Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2351

Experiment: D-Cycloserine 0.015625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.015625 mg/ml
2,417,311	-	pilT	Synpcc7942_2349	0.77	+0.3
2,417,386	+	pilT	Synpcc7942_2349	0.84	-1.1
2,417,526	+				+0.4
2,417,540	+				+1.4
2,417,562	+				-0.5
2,417,574	+				-2.4
2,417,590	+				-0.6
2,417,598	-				+2.7
2,417,619	+				+0.3
2,417,627	-				+0.5
2,417,627	-				-2.1
2,417,627	-				-1.1
2,417,642	+				-0.6
2,417,643	-				+0.5
2,417,660	-				+1.0
2,417,677	+		Synpcc7942_2350	0.12	+1.9
2,417,677	+		Synpcc7942_2350	0.12	+0.4
2,417,685	-		Synpcc7942_2350	0.13	+0.3
2,417,687	+		Synpcc7942_2350	0.13	-0.7
2,417,706	+		Synpcc7942_2350	0.16	-0.4
2,417,774	+		Synpcc7942_2350	0.26	-0.1
2,417,775	+		Synpcc7942_2350	0.26	-1.1
2,417,782	-		Synpcc7942_2350	0.27	+0.9
2,417,824	+		Synpcc7942_2350	0.33	+0.3
2,417,832	-		Synpcc7942_2350	0.34	-0.9
2,417,832	-		Synpcc7942_2350	0.34	+0.9
2,417,859	-		Synpcc7942_2350	0.38	+1.5
2,417,984	-		Synpcc7942_2350	0.56	-0.7
2,418,002	+		Synpcc7942_2350	0.58	-1.1
2,418,002	+		Synpcc7942_2350	0.58	-0.4
2,418,002	-		Synpcc7942_2350	0.58	+1.8
2,418,010	-		Synpcc7942_2350	0.59	+1.5
2,418,058	+		Synpcc7942_2350	0.66	+0.9
2,418,066	-		Synpcc7942_2350	0.67	-2.4
2,418,098	-		Synpcc7942_2350	0.72	-0.0
2,418,098	-		Synpcc7942_2350	0.72	-0.5
2,418,100	-		Synpcc7942_2350	0.72	-0.1
2,418,131	-		Synpcc7942_2350	0.77	-0.3
2,418,140	-		Synpcc7942_2350	0.78	-3.4
2,418,140	-		Synpcc7942_2350	0.78	-1.3
2,418,142	+		Synpcc7942_2350	0.78	-1.1
2,418,142	+		Synpcc7942_2350	0.78	+0.3
2,418,157	+		Synpcc7942_2350	0.80	-0.0
2,418,165	-		Synpcc7942_2350	0.81	-0.3
2,418,192	-		Synpcc7942_2350	0.85	+0.9
2,418,202	+		Synpcc7942_2350	0.87	-0.2
2,418,202	-		Synpcc7942_2350	0.87	-1.2
2,418,233	-				-0.5
2,418,233	-				-3.1
2,418,247	+				+1.9
2,418,255	-				-0.7
2,418,263	-				+1.9
2,418,263	-				-1.1
2,418,265	+				+0.9
2,418,265	+				+1.5
2,418,265	+				+0.4
2,418,273	-				+1.5
2,418,291	+				+0.9
2,418,291	+				+0.5
2,418,306	-				-0.8
2,418,714	-		Synpcc7942_2351	0.33	-0.6
2,419,052	-		Synpcc7942_2351	0.61	-0.7
2,419,053	+		Synpcc7942_2351	0.61	-2.9
2,419,118	+		Synpcc7942_2351	0.67	-1.4
2,419,556	-				-0.4
2,419,573	+				-0.8
2,419,593	-				+0.3
2,419,593	-				-0.5
2,419,723	-	lrtA	Synpcc7942_2352	0.24	-0.9
2,419,729	+	lrtA	Synpcc7942_2352	0.25	-1.3
2,419,766	-	lrtA	Synpcc7942_2352	0.31	-0.1
2,419,767	-	lrtA	Synpcc7942_2352	0.31	+1.1
2,419,879	+	lrtA	Synpcc7942_2352	0.49	+1.3
2,419,879	+	lrtA	Synpcc7942_2352	0.49	+0.4
2,420,231	+				-0.2
2,420,309	+				-0.4
2,420,386	+				+0.4