Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2177

Experiment: D-Cycloserine 0.015625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.015625 mg/ml
2,256,143	-	dpsA	Synpcc7942_2176	0.17	+0.2
2,256,150	-	dpsA	Synpcc7942_2176	0.17	+1.5
2,256,172	+	dpsA	Synpcc7942_2176	0.19	+0.9
2,256,180	-	dpsA	Synpcc7942_2176	0.20	+0.8
2,256,195	+	dpsA	Synpcc7942_2176	0.21	-0.1
2,256,213	-	dpsA	Synpcc7942_2176	0.23	-1.9
2,256,218	-	dpsA	Synpcc7942_2176	0.23	-0.9
2,256,232	+	dpsA	Synpcc7942_2176	0.25	+0.2
2,256,240	-	dpsA	Synpcc7942_2176	0.25	-0.6
2,256,260	-	dpsA	Synpcc7942_2176	0.27	-0.9
2,256,357	+	dpsA	Synpcc7942_2176	0.35	+1.0
2,256,360	-	dpsA	Synpcc7942_2176	0.36	-0.1
2,256,362	+	dpsA	Synpcc7942_2176	0.36	-0.5
2,256,365	-	dpsA	Synpcc7942_2176	0.36	-0.3
2,256,365	-	dpsA	Synpcc7942_2176	0.36	-0.9
2,256,406	+	dpsA	Synpcc7942_2176	0.40	-0.6
2,256,406	+	dpsA	Synpcc7942_2176	0.40	-0.2
2,256,437	-	dpsA	Synpcc7942_2176	0.42	-0.2
2,256,444	-	dpsA	Synpcc7942_2176	0.43	-0.1
2,256,475	+	dpsA	Synpcc7942_2176	0.46	+0.4
2,256,483	-	dpsA	Synpcc7942_2176	0.46	+0.4
2,256,483	-	dpsA	Synpcc7942_2176	0.46	-1.6
2,256,485	-	dpsA	Synpcc7942_2176	0.47	-1.6
2,256,527	-	dpsA	Synpcc7942_2176	0.50	+0.7
2,256,576	-	dpsA	Synpcc7942_2176	0.55	+2.7
2,256,578	+				+0.9
2,256,578	+	dpsA	Synpcc7942_2176	0.55	-0.1
2,256,578	+				-2.1
2,256,586	+	dpsA	Synpcc7942_2176	0.55	+0.2
2,256,586	-	dpsA	Synpcc7942_2176	0.55	+0.9
2,256,586	-	dpsA	Synpcc7942_2176	0.55	+1.3
2,256,586	-	dpsA	Synpcc7942_2176	0.55	-0.2
2,256,600	+	dpsA	Synpcc7942_2176	0.57	-0.6
2,256,600	+	dpsA	Synpcc7942_2176	0.57	+0.7
2,256,600	+	dpsA	Synpcc7942_2176	0.57	+0.4
2,256,600	+	dpsA	Synpcc7942_2176	0.57	+0.6
2,256,600	+	dpsA	Synpcc7942_2176	0.57	-0.6
2,256,608	-	dpsA	Synpcc7942_2176	0.57	-1.6
2,256,608	-	dpsA	Synpcc7942_2176	0.57	-1.0
2,256,608	-	dpsA	Synpcc7942_2176	0.57	+1.3
2,256,608	-	dpsA	Synpcc7942_2176	0.57	-0.1
2,256,609	-	dpsA	Synpcc7942_2176	0.57	+0.9
2,256,615	+	dpsA	Synpcc7942_2176	0.58	+1.1
2,256,615	+	dpsA	Synpcc7942_2176	0.58	-0.6
2,256,628	-	dpsA	Synpcc7942_2176	0.59	+0.6
2,256,630	-	dpsA	Synpcc7942_2176	0.59	+0.9
2,256,646	+	dpsA	Synpcc7942_2176	0.61	-0.4
2,256,652	-	dpsA	Synpcc7942_2176	0.61	+0.9
2,256,653	-	dpsA	Synpcc7942_2176	0.61	-0.5
2,256,676	-	dpsA	Synpcc7942_2176	0.63	+1.9
2,256,728	-	dpsA	Synpcc7942_2176	0.68	-2.2
2,256,800	+	dpsA	Synpcc7942_2176	0.74	-1.2
2,256,818	+	dpsA	Synpcc7942_2176	0.76	-0.3
2,256,839	-	dpsA	Synpcc7942_2176	0.77	+0.4
2,256,874	-	dpsA	Synpcc7942_2176	0.81	+0.9
2,256,887	+	dpsA	Synpcc7942_2176	0.82	+0.6
