	0.69	-2.9
2,528,579	+	pilQ	Synpcc7942_2450	0.69	-1.0
2,528,579	+	pilQ	Synpcc7942_2450	0.69	-1.9
2,528,579	+	pilQ	Synpcc7942_2450	0.69	-1.6
2,528,579	+	pilQ	Synpcc7942_2450	0.69	-2.9
2,528,587	-	pilQ	Synpcc7942_2450	0.70	-3.5
2,528,587	-	pilQ	Synpcc7942_2450	0.70	-1.3
2,528,587	-	pilQ	Synpcc7942_2450	0.70	-1.8
2,528,587	-	pilQ	Synpcc7942_2450	0.70	-1.6
2,528,587	-	pilQ	Synpcc7942_2450	0.70	-3.0
2,528,587	-	pilQ	Synpcc7942_2450	0.70	-2.9
2,528,587	-	pilQ	Synpcc7942_2450	0.70	-2.8
2,528,600	+	pilQ	Synpcc7942_2450	0.70	-2.9
2,528,600	+	pilQ	Synpcc7942_2450	0.70	-1.0
2,528,600	+	pilQ	Synpcc7942_2450	0.70	-2.4
2,528,608	-	pilQ	Synpcc7942_2450	0.70	-3.4
2,528,608	-	pilQ	Synpcc7942_2450	0.70	-0.0
2,528,624	+	pilQ	Synpcc7942_2450	0.71	-1.9
2,528,633	+	pilQ	Synpcc7942_2450	0.72	-3.2
2,528,657	-	pilQ	Synpcc7942_2450	0.73	-3.1
2,528,676	-	pilQ	Synpcc7942_2450	0.73	-2.9
2,528,686	-				-0.0
2,528,693	-	pilQ	Synpcc7942_2450	0.74	-2.4
2,528,693	-	pilQ	Synpcc7942_2450	0.74	-1.2
2,528,693	-	pilQ	Synpcc7942_2450	0.74	-3.0
2,528,694	-	pilQ	Synpcc7942_2450	0.74	-1.6
2,528,712	+	pilQ	Synpcc7942_2450	0.75	-0.9
2,528,712	+	pilQ	Synpcc7942_2450	0.75	-2.0
2,528,720	-	pilQ	Synpcc7942_2450	0.75	-1.3
2,528,720	-	pilQ	Synpcc7942_2450	0.75	-3.0
2,528,741	+	pilQ	Synpcc7942_2450	0.76	-1.6
2,528,746	+	pilQ	Synpcc7942_2450	0.76	-2.8
2,528,751	+	pilQ	Synpcc7942_2450	0.77	-2.9
2,528,753	+	pilQ	Synpcc7942_2450	0.77	-2.9
2,528,754	-	pilQ	Synpcc7942_2450	0.77	-2.5
2,528,790	+	pilQ	Synpcc7942_2450	0.78	-1.0
2,528,798	-	pilQ	Synpcc7942_2450	0.79	+0.6
2,528,803	-	pilQ	Synpcc7942_2450	0.79	-2.2
2,528,807	+	pilQ	Synpcc7942_2450	0.79	-0.8
2,528,807	+	pilQ	Synpcc7942_2450	0.79	-3.3
2,528,815	-	pilQ	Synpcc7942_2450	0.79	-4.5
2,528,825	-	pilQ	Synpcc7942_2450	0.80	-2.0
2,528,829	+	pilQ	Synpcc7942_2450	0.80	-3.4
2,528,882	+	pilQ	Synpcc7942_2450	0.82	-0.8
2,528,894	-	pilQ	Synpcc7942_2450	0.83	-1.7
2,528,903	-	pilQ	Synpcc7942_2450	0.83	-1.9
2,528,929	+	pilQ	Synpcc7942_2450	0.84	-2.7
2,529,011	-	pilQ	Synpcc7942_2450	0.88	-2.4
2,529,013	+	pilQ	Synpcc7942_2450	0.88	-1.6
2,529,013	+	pilQ	Synpcc7942_2450	0.88	-0.6
2,529,014	+	pilQ	Synpcc7942_2450	0.88	-0.0
2,529,014	+	pilQ	Synpcc7942_2450	0.88	-1.0
2,529,014	+	pilQ	Synpcc7942_2450	0.88	-2.3
