Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2425

Experiment: D-Cycloserine 0.015625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.015625 mg/ml
2,496,796	-				+1.8
2,496,862	-				-0.8
2,496,864	+				-0.6
2,496,864	+				+2.5
2,496,872	-				+0.9
2,496,885	-				+0.6
2,496,887	+				+0.8
2,496,903	+				-2.6
2,496,921	-		Synpcc7942_2424	0.12	+0.2
2,496,921	-		Synpcc7942_2424	0.12	-0.6
2,496,935	+		Synpcc7942_2424	0.14	-1.9
2,496,946	+		Synpcc7942_2424	0.15	+0.5
2,496,954	-		Synpcc7942_2424	0.16	+0.5
2,496,971	+		Synpcc7942_2424	0.18	-0.2
2,496,979	-		Synpcc7942_2424	0.19	+2.0
2,497,005	+		Synpcc7942_2424	0.23	-0.8
2,497,040	-				-0.1
2,497,041	-		Synpcc7942_2424	0.27	-0.4
2,497,054	+		Synpcc7942_2424	0.29	-1.6
2,497,076	+		Synpcc7942_2424	0.31	+0.2
2,497,076	+		Synpcc7942_2424	0.31	+0.3
2,497,083	+				-0.1
2,497,083	-		Synpcc7942_2424	0.32	-0.2
2,497,084	-		Synpcc7942_2424	0.32	+0.8
2,497,084	-		Synpcc7942_2424	0.32	-0.6
2,497,084	-		Synpcc7942_2424	0.32	-1.4
2,497,085	+		Synpcc7942_2424	0.32	-0.1
2,497,091	+		Synpcc7942_2424	0.33	+0.2
2,497,099	-		Synpcc7942_2424	0.34	+1.4
2,497,126	+		Synpcc7942_2424	0.38	+0.3
2,497,136	+		Synpcc7942_2424	0.39	-0.5
2,497,230	-		Synpcc7942_2424	0.50	+0.4
2,497,247	+		Synpcc7942_2424	0.53	-0.5
2,497,255	-		Synpcc7942_2424	0.54	+0.7
2,497,290	+		Synpcc7942_2424	0.58	+1.9
2,497,292	+		Synpcc7942_2424	0.58	-1.3
2,497,292	+		Synpcc7942_2424	0.58	+0.1
2,497,297	+		Synpcc7942_2424	0.59	-1.5
2,497,298	+		Synpcc7942_2424	0.59	-0.9
2,497,305	-		Synpcc7942_2424	0.60	+0.5
2,497,305	-		Synpcc7942_2424	0.60	-0.5
2,497,305	-		Synpcc7942_2424	0.60	+0.8
2,497,317	+		Synpcc7942_2424	0.61	-1.0
2,497,339	-		Synpcc7942_2424	0.64	+0.2
2,497,342	-		Synpcc7942_2424	0.64	+0.5
2,497,344	-		Synpcc7942_2424	0.65	+0.5
2,497,344	-		Synpcc7942_2424	0.65	-0.3
2,497,357	-		Synpcc7942_2424	0.66	+0.2
2,497,424	+		Synpcc7942_2424	0.75	+0.8
2,497,426	+		Synpcc7942_2424	0.75	+0.3
2,497,430	+		Synpcc7942_2424	0.75	+0.7
2,497,461	+		Synpcc7942_2424	0.79	-1.6
2,497,471	+		Synpcc7942_2424	0.80	-0.1
2,497,471	+		Synpcc7942_2424	0.80	+0.6
2,497,479	-		Synpcc7942_2424	0.81	+0.4
2,497,479	-		Synpcc7942_2424	0.81	-2.4
2,497,479	-		Synpcc7942_2424	0.81	+0.9
2,497,479	-		Synpcc7942_2424	0.81	+0.3
2,497,487	-		Synpcc7942_2424	0.82	+0.9
2,497,510	-		Synpcc7942_2424	0.85	+0.7
2,497,530	-		Synpcc7942_2424	0.88	+0.3
2,497,532	-		Synpcc7942_2424	0.88	-1.1
2,497,565	-				-0.1
2,497,639	-				-0.5
2,497,662	+				-1.5
2,497,662	+				-0.6
2,497,662	+				-2.2
2,497,662	+				-0.1
2,497,668	-				+1.5
2,497,668	-				-0.1
2,497,670	-				-0.1
2,497,670	-				+0.6
2,497,670	-				+1.4
2,497,670	-				+0.1
2,497,670	-				-0.1
2,497,670	-				-0.2
2,497,683	-				+1.3
2,497,697	+				-0.1
2,497,697	+				+1.0
2,497,705	-				-0.8
2,497,749	+				-3.2
2,497,759	-				-1.3
2,497,795	+				-2.4
2,497,795	-				-1.1
2,497,847	+	ycf39	Synpcc7942_2425	0.15	-2.6
2,497,902	-	ycf39	Synpcc7942_2425	0.21	-2.6
2,497,929	-	ycf39	Synpcc7942_2425	0.24	-2.6