2,256,890	-	dpsA	Synpcc7942_2176	0.82	+1.9
2,256,890	-	dpsA	Synpcc7942_2176	0.82	+0.9
2,256,915	+	dpsA	Synpcc7942_2176	0.84	-2.6
2,256,972	-	dpsA	Synpcc7942_2176	0.89	-0.1
2,256,974	-	dpsA	Synpcc7942_2176	0.89	-0.3
2,256,991	-				-0.2
2,256,991	-				+0.7
2,257,000	+				+0.7
2,257,008	-				+1.6
2,257,042	+				-2.6
2,257,050	-				+0.7
2,257,053	+				+0.9
2,257,064	+				-0.8
2,257,072	-				-0.1
2,257,131	+				-0.6
2,257,138	-				-0.1
2,257,167	+				-1.5
2,257,167	+				+0.1
2,257,168	+				+0.7
2,257,168	+				+1.4
2,257,176	-				-1.1
2,257,177	+				-1.6
2,257,185	-				-2.1
2,257,197	+				-0.1
2,257,207	-				+0.5
2,257,224	+				+1.5
2,257,232	-	natD	Synpcc7942_2177	0.10	+0.9
2,257,232	-	natD	Synpcc7942_2177	0.10	+0.2
2,257,232	-	natD	Synpcc7942_2177	0.10	-1.1
2,257,320	-	natD	Synpcc7942_2177	0.20	+0.7
2,257,339	+	natD	Synpcc7942_2177	0.22	+0.4
2,257,347	-	natD	Synpcc7942_2177	0.23	+2.7
2,257,351	+	natD	Synpcc7942_2177	0.23	-0.3
2,257,351	+	natD	Synpcc7942_2177	0.23	+1.7
2,257,359	-	natD	Synpcc7942_2177	0.24	+1.3
2,257,359	-	natD	Synpcc7942_2177	0.24	-0.1
2,257,359	-	natD	Synpcc7942_2177	0.24	-0.1
2,257,420	+				-0.1
2,257,424	-	natD	Synpcc7942_2177	0.32	-1.1
2,257,474	+	natD	Synpcc7942_2177	0.37	-1.5
2,257,474	+	natD	Synpcc7942_2177	0.37	-1.2
2,257,474	+	natD	Synpcc7942_2177	0.37	+1.2
2,257,482	-	natD	Synpcc7942_2177	0.38	+1.9
2,257,560	+	natD	Synpcc7942_2177	0.47	+1.5
2,257,560	+	natD	Synpcc7942_2177	0.47	-0.1
2,257,561	+	natD	Synpcc7942_2177	0.47	+0.5
2,257,610	+	natD	Synpcc7942_2177	0.52	+0.3
2,257,640	+	natD	Synpcc7942_2177	0.56	+2.3
2,257,663	-	natD	Synpcc7942_2177	0.58	+0.4
2,257,663	-	natD	Synpcc7942_2177	0.58	+0.0
2,257,667	+	natD	Synpcc7942_2177	0.59	+0.9
2,257,667	+	natD	Synpcc7942_2177	0.59	+2.3
2,257,702	+	natD	Synpcc7942_2177	0.63	+0.2
2,257,710	-	natD	Synpcc7942_2177	0.64	+1.1
2,257,712	+	natD	Synpcc7942_2177	0.64	-0.1
2,257,712	+	natD	Synpcc7942_2177	0.64	+0.7
2,257,712	+	natD	Synpcc7942_2177	0.64	+1.2
2,257,712	+	natD	Synpcc7942_2177	0.64	-1.1
2,257,712	+	natD	Synpcc7942_2177	0.64	+0.5
2,257,712	+	natD	Synpcc7942_2177	0.64	+0.2
2,257,712	+	natD	Synpcc7942_2177	0.64	-1.1
2,257,712	+	natD	Synpcc7942_2177	0.64	-0.9
2,257,712	+	natD	Synpcc7942_2177	0.64	-0.4
2,257,720	-	natD	Synpcc7942_2177	0.65	-1.3
2,257,720	-	natD	Synpcc7942_2177	0.65	-1.1
2,257,720	-	natD	Synpcc7942_2177	0.65	+0.4
2,257,720	-	natD	Synpcc7942_2177	0.65	-0.5
2,257,720	-	natD	Synpcc7942_2177	0.65	+1.4
2,257,735	+	natD	Synpcc7942_2177	0.66	+2.5
2,257,768	+	natD	Synpcc7942_2177	0.70	-0.2