2,529,014	-	pilQ	Synpcc7942_2450	0.88	-2.9
2,529,021	-	pilQ	Synpcc7942_2450	0.88	-1.4
2,529,022	-	pilQ	Synpcc7942_2450	0.88	-1.9
2,529,028	-	pilQ	Synpcc7942_2450	0.89	-3.7
2,529,036	+	pilQ	Synpcc7942_2450	0.89	-1.6
2,529,049	-	pilQ	Synpcc7942_2450	0.90	-2.0
2,529,054	-	pilQ	Synpcc7942_2450	0.90	-1.2
2,529,054	-	pilQ	Synpcc7942_2450	0.90	-2.0
2,529,059	+	pilQ	Synpcc7942_2450	0.90	-1.3
2,529,059	+	pilQ	Synpcc7942_2450	0.90	-1.6
2,529,067	-				-2.0
2,529,104	+				-2.2
2,529,124	-				-1.8
2,529,126	+				-2.9
2,529,134	-				-2.9
2,529,134	-				-1.0
2,529,134	-				-2.8
2,529,196	+				-1.9
2,529,213	-				-1.6
2,529,219	-				+0.5
2,529,219	-				-2.2
2,529,229	-				-3.2
2,529,256	+				-0.7
2,529,258	+				-1.6
2,529,291	-				-1.0
2,529,293	+				+1.3
2,529,293	+				+0.8
2,529,302	+				-0.3
2,529,347	-				-0.0
2,529,347	-				+0.4
2,529,364	+				-0.6
2,529,369	+				+0.8
2,529,372	-				+1.0
2,529,377	-				-0.4
2,529,383	+				+0.0
2,529,391	-				-0.6
2,529,403	+				-0.0
2,529,411	-				-0.5
2,529,456	+	pilO	Synpcc7942_2451	0.11	+1.7
2,529,505	+	pilO	Synpcc7942_2451	0.17	-2.0
2,529,505	+	pilO	Synpcc7942_2451	0.17	-2.2
2,529,505	+	pilO	Synpcc7942_2451	0.17	-2.9
2,529,505	+	pilO	Synpcc7942_2451	0.17	-1.9
2,529,505	+	pilO	Synpcc7942_2451	0.17	-1.2
2,529,507	+	pilO	Synpcc7942_2451	0.17	-1.9
2,529,513	-	pilO	Synpcc7942_2451	0.18	-2.0
2,529,525	-	pilO	Synpcc7942_2451	0.20	-3.1
2,529,532	-	pilO	Synpcc7942_2451	0.21	-1.7
2,529,564	+	pilO	Synpcc7942_2451	0.25	-1.4
2,529,581	+	pilO	Synpcc7942_2451	0.27	-2.4
2,529,627	+	pilO	Synpcc7942_2451	0.32	-2.4
2,529,627	-	pilO	Synpcc7942_2451	0.32	-3.7
2,529,627	-	pilO	Synpcc7942_2451	0.32	-3.4
2,529,627	-	pilO	Synpcc7942_2451	0.32	-1.8
2,529,635	-	pilO	Synpcc7942_2451	0.33	-2.6
2,529,639	+	pilO	Synpcc7942_2451	0.34	-2.3
2,529,653	-	pilO	Synpcc7942_2451	0.36	-2.1
2,529,661	-	pilO	Synpcc7942_2451	0.37	-2.4
2,529,667	-	pilO	Synpcc7942_2451	0.37	-2.3
2,529,731	+	pilO	Synpcc7942_2451	0.46	-3.4
2,529,763	+	pilO	Synpcc7942_2451	0.50	-1.0
2,529,763	-	pilO	Synpcc7942_2451	0.50	-1.3
2,529,827	+	pilO	Synpcc7942_2451	0.58	-1.4
2,529,828	+	pilO	Synpcc7942_2451	0.58	-1.9
2,529,853	-	pilO	Synpcc7942_2451	0.61	-1.9
2,529,863	-	pilO	Synpcc7942_2451	0.62	-0.0
2,529,863	-	pilO	Synpcc7942_2451	0.62	-2.3
