Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2171

Experiment: D-Cycloserine 0.015625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.015625 mg/ml
2,251,199	-		Synpcc7942_2169	0.12	-0.6
2,251,204	-		Synpcc7942_2169	0.14	+1.7
2,251,206	+		Synpcc7942_2169	0.14	-2.2
2,251,235	+		Synpcc7942_2169	0.23	+0.5
2,251,235	+		Synpcc7942_2169	0.23	+0.5
2,251,235	+		Synpcc7942_2169	0.23	-1.4
2,251,236	-		Synpcc7942_2169	0.23	-0.6
2,251,240	+		Synpcc7942_2169	0.25	+0.1
2,251,240	+		Synpcc7942_2169	0.25	+2.8
2,251,240	+		Synpcc7942_2169	0.25	+1.0
2,251,240	+		Synpcc7942_2169	0.25	-0.3
2,251,245	+		Synpcc7942_2169	0.26	+0.3
2,251,248	-		Synpcc7942_2169	0.27	+0.5
2,251,248	-		Synpcc7942_2169	0.27	-0.2
2,251,248	-		Synpcc7942_2169	0.27	+1.7
2,251,248	-		Synpcc7942_2169	0.27	+0.2
2,251,248	-		Synpcc7942_2169	0.27	+2.1
2,251,248	-		Synpcc7942_2169	0.27	-0.1
2,251,248	-		Synpcc7942_2169	0.27	-0.4
2,251,255	-		Synpcc7942_2169	0.29	+0.1
2,251,255	-		Synpcc7942_2169	0.29	-1.4
2,251,264	+		Synpcc7942_2169	0.32	-0.1
2,251,269	+		Synpcc7942_2169	0.34	-1.6
2,251,269	+		Synpcc7942_2169	0.34	-0.4
2,251,272	-		Synpcc7942_2169	0.35	-0.1
2,251,272	-		Synpcc7942_2169	0.35	+0.6
2,251,312	-		Synpcc7942_2169	0.47	-0.1
2,251,314	+		Synpcc7942_2169	0.48	+1.3
2,251,315	-		Synpcc7942_2169	0.48	-0.2
2,251,322	-		Synpcc7942_2169	0.50	-2.1
2,251,325	+		Synpcc7942_2169	0.51	-0.4
2,251,325	+		Synpcc7942_2169	0.51	+1.5
2,251,325	+		Synpcc7942_2169	0.51	+1.4
2,251,327	-		Synpcc7942_2169	0.52	+1.4
2,251,333	-		Synpcc7942_2169	0.53	-0.3
2,251,333	-		Synpcc7942_2169	0.53	-0.1
2,251,333	-		Synpcc7942_2169	0.53	+2.1
2,251,333	-		Synpcc7942_2169	0.53	+0.2
2,251,346	+		Synpcc7942_2169	0.57	+1.2
2,251,385	+		Synpcc7942_2169	0.69	+1.3
2,251,385	+		Synpcc7942_2169	0.69	-0.2
2,251,393	-		Synpcc7942_2169	0.72	+0.5
2,251,393	-		Synpcc7942_2169	0.72	-0.1
2,251,403	+		Synpcc7942_2169	0.75	-0.1
2,251,412	-		Synpcc7942_2169	0.78	-0.1
2,251,490	-				+0.6
2,251,554	-				-0.1
2,251,580	-				-0.5
2,251,580	-				+1.9
2,251,589	+				+0.7
2,251,596	+	fur2	Synpcc7942_2170	0.11	-0.1
2,251,596	+	fur2	Synpcc7942_2170	0.11	+0.7
2,251,596	+	fur2	Synpcc7942_2170	0.11	-0.5
2,251,596	+	fur2	Synpcc7942_2170	0.11	-0.6
2,251,601	+	fur2	Synpcc7942_2170	0.12	+0.3
2,251,602	-	fur2	Synpcc7942_2170	0.12	-0.1
2,251,604	-	fur2	Synpcc7942_2170	0.12	+0.4
2,251,604	-	fur2	Synpcc7942_2170	0.12	-2.4
2,251,604	-	fur2	Synpcc7942_2170	0.12	-0.5
2,251,619	-	fur2	Synpcc7942_2170	0.16	+0.9
2,251,634	+	fur2	Synpcc7942_2170	0.19	+1.5
2,251,664	+	fur2	Synpcc7942_2170	0.26	+1.6