2,497,953	+	ycf39	Synpcc7942_2425	0.26	-3.1
2,497,990	-	ycf39	Synpcc7942_2425	0.30	-2.6
2,498,097	-	ycf39	Synpcc7942_2425	0.41	-1.3
2,498,118	+	ycf39	Synpcc7942_2425	0.44	-0.5
2,498,121	-	ycf39	Synpcc7942_2425	0.44	-1.1
2,498,214	-	ycf39	Synpcc7942_2425	0.53	-2.4
2,498,225	-	ycf39	Synpcc7942_2425	0.55	-1.1
2,498,282	-	ycf39	Synpcc7942_2425	0.61	-2.6
2,498,362	+	ycf39	Synpcc7942_2425	0.69	+0.5
2,498,375	+	ycf39	Synpcc7942_2425	0.70	-3.3
2,498,383	-	ycf39	Synpcc7942_2425	0.71	+1.5
2,498,385	+	ycf39	Synpcc7942_2425	0.71	-0.1
2,498,430	-	ycf39	Synpcc7942_2425	0.76	-0.4
2,498,468	+	ycf39	Synpcc7942_2425	0.80	-2.1
2,498,556	+	ycf39	Synpcc7942_2425	0.89	-0.7
2,498,556	+	ycf39	Synpcc7942_2425	0.89	-2.1
2,498,564	-	ycf39	Synpcc7942_2425	0.90	-2.4
2,498,564	-	ycf39	Synpcc7942_2425	0.90	-0.1
2,498,564	-	ycf39	Synpcc7942_2425	0.90	-1.6
2,498,576	-				-2.1
2,498,577	+				-0.1
2,498,659	+				+0.2
2,498,704	+				+1.2
2,498,716	+				-0.8
2,498,726	+				-0.5
2,498,741	+				+0.2
2,498,755	+				-0.6
2,498,765	-				+0.1
2,498,770	-				+1.1
2,498,862	-	petM	Synpcc7942_2426	0.72	-2.6
2,498,902	-				-0.1
2,498,915	-				-1.6
2,498,925	-				-2.9
2,498,968	+				+0.3
2,498,981	+				-0.6
2,498,986	+				+0.7
2,498,989	-				+0.3
2,498,991	+				+0.4
2,499,035	-				-1.1
2,499,054	+				+0.8
2,499,057	-		Synpcc7942_2427	0.10	+0.9
2,499,064	+		Synpcc7942_2427	0.11	-0.9
2,499,068	+		Synpcc7942_2427	0.11	+0.7
2,499,072	-		Synpcc7942_2427	0.12	+0.5
2,499,075	+		Synpcc7942_2427	0.12	-0.1
2,499,076	-				+1.5
2,499,076	-		Synpcc7942_2427	0.12	-1.6
2,499,085	+		Synpcc7942_2427	0.13	+0.5
2,499,098	+		Synpcc7942_2427	0.15	+0.9
2,499,103	+		Synpcc7942_2427	0.16	+0.2
2,499,103	-		Synpcc7942_2427	0.16	+0.9
2,499,104	-		Synpcc7942_2427	0.16	+1.4
2,499,106	-		Synpcc7942_2427	0.16	+0.5
2,499,151	-		Synpcc7942_2427	0.21	+0.5
2,499,173	-		Synpcc7942_2427	0.24	-0.2
2,499,174	-		Synpcc7942_2427	0.24	+0.4
2,499,176	+		Synpcc7942_2427	0.24	-0.2
2,499,190	+		Synpcc7942_2427	0.26	-1.1
2,499,193	-		Synpcc7942_2427	0.26	-0.1
2,499,198	-		Synpcc7942_2427	0.27	+1.2
2,499,198	-		Synpcc7942_2427	0.27	-0.2
2,499,211	-		Synpcc7942_2427	0.28	-0.6
2,499,212	-		Synpcc7942_2427	0.28	+0.6
2,499,237	-		Synpcc7942_2427	0.31	-0.5
2,499,240	+		Synpcc7942_2427	0.32	+1.7
2,499,291	+		Synpcc7942_2427	0.38	+1.3
2,499,301	+		Synpcc7942_2427	0.39	+0.3
2,499,309	-		Synpcc7942_2427	0.40	+0.5
2,499,337	-		Synpcc7942_2427	0.43	-1.6
2,499,367	-		Synpcc7942_2427	0.47	-0.7
2,499,417	-		Synpcc7942_2427	0.53	+1.3
2,499,429	-		Synpcc7942_2427	0.54	+0.5
2,499,461	-		Synpcc7942_2427	0.58	-0.1
2,499,461	-		Synpcc7942_2427	0.58	-2.4
2,499,461	-		Synpcc7942_2427	0.58	+0.0
2,499,464	+		Synpcc7942_2427	0.58	-1.1
2,499,469	+		Synpcc7942_2427	0.59	-1.1
2,499,490	-		Synpcc7942_2427	0.61	+0.2
2,499,511	+		Synpcc7942_2427	0.64	-0.3
2,499,587	+				-0.1
2,499,595	-		Synpcc7942_2427	0.74	+1.7
2,499,601	+		Synpcc7942_2427	0.75	-1.5
2,499,657	-		Synpcc7942_2427	0.81	+1.9
2,499,657	-		Synpcc7942_2427	0.81	+0.9