2,529,863	-	pilO	Synpcc7942_2451	0.62	-4.0
2,529,863	-	pilO	Synpcc7942_2451	0.62	-0.0
2,529,876	+	pilO	Synpcc7942_2451	0.64	-0.6
2,529,888	+	pilO	Synpcc7942_2451	0.65	-1.3
2,529,896	-				-2.4
2,529,900	-	pilO	Synpcc7942_2451	0.67	-3.1
2,529,910	-	pilO	Synpcc7942_2451	0.68	-1.9
2,529,923	+	pilO	Synpcc7942_2451	0.70	-1.8
2,529,923	+	pilO	Synpcc7942_2451	0.70	-1.6
2,529,923	+	pilO	Synpcc7942_2451	0.70	-3.4
2,529,923	+	pilO	Synpcc7942_2451	0.70	-2.7
2,529,923	+	pilO	Synpcc7942_2451	0.70	-1.4
2,529,923	+	pilO	Synpcc7942_2451	0.70	-3.7
2,529,931	-	pilO	Synpcc7942_2451	0.71	-2.9
2,529,931	-	pilO	Synpcc7942_2451	0.71	-2.3
2,529,946	-	pilO	Synpcc7942_2451	0.73	-1.6
2,529,957	+	pilO	Synpcc7942_2451	0.74	-1.5
2,529,965	-	pilO	Synpcc7942_2451	0.75	-2.8
2,529,965	-	pilO	Synpcc7942_2451	0.75	-3.8
2,529,965	-	pilO	Synpcc7942_2451	0.75	-1.5
2,529,965	-	pilO	Synpcc7942_2451	0.75	-2.4
2,529,989	+	pilO	Synpcc7942_2451	0.78	-0.9
2,529,989	+	pilO	Synpcc7942_2451	0.78	-2.2
2,529,989	+	pilO	Synpcc7942_2451	0.78	-2.6
2,530,004	+	pilO	Synpcc7942_2451	0.80	-1.2
2,530,040	+	pilO	Synpcc7942_2451	0.84	-2.7
2,530,043	-	pilO	Synpcc7942_2451	0.85	-2.4
2,530,059	+	pilO	Synpcc7942_2451	0.87	-0.5
2,530,084	-				-0.0
2,530,084	-				-1.4
2,530,084	-				-1.6
2,530,086	-				-0.8
2,530,158	+				-0.8
2,530,159	+				-0.0
2,530,159	+				-1.2
2,530,159	+				+0.2
2,530,159	+				-0.5
2,530,166	+				-0.0
2,530,167	-				-1.4
2,530,167	-				-1.0
2,530,191	+				-1.6
2,530,263	+		Synpcc7942_2452	0.14	+1.0
2,530,263	+		Synpcc7942_2452	0.14	-0.0
2,530,303	+		Synpcc7942_2452	0.20	-1.9
2,530,303	+		Synpcc7942_2452	0.20	-1.8
2,530,303	+		Synpcc7942_2452	0.20	-1.6
2,530,303	+		Synpcc7942_2452	0.20	-1.6
2,530,303	+		Synpcc7942_2452	0.20	-0.0
2,530,303	+		Synpcc7942_2452	0.20	-3.0
2,530,311	-		Synpcc7942_2452	0.21	-2.5
2,530,311	-		Synpcc7942_2452	0.21	-1.8
2,530,311	-		Synpcc7942_2452	0.21	-1.6
2,530,311	-		Synpcc7942_2452	0.21	-2.0
2,530,311	-		Synpcc7942_2452	0.21	-2.6
2,530,311	-		Synpcc7942_2452	0.21	-2.6
2,530,313	+		Synpcc7942_2452	0.21	-2.4
2,530,313	+		Synpcc7942_2452	0.21	-3.5
2,530,313	+		Synpcc7942_2452	0.21	-0.4
2,530,333	-		Synpcc7942_2452	0.24	-2.3
2,530,335	+		Synpcc7942_2452	0.24	-2.2
2,530,336	+		Synpcc7942_2452	0.25	-3.0