2,251,664	+	fur2	Synpcc7942_2170	0.26	+0.4
2,251,664	+	fur2	Synpcc7942_2170	0.26	-0.4
2,251,664	+	fur2	Synpcc7942_2170	0.26	-0.3
2,251,664	+	fur2	Synpcc7942_2170	0.26	+0.5
2,251,664	+	fur2	Synpcc7942_2170	0.26	-1.0
2,251,664	+	fur2	Synpcc7942_2170	0.26	-2.4
2,251,664	+	fur2	Synpcc7942_2170	0.26	-1.6
2,251,664	+	fur2	Synpcc7942_2170	0.26	+1.1
2,251,664	+	fur2	Synpcc7942_2170	0.26	-1.2
2,251,664	+	fur2	Synpcc7942_2170	0.26	+0.4
2,251,668	-	fur2	Synpcc7942_2170	0.27	+0.3
2,251,672	-	fur2	Synpcc7942_2170	0.28	-0.5
2,251,672	-	fur2	Synpcc7942_2170	0.28	+0.3
2,251,672	-	fur2	Synpcc7942_2170	0.28	+1.3
2,251,672	-	fur2	Synpcc7942_2170	0.28	-0.6
2,251,672	-	fur2	Synpcc7942_2170	0.28	-1.6
2,251,672	-	fur2	Synpcc7942_2170	0.28	-0.5
2,251,672	-	fur2	Synpcc7942_2170	0.28	+0.5
2,251,672	-	fur2	Synpcc7942_2170	0.28	+0.5
2,251,672	-	fur2	Synpcc7942_2170	0.28	-2.1
2,251,687	+	fur2	Synpcc7942_2170	0.31	-0.5
2,251,724	-	fur2	Synpcc7942_2170	0.39	-0.7
2,251,730	+	fur2	Synpcc7942_2170	0.40	+1.9
2,251,743	+	fur2	Synpcc7942_2170	0.43	+0.0
2,251,751	-	fur2	Synpcc7942_2170	0.45	-2.4
2,251,751	-	fur2	Synpcc7942_2170	0.45	+0.3
2,251,755	+	fur2	Synpcc7942_2170	0.46	+0.5
2,251,757	+	fur2	Synpcc7942_2170	0.46	+0.2
2,251,761	-	fur2	Synpcc7942_2170	0.47	+0.3
2,251,763	-	fur2	Synpcc7942_2170	0.48	-0.6
2,251,766	+	fur2	Synpcc7942_2170	0.48	+1.7
2,251,771	-	fur2	Synpcc7942_2170	0.50	-0.3
2,251,774	-	fur2	Synpcc7942_2170	0.50	+1.4
2,251,774	-	fur2	Synpcc7942_2170	0.50	-0.7
2,251,774	-	fur2	Synpcc7942_2170	0.50	-0.3
2,251,789	+	fur2	Synpcc7942_2170	0.54	-0.9
2,251,789	+	fur2	Synpcc7942_2170	0.54	-0.4
2,251,794	+	fur2	Synpcc7942_2170	0.55	-1.1
2,251,794	+	fur2	Synpcc7942_2170	0.55	-0.5
2,251,794	+	fur2	Synpcc7942_2170	0.55	+0.4
2,251,794	+	fur2	Synpcc7942_2170	0.55	-0.2
2,251,794	+	fur2	Synpcc7942_2170	0.55	-1.5
2,251,794	+	fur2	Synpcc7942_2170	0.55	-0.1
2,251,794	+	fur2	Synpcc7942_2170	0.55	-0.6
2,251,794	+	fur2	Synpcc7942_2170	0.55	-0.1
2,251,794	+	fur2	Synpcc7942_2170	0.55	+0.4
2,251,794	+	fur2	Synpcc7942_2170	0.55	-0.5
2,251,794	+	fur2	Synpcc7942_2170	0.55	-2.5
2,251,795	+	fur2	Synpcc7942_2170	0.55	+0.9
2,251,795	+	fur2	Synpcc7942_2170	0.55	+0.7
2,251,795	+	fur2	Synpcc7942_2170	0.55	+0.7
2,251,797	-	fur2	Synpcc7942_2170	0.55	-1.1
2,251,797	-	fur2	Synpcc7942_2170	0.55	+0.4
2,251,797	-	fur2	Synpcc7942_2170	0.55	+0.2
2,251,801	+	fur2	Synpcc7942_2170	0.56	+0.1
2,251,801	+	fur2	Synpcc7942_2170	0.56	+0.4
2,251,802	-	fur2	Synpcc7942_2170	0.56	-0.5
2,251,802	-	fur2	Synpcc7942_2170	0.56	-0.6
2,251,802	-	fur2	Synpcc7942_2170	0.56	+2.3
