Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2285

Experiment: D-Cycloserine 0.015625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.015625 mg/ml
2,353,865	+				-0.8
2,353,912	+				-0.2
2,353,915	-				+3.2
2,353,917	+				-0.4
2,353,932	-				+0.6
2,353,932	-				-0.3
2,353,957	-	todF	Synpcc7942_2284	0.11	-0.7
2,353,957	-	todF	Synpcc7942_2284	0.11	-2.4
2,353,958	+	todF	Synpcc7942_2284	0.11	-1.4
2,353,966	-	todF	Synpcc7942_2284	0.12	+0.3
2,353,966	-	todF	Synpcc7942_2284	0.12	+1.9
2,353,975	-	todF	Synpcc7942_2284	0.12	-0.5
2,353,989	-	todF	Synpcc7942_2284	0.14	+1.5
2,354,011	+	todF	Synpcc7942_2284	0.16	+0.9
2,354,027	+	todF	Synpcc7942_2284	0.18	+0.6
2,354,027	+	todF	Synpcc7942_2284	0.18	-1.4
2,354,027	+	todF	Synpcc7942_2284	0.18	-4.2
2,354,027	+	todF	Synpcc7942_2284	0.18	-0.1
2,354,027	+	todF	Synpcc7942_2284	0.18	-0.5
2,354,027	+	todF	Synpcc7942_2284	0.18	-1.8
2,354,027	+	todF	Synpcc7942_2284	0.18	-0.4
2,354,027	+	todF	Synpcc7942_2284	0.18	-1.1
2,354,035	-	todF	Synpcc7942_2284	0.19	-0.7
2,354,035	-	todF	Synpcc7942_2284	0.19	+1.2
2,354,055	+	todF	Synpcc7942_2284	0.21	-2.4
2,354,058	-	todF	Synpcc7942_2284	0.22	+2.2
2,354,062	-	todF	Synpcc7942_2284	0.22	-0.1
2,354,063	-	todF	Synpcc7942_2284	0.22	-0.1
2,354,074	+	todF	Synpcc7942_2284	0.23	-1.1
2,354,074	+	todF	Synpcc7942_2284	0.23	+0.5
2,354,082	-	todF	Synpcc7942_2284	0.24	-0.7
2,354,107	+	todF	Synpcc7942_2284	0.27	-1.1
2,354,107	+	todF	Synpcc7942_2284	0.27	-0.5
2,354,115	-	todF	Synpcc7942_2284	0.28	-0.1
2,354,163	-	todF	Synpcc7942_2284	0.33	+0.7
2,354,163	-	todF	Synpcc7942_2284	0.33	-0.3
2,354,174	+	todF	Synpcc7942_2284	0.34	-2.4
2,354,174	+	todF	Synpcc7942_2284	0.34	+0.2
2,354,174	+	todF	Synpcc7942_2284	0.34	+0.5
2,354,192	+	todF	Synpcc7942_2284	0.36	+0.5
2,354,223	+	todF	Synpcc7942_2284	0.40	+0.4
2,354,223	+	todF	Synpcc7942_2284	0.40	+1.1
2,354,231	-	todF	Synpcc7942_2284	0.41	+0.2
2,354,265	-	todF	Synpcc7942_2284	0.44	-0.6
2,354,285	+	todF	Synpcc7942_2284	0.46	-1.1
2,354,285	+	todF	Synpcc7942_2284	0.46	+0.7
2,354,293	-	todF	Synpcc7942_2284	0.47	-0.3
2,354,306	-	todF	Synpcc7942_2284	0.49	+1.5
2,354,306	-	todF	Synpcc7942_2284	0.49	-0.9
2,354,345	+	todF	Synpcc7942_2284	0.53	+0.6
2,354,350	+	todF	Synpcc7942_2284	0.54	+1.2
2,354,390	+	todF	Synpcc7942_2284	0.58	-0.1
2,354,435	+	todF	Synpcc7942_2284	0.63	-0.4
2,354,442	-	todF	Synpcc7942_2284	0.64	-1.1
2,354,448	+	todF	Synpcc7942_2284	0.64	+2.7
2,354,477	+	todF	Synpcc7942_2284	0.68	+0.3