2,530,343	-		Synpcc7942_2452	0.26	-1.6
2,530,344	-		Synpcc7942_2452	0.26	-2.6
2,530,369	+		Synpcc7942_2452	0.29	-2.4
2,530,396	+		Synpcc7942_2452	0.33	-3.2
2,530,411	-		Synpcc7942_2452	0.35	-3.0
2,530,435	+		Synpcc7942_2452	0.38	-1.0
2,530,445	+		Synpcc7942_2452	0.40	-1.8
2,530,447	+		Synpcc7942_2452	0.40	-3.5
2,530,453	-		Synpcc7942_2452	0.41	-3.0
2,530,467	-		Synpcc7942_2452	0.43	-1.3
2,530,474	+		Synpcc7942_2452	0.44	-4.0
2,530,514	+		Synpcc7942_2452	0.49	-3.9
2,530,522	-		Synpcc7942_2452	0.50	-1.8
2,530,523	+		Synpcc7942_2452	0.51	-2.3
2,530,528	+		Synpcc7942_2452	0.51	-2.6
2,530,528	+		Synpcc7942_2452	0.51	-3.5
2,530,528	+		Synpcc7942_2452	0.51	-2.6
2,530,536	-		Synpcc7942_2452	0.52	-2.3
2,530,542	+		Synpcc7942_2452	0.53	-2.0
2,530,542	+		Synpcc7942_2452	0.53	-2.9
2,530,542	+		Synpcc7942_2452	0.53	-3.8
2,530,542	+		Synpcc7942_2452	0.53	-2.4
2,530,549	-		Synpcc7942_2452	0.54	-2.7
2,530,550	-		Synpcc7942_2452	0.54	-2.0
2,530,572	-		Synpcc7942_2452	0.57	-2.0
2,530,584	+		Synpcc7942_2452	0.59	-3.1
2,530,584	+		Synpcc7942_2452	0.59	-2.2
2,530,584	+		Synpcc7942_2452	0.59	-1.9
2,530,592	-		Synpcc7942_2452	0.60	-0.0
2,530,607	-		Synpcc7942_2452	0.62	-3.8
2,530,607	-		Synpcc7942_2452	0.62	-3.3
2,530,622	-		Synpcc7942_2452	0.64	-2.2
2,530,643	-		Synpcc7942_2452	0.67	-1.6
2,530,678	-		Synpcc7942_2452	0.72	-0.4
2,530,687	-		Synpcc7942_2452	0.74	-1.6
2,530,711	+		Synpcc7942_2452	0.77	-2.3
2,530,717	-		Synpcc7942_2452	0.78	-2.0
2,530,739	+		Synpcc7942_2452	0.81	-2.5
2,530,756	+		Synpcc7942_2452	0.83	-2.5
2,530,756	+		Synpcc7942_2452	0.83	-1.4
2,530,764	-		Synpcc7942_2452	0.84	-1.4
2,530,771	+		Synpcc7942_2452	0.85	-2.3
2,530,798	+		Synpcc7942_2452	0.89	-1.6
2,530,806	+				-4.9
2,530,808	+				-3.0
2,530,814	-				-3.4
2,530,822	-				-2.6
2,530,861	+				-2.4
2,530,861	+				-1.9
2,530,862	+				-2.6
2,530,868	+				-1.4
2,530,868	+				-2.4
2,530,871	+				-0.9
2,530,876	+				+1.5
2,530,876	+				-0.5
2,530,876	-				+0.8
2,530,876	-				-1.4
2,530,878	+				-1.3
2,530,879	-				-0.8
2,530,879	-				-0.0
2,530,884	-				+0.0
2,530,884	-				-0.1
2,530,884	-				-0.0
2,530,884	-				+1.0
2,530,884	-				-0.0
2,530,884	-				+1.5
2,530,886	-				+0.0
2,530,886	-				+1.0
2,530,886	-				+1.4
2,530,886	-				+0.4
2,530,886	-				+1.4