2,257,768	+	natD	Synpcc7942_2177	0.70	-0.6
2,257,798	-	natD	Synpcc7942_2177	0.74	+0.5
2,257,873	+	natD	Synpcc7942_2177	0.82	-0.1
2,257,880	-	natD	Synpcc7942_2177	0.83	+2.0
2,257,883	+	natD	Synpcc7942_2177	0.83	-0.2
2,257,883	+	natD	Synpcc7942_2177	0.83	-1.1
2,257,891	-	natD	Synpcc7942_2177	0.84	-0.1
2,257,891	-	natD	Synpcc7942_2177	0.84	+1.9
2,257,895	+	natD	Synpcc7942_2177	0.84	-0.4
2,257,931	+	natD	Synpcc7942_2177	0.88	+0.7
2,258,016	+				+0.6
2,258,019	-				-0.4
2,258,111	-		Synpcc7942_2178	0.17	-0.6
2,258,119	-		Synpcc7942_2178	0.19	+0.1
2,258,179	+		Synpcc7942_2178	0.37	+0.5
2,258,191	-		Synpcc7942_2178	0.40	+0.5
2,258,206	+		Synpcc7942_2178	0.44	+0.7
2,258,221	-		Synpcc7942_2178	0.49	-0.1
2,258,268	-		Synpcc7942_2178	0.63	+0.7
2,258,282	+		Synpcc7942_2178	0.67	+0.9
2,258,282	+		Synpcc7942_2178	0.67	+0.2
2,258,285	-		Synpcc7942_2178	0.68	-1.9
2,258,336	-		Synpcc7942_2178	0.82	-0.6
2,258,410	+				+1.9
2,258,425	-				-1.6
2,258,450	+				-1.1
2,258,450	+				-0.1
2,258,452	+				-0.4
2,258,458	-				-1.1
2,258,460	-				-0.1
2,258,460	-				+1.1
2,258,462	+				-0.4
2,258,511	+				-0.1
2,258,522	+				-0.1
2,258,522	+				-0.9
2,258,537	-		Synpcc7942_2179	0.10	-0.5
2,258,538	-		Synpcc7942_2179	0.10	-0.1
2,258,579	+		Synpcc7942_2179	0.15	-1.7
2,258,599	-		Synpcc7942_2179	0.17	-0.1
2,258,601	+		Synpcc7942_2179	0.17	+2.5
2,258,623	+		Synpcc7942_2179	0.19	-0.2
2,258,631	-		Synpcc7942_2179	0.20	+0.2
2,258,638	-		Synpcc7942_2179	0.21	-0.9
2,258,657	+		Synpcc7942_2179	0.23	+1.1
2,258,705	+		Synpcc7942_2179	0.28	-1.0
2,258,744	-		Synpcc7942_2179	0.33	-1.1
2,258,793	-		Synpcc7942_2179	0.38	+0.4
2,258,793	-		Synpcc7942_2179	0.38	+0.1
2,258,874	+		Synpcc7942_2179	0.47	-0.6
2,258,874	+		Synpcc7942_2179	0.47	+0.3
2,258,874	+		Synpcc7942_2179	0.47	-0.1
2,258,874	+		Synpcc7942_2179	0.47	-0.9
2,258,882	-		Synpcc7942_2179	0.48	+0.0
2,258,882	-		Synpcc7942_2179	0.48	+1.1
2,258,882	-		Synpcc7942_2179	0.48	-0.2
2,258,884	+		Synpcc7942_2179	0.48	+0.8
2,258,887	-		Synpcc7942_2179	0.48	+0.2
2,258,892	-		Synpcc7942_2179	0.49	+0.9
2,258,892	-		Synpcc7942_2179	0.49	+0.7
2,258,907	+		Synpcc7942_2179	0.50	+0.3
2,258,908	+		Synpcc7942_2179	0.51	+0.1
2,258,908	+		Synpcc7942_2179	0.51	-1.8
2,258,915	-		Synpcc7942_2179	0.51	+0.9
2,258,916	-		Synpcc7942_2179	0.51	+2.2
2,258,968	+		Synpcc7942_2179	0.57	-0.3
2,258,982	-		Synpcc7942_2179	0.59	-2.7
2,258,997	+		Synpcc7942_2179	0.60	-1.9
2,259,005	-		Synpcc7942_2179	0.61	-1.1
2,259,009	+		Synpcc7942_2179	0.62	-0.3
2,259,009	+		Synpcc7942_2179	0.62	+0.9
2,259,009	+		Synpcc7942_2179	0.62	+0.7