2,354,486	-	todF	Synpcc7942_2284	0.69	-0.5
2,354,512	+	todF	Synpcc7942_2284	0.71	-1.2
2,354,512	+	todF	Synpcc7942_2284	0.71	+0.9
2,354,512	+	todF	Synpcc7942_2284	0.71	+0.5
2,354,512	+	todF	Synpcc7942_2284	0.71	-1.1
2,354,512	+	todF	Synpcc7942_2284	0.71	-0.1
2,354,512	+	todF	Synpcc7942_2284	0.71	-0.2
2,354,520	-	todF	Synpcc7942_2284	0.72	+1.5
2,354,522	-	todF	Synpcc7942_2284	0.72	-0.7
2,354,537	+	todF	Synpcc7942_2284	0.74	+1.5
2,354,587	+	todF	Synpcc7942_2284	0.80	+0.3
2,354,594	+	todF	Synpcc7942_2284	0.80	-1.1
2,354,602	-	todF	Synpcc7942_2284	0.81	+0.3
2,354,602	-	todF	Synpcc7942_2284	0.81	+1.5
2,354,619	+	todF	Synpcc7942_2284	0.83	+1.8
2,354,626	-	todF	Synpcc7942_2284	0.84	+0.6
2,354,636	-	todF	Synpcc7942_2284	0.85	-0.6
2,354,644	+	todF	Synpcc7942_2284	0.86	-0.1
2,354,661	+	todF	Synpcc7942_2284	0.88	+1.3
2,354,688	-				-0.5
2,354,696	+				-0.4
2,354,726	-				+0.2
2,354,732	-				-0.5
2,354,741	-				+0.0
2,354,774	-				+0.9
2,354,780	+				-0.1
2,354,785	+				+1.7
2,354,790	-				+0.9
2,354,812	-				+0.3
2,354,869	+				-0.1
2,354,889	+	gldA	Synpcc7942_2285	0.11	+1.5
2,354,897	-	gldA	Synpcc7942_2285	0.12	-0.8
2,354,897	-	gldA	Synpcc7942_2285	0.12	-2.9
2,354,897	-	gldA	Synpcc7942_2285	0.12	-1.1
2,354,902	-	gldA	Synpcc7942_2285	0.12	-1.7
2,354,907	+	gldA	Synpcc7942_2285	0.13	-1.1
2,354,915	+	gldA	Synpcc7942_2285	0.14	-1.1
2,354,923	-	gldA	Synpcc7942_2285	0.14	-1.4
2,354,930	-	gldA	Synpcc7942_2285	0.15	-2.7
2,354,931	+	gldA	Synpcc7942_2285	0.15	-0.1
2,354,931	+	gldA	Synpcc7942_2285	0.15	-3.4
2,354,931	+	gldA	Synpcc7942_2285	0.15	-2.4
2,354,942	+	gldA	Synpcc7942_2285	0.16	-2.2
2,354,950	-	gldA	Synpcc7942_2285	0.17	-1.7
2,354,972	-	gldA	Synpcc7942_2285	0.19	-0.1
2,354,974	+	gldA	Synpcc7942_2285	0.19	-0.7
2,354,982	-	gldA	Synpcc7942_2285	0.20	-0.9
2,355,032	+	gldA	Synpcc7942_2285	0.24	+0.9
2,355,032	-	gldA	Synpcc7942_2285	0.24	-2.0
2,355,092	+	gldA	Synpcc7942_2285	0.30	-2.7
2,355,119	-	gldA	Synpcc7942_2285	0.32	-0.1
2,355,128	+	gldA	Synpcc7942_2285	0.33	-1.7
2,355,133	-	gldA	Synpcc7942_2285	0.34	-1.4
2,355,150	+	gldA	Synpcc7942_2285	0.35	-2.8
2,355,158	-	gldA	Synpcc7942_2285	0.36	-1.4
2,355,168	-	gldA	Synpcc7942_2285	0.37	-2.6
2,355,170	-	gldA	Synpcc7942_2285	0.37	-0.1
2,355,170	-	gldA	Synpcc7942_2285	0.37	-1.9
2,355,201	-	gldA	Synpcc7942_2285	0.40	-2.3
2,355,209	+	gldA	Synpcc7942_2285	0.41	-2.3
2,355,209	-				-0.1
2,355,216	+	gldA	Synpcc7942_2285	0.41	-2.1