2,530,886	-				+1.0
2,530,886	-				-0.8
2,530,886	-				-0.8
2,530,900	+				-1.9
2,530,900	+				-0.6
2,530,900	+				-2.9
2,530,900	+				-1.6
2,530,900	+				-2.4
2,530,900	+				-3.0
2,530,900	+				-1.9
2,530,900	+				-1.0
2,530,900	+				-1.6
2,530,900	+				-2.0
2,530,900	+				-3.0
2,530,901	-				-3.0
2,530,908	-				-1.0
2,530,908	-				-2.6
2,530,908	-				-2.6
2,530,908	-				-0.6
2,530,908	-				-0.9
2,530,911	+				-1.3
2,530,912	+				-3.7
2,530,912	+				-2.5
2,530,912	+				-3.4
2,530,912	+				-1.6
2,530,917	+				-0.5
2,530,920	-				-3.5
2,530,925	-				-2.4
2,530,925	-				-3.0
2,530,943	-				-2.8
2,530,954	+				-0.0
2,530,954	+				-2.2
2,530,960	+				-3.0
2,530,962	-				-4.0
2,530,962	-				-2.9
2,530,966	+				-1.5
2,530,986	+				-3.6
2,530,986	+				-1.0
2,530,993	+	pilM	Synpcc7942_2453	0.11	-2.3
2,530,994	+	pilM	Synpcc7942_2453	0.11	-3.9
2,530,994	-	pilM	Synpcc7942_2453	0.11	-2.9
2,530,994	-				-2.0
2,530,994	-	pilM	Synpcc7942_2453	0.11	-1.6
2,530,994	-	pilM	Synpcc7942_2453	0.11	-2.4
2,530,994	-	pilM	Synpcc7942_2453	0.11	-2.5
2,530,994	-	pilM	Synpcc7942_2453	0.11	-1.4
2,530,998	+	pilM	Synpcc7942_2453	0.11	-3.5
2,530,999	+	pilM	Synpcc7942_2453	0.11	-2.0
2,531,007	-	pilM	Synpcc7942_2453	0.12	-2.6
2,531,028	+	pilM	Synpcc7942_2453	0.14	-3.0
2,531,028	+	pilM	Synpcc7942_2453	0.14	-3.4
2,531,028	+	pilM	Synpcc7942_2453	0.14	-1.0
2,531,036	-	pilM	Synpcc7942_2453	0.15	-2.4
2,531,044	+	pilM	Synpcc7942_2453	0.15	-0.0
2,531,044	+	pilM	Synpcc7942_2453	0.15	-2.0
2,531,050	-	pilM	Synpcc7942_2453	0.16	-1.6
2,531,052	-	pilM	Synpcc7942_2453	0.16	-2.0
2,531,057	+	pilM	Synpcc7942_2453	0.16	-2.0
2,531,065	-	pilM	Synpcc7942_2453	0.17	-1.8
2,531,081	-	pilM	Synpcc7942_2453	0.19	-2.5
2,531,096	+	pilM	Synpcc7942_2453	0.20	-3.4
2,531,097	+	pilM	Synpcc7942_2453	0.20	-1.4
2,531,104	-	pilM	Synpcc7942_2453	0.21	-2.8
2,531,104	-	pilM	Synpcc7942_2453	0.21	-2.1
2,531,121	+	pilM	Synpcc7942_2453	0.22	-2.0
2,531,121	-	pilM	Synpcc7942_2453	0.22	-2.5
2,531,129	-	pilM	Synpcc7942_2453	0.23	-2.8
2,531,133	+	pilM	Synpcc7942_2453	0.24	-0.0
2,531,154	+	pilM	Synpcc7942_2453	0.25	-2.2
2,531,154	+	pilM	Synpcc7942_2453	0.25	-1.7
2,531,156	+	pilM	Synpcc7942_2453	0.26	-1.9
2,531,157	-	pilM	Synpcc7942_2453	0.26	-0.8
2,531,159	+	pilM	Synpcc7942_2453	0.26	-2.3