2,251,802	-	fur2	Synpcc7942_2170	0.56	+0.5
2,251,802	-	fur2	Synpcc7942_2170	0.56	+2.3
2,251,809	-	fur2	Synpcc7942_2170	0.58	-1.6
2,251,837	+	fur2	Synpcc7942_2170	0.64	-1.1
2,251,837	+	fur2	Synpcc7942_2170	0.64	-2.6
2,251,844	+	fur2	Synpcc7942_2170	0.66	-0.1
2,251,845	-	fur2	Synpcc7942_2170	0.66	-1.1
2,251,847	-	fur2	Synpcc7942_2170	0.66	+0.5
2,251,848	+	fur2	Synpcc7942_2170	0.67	-1.2
2,251,848	+	fur2	Synpcc7942_2170	0.67	-0.1
2,251,848	+	fur2	Synpcc7942_2170	0.67	+0.0
2,251,852	-	fur2	Synpcc7942_2170	0.68	+1.1
2,251,855	+	fur2	Synpcc7942_2170	0.68	+0.6
2,251,856	-	fur2	Synpcc7942_2170	0.68	+1.3
2,251,856	-	fur2	Synpcc7942_2170	0.68	+1.4
2,251,856	-	fur2	Synpcc7942_2170	0.68	+1.5
2,251,906	+	fur2	Synpcc7942_2170	0.80	-1.9
2,251,937	-	fur2	Synpcc7942_2170	0.86	-0.7
2,251,952	-	fur2	Synpcc7942_2170	0.90	-2.1
2,251,959	-				-1.1
2,251,990	+				-0.5
2,252,021	-				-0.1
2,252,106	+				-1.1
2,252,111	+				-3.6
2,252,203	+				-2.0
2,252,222	-				+0.4
2,252,340	+	dpsA	Synpcc7942_2171	0.27	-1.5
2,252,359	+	dpsA	Synpcc7942_2171	0.31	+1.9
2,252,391	+	dpsA	Synpcc7942_2171	0.37	-2.1
2,252,399	-	dpsA	Synpcc7942_2171	0.38	-0.6
2,252,424	+	dpsA	Synpcc7942_2171	0.43	-0.3
2,252,524	-	dpsA	Synpcc7942_2171	0.62	-1.2
2,252,614	-	dpsA	Synpcc7942_2171	0.79	+0.8
2,252,614	-	dpsA	Synpcc7942_2171	0.79	-2.4
2,252,628	+	dpsA	Synpcc7942_2171	0.81	-2.4
2,252,668	-	dpsA	Synpcc7942_2171	0.89	-2.4
2,252,796	-				-1.1
2,252,951	+				-0.1
2,252,951	+				-1.1
2,252,951	+				-1.3
2,252,958	+				-2.9
2,252,959	-				-1.1
2,252,959	-				-1.9
2,252,986	+				-1.1
2,253,048	+		Synpcc7942_2172	0.33	-3.5
2,253,059	+		Synpcc7942_2172	0.38	+0.5
2,253,119	+		Synpcc7942_2172	0.61	+1.5
2,253,127	-		Synpcc7942_2172	0.64	-1.1
2,253,181	+		Synpcc7942_2172	0.84	+0.4
2,253,234	+				-2.2
2,253,242	-				-0.6
2,253,242	-				-3.1
2,253,247	-				-2.4
2,253,312	-	idiC	Synpcc7942_2173	0.17	-0.3
2,253,319	+	idiC	Synpcc7942_2173	0.18	+1.2
2,253,334	-	idiC	Synpcc7942_2173	0.21	+0.1
2,253,353	+	idiC	Synpcc7942_2173	0.24	-0.6
2,253,355	-	idiC	Synpcc7942_2173	0.24	+0.5
2,253,394	-	idiC	Synpcc7942_2173	0.31	-1.6
2,253,420	+	idiC	Synpcc7942_2173	0.36	-1.5
2,253,420	+	idiC	Synpcc7942_2173	0.36	-1.6
2,253,447	-	idiC	Synpcc7942_2173	0.41	-1.1
2,253,482	+	idiC	Synpcc7942_2173	0.47	-2.2
2,253,492	+	idiC	Synpcc7942_2173	0.49	-2.6
2,253,604	+	idiC	Synpcc7942_2173	0.69	+2.1
2,253,654	-	idiC	Synpcc7942_2173	0.78	+0.9
2,253,673	-	idiC	Synpcc7942_2173	0.81	-0.4
2,253,683	-	idiC	Synpcc7942_2173	0.83	-0.6
2,253,700	-	idiC	Synpcc7942_2173	0.86	-0.2