2,355,226	+	gldA	Synpcc7942_2285	0.42	-3.8
2,355,286	-	gldA	Synpcc7942_2285	0.48	+0.3
2,355,286	-	gldA	Synpcc7942_2285	0.48	-1.4
2,355,288	+	gldA	Synpcc7942_2285	0.48	-1.7
2,355,329	-	gldA	Synpcc7942_2285	0.52	-2.1
2,355,333	+	gldA	Synpcc7942_2285	0.52	-1.0
2,355,333	+	gldA	Synpcc7942_2285	0.52	-1.1
2,355,344	-	gldA	Synpcc7942_2285	0.53	-0.1
2,355,351	-	gldA	Synpcc7942_2285	0.54	-1.5
2,355,398	-	gldA	Synpcc7942_2285	0.58	-4.1
2,355,421	-	gldA	Synpcc7942_2285	0.60	-3.5
2,355,421	-	gldA	Synpcc7942_2285	0.60	-3.3
2,355,434	+	gldA	Synpcc7942_2285	0.62	-4.8
2,355,442	-	gldA	Synpcc7942_2285	0.62	-1.5
2,355,444	+	gldA	Synpcc7942_2285	0.62	-1.3
2,355,460	+	gldA	Synpcc7942_2285	0.64	-1.2
2,355,467	+	gldA	Synpcc7942_2285	0.65	-3.3
2,355,475	-	gldA	Synpcc7942_2285	0.65	-1.1
2,355,491	-	gldA	Synpcc7942_2285	0.67	-1.8
2,355,492	-	gldA	Synpcc7942_2285	0.67	-2.4
2,355,503	-	gldA	Synpcc7942_2285	0.68	-0.1
2,355,504	+	gldA	Synpcc7942_2285	0.68	+0.5
2,355,513	-	gldA	Synpcc7942_2285	0.69	-1.4
2,355,514	+	gldA	Synpcc7942_2285	0.69	+0.9
2,355,531	+	gldA	Synpcc7942_2285	0.71	-1.1
2,355,539	-	gldA	Synpcc7942_2285	0.71	-1.4
2,355,541	+	gldA	Synpcc7942_2285	0.71	-3.3
2,355,544	-	gldA	Synpcc7942_2285	0.72	-1.1
2,355,549	-	gldA	Synpcc7942_2285	0.72	-1.7
2,355,568	-	gldA	Synpcc7942_2285	0.74	-0.1
2,355,573	-	gldA	Synpcc7942_2285	0.74	+0.6
2,355,593	-	gldA	Synpcc7942_2285	0.76	-2.5
2,355,598	+	gldA	Synpcc7942_2285	0.77	-1.1
2,355,646	+	gldA	Synpcc7942_2285	0.81	-1.5
2,355,676	-	gldA	Synpcc7942_2285	0.84	-0.1
2,355,716	+	gldA	Synpcc7942_2285	0.88	-0.7
2,355,716	+	gldA	Synpcc7942_2285	0.88	-2.3
2,355,716	+	gldA	Synpcc7942_2285	0.88	-0.7
2,355,724	-	gldA	Synpcc7942_2285	0.88	-3.1
2,355,724	-	gldA	Synpcc7942_2285	0.88	-2.7
2,355,724	-	gldA	Synpcc7942_2285	0.88	-1.9
2,355,724	-	gldA	Synpcc7942_2285	0.88	-2.7
2,355,724	-	gldA	Synpcc7942_2285	0.88	-0.7
2,355,741	+				-2.9
2,355,741	+				+0.9
2,355,749	-				-1.1
2,355,749	-				-0.4
2,355,759	+				-2.4
2,355,776	+				-0.1
2,355,776	+				-2.7
2,355,784	-				-1.3
2,355,819	+				-0.1
2,355,821	-				-1.1
2,355,884	-				-1.1
2,355,886	+				-0.8
2,355,894	-				-0.7
2,355,909	+				-0.1
2,355,922	+				-0.8
2,355,922	+				-2.3
2,355,922	+				-1.4
2,355,922	+				+0.9
2,355,922	+				+0.9
2,355,930	-				-1.4
2,355,978	+				+0.6
2,355,986	-				+1.0
2,355,990	+				+0.9
2,356,000	+				+1.6
2,356,000	+				+0.4
2,356,003	-				+1.0
2,356,008	-				+0.6
2,356,577	-		Synpcc7942_2286	0.56	-2.9