Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2316

Experiment: D-Cycloserine 0.015625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.015625 mg/ml
2,385,625	+	atpE	Synpcc7942_2316	0.56	-3.1
2,385,628	-	atpE	Synpcc7942_2316	0.56	-1.1
2,385,678	+	atpE	Synpcc7942_2316	0.68	+1.2
2,385,744	-	atpE	Synpcc7942_2316	0.84	-2.9
2,385,754	-	atpE	Synpcc7942_2316	0.87	-0.7
2,385,773	+				+0.5
2,385,773	+				-2.1
2,385,775	+				-0.5
2,385,852	+				+0.8
2,385,852	+				-1.2
2,385,860	-				-1.3
2,385,860	-				-1.1
2,385,860	-				-1.4
2,385,861	-				+1.2
2,385,874	+				+1.9
2,385,876	+				-3.5
2,385,884	-				-0.1
2,385,917	-				-0.7
2,385,930	-				-2.7
2,386,000	+				-0.6
2,386,034	-				+1.5
2,386,055	-				+0.8
2,386,055	-				-2.1
2,386,055	-				+1.4
2,386,104	+				+0.5
2,386,119	+				+0.7
2,386,153	+				+1.1
2,386,160	+				-0.9
2,386,161	-				+0.4
2,386,161	-				-1.7
2,386,161	-				+0.5
2,386,168	-				-0.7
2,386,168	-				-0.9
2,386,168	-				+0.5
2,386,168	-				+1.1
2,386,176	+				-0.5
2,386,190	-				+1.2
2,386,222	+				-1.3
2,386,230	-				-0.6
2,386,297	-				-1.2
2,386,315	+				-0.7
2,386,320	+				-2.1
2,386,320	+				-0.1
2,386,323	-				+1.5
2,386,323	-				+1.1
2,386,328	-				-1.1
2,386,376	+				-0.1
2,386,384	-				+0.9
2,386,384	-				-0.1
2,386,452	-	ctaA	Synpcc7942_2317	0.10	-0.5
2,386,456	+	ctaA	Synpcc7942_2317	0.11	-0.1
2,386,479	-	ctaA	Synpcc7942_2317	0.12	+1.2
2,386,482	+	ctaA	Synpcc7942_2317	0.12	-1.1
2,386,487	+	ctaA	Synpcc7942_2317	0.12	-3.2
2,386,492	+	ctaA	Synpcc7942_2317	0.12	-1.7
2,386,492	+	ctaA	Synpcc7942_2317	0.12	-0.3
2,386,492	+	ctaA	Synpcc7942_2317	0.12	-0.5
2,386,492	+	ctaA	Synpcc7942_2317	0.12	-1.6
2,386,492	+	ctaA	Synpcc7942_2317	0.12	+0.7
2,386,492	+	ctaA	Synpcc7942_2317	0.12	-1.1
2,386,492	+	ctaA	Synpcc7942_2317	0.12	+0.5
2,386,500	-	ctaA	Synpcc7942_2317	0.12	-0.3
2,386,500	-	ctaA	Synpcc7942_2317	0.12	-1.1
2,386,500	-	ctaA	Synpcc7942_2317	0.12	-0.1
2,386,500	-	ctaA	Synpcc7942_2317	0.12	+0.3
2,386,500	-	ctaA	Synpcc7942_2317	0.12	+0.9
2,386,500	-	ctaA	Synpcc7942_2317	0.12	-0.6
2,386,500	-	ctaA	Synpcc7942_2317	0.12	-0.9
2,386,500	-	ctaA	Synpcc7942_2317	0.12	+0.4
2,386,533	-	ctaA	Synpcc7942_2317	0.14	-0.5
2,386,587	+				+1.9
2,386,594	+	ctaA	Synpcc7942_2317	0.16	-0.5
2,386,673	-	ctaA	Synpcc7942_2317	0.20	-0.1
2,386,723	+	ctaA	Synpcc7942_2317	0.22	-1.6
2,386,783	+	ctaA	Synpcc7942_2317	0.24	+0.9
2,386,797	+	ctaA	Synpcc7942_2317	0.25	-0.2
2,386,805	-				-0.1
2,386,807	+	ctaA	Synpcc7942_2317	0.25	-0.5