Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2071

Experiment: D-Cycloserine 0.015625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.015625 mg/ml
2,146,598	+	pilT	Synpcc7942_2070	0.21	-0.1
2,146,759	+	pilT	Synpcc7942_2070	0.36	+0.6
2,146,762	+	pilT	Synpcc7942_2070	0.36	-0.2
2,146,770	-	pilT	Synpcc7942_2070	0.37	-0.1
2,146,900	-	pilT	Synpcc7942_2070	0.49	-1.4
2,146,906	-	pilT	Synpcc7942_2070	0.50	-0.1
2,146,910	+	pilT	Synpcc7942_2070	0.50	+6.6
2,146,910	+	pilT	Synpcc7942_2070	0.50	-0.9
2,146,925	-	pilT	Synpcc7942_2070	0.51	-0.7
2,146,992	-	pilT	Synpcc7942_2070	0.57	+0.2
2,147,003	+	pilT	Synpcc7942_2070	0.58	-0.6
2,147,051	+	pilT	Synpcc7942_2070	0.63	-0.4
2,147,059	-	pilT	Synpcc7942_2070	0.64	-0.8
2,147,069	-	pilT	Synpcc7942_2070	0.65	-0.1
2,147,079	-	pilT	Synpcc7942_2070	0.65	-1.8
2,147,136	-	pilT	Synpcc7942_2070	0.71	-1.7
2,147,142	-	pilT	Synpcc7942_2070	0.71	+2.7
2,147,189	+	pilT	Synpcc7942_2070	0.76	+2.5
2,147,204	-	pilT	Synpcc7942_2070	0.77	-0.1
2,147,224	-	pilT	Synpcc7942_2070	0.79	-0.1
2,147,237	-	pilT	Synpcc7942_2070	0.80	+0.5
2,147,246	+	pilT	Synpcc7942_2070	0.81	+0.7
2,147,254	-	pilT	Synpcc7942_2070	0.82	-1.6
2,147,254	-	pilT	Synpcc7942_2070	0.82	-2.7
2,147,254	-	pilT	Synpcc7942_2070	0.82	-1.4
2,147,313	+	pilT	Synpcc7942_2070	0.87	-0.7
2,147,321	-	pilT	Synpcc7942_2070	0.88	-2.1
2,147,328	+	pilT	Synpcc7942_2070	0.88	-2.1
2,147,392	-				-0.5
2,147,443	+				+0.7
2,147,462	+				-0.6
2,147,470	-				+0.4
2,147,514	+				-0.1
2,147,550	+				-3.0
2,147,556	+				-2.4
2,147,568	+				-1.5
2,147,608	+				-1.6
2,147,608	+				-1.7
2,147,611	-				-2.6
2,147,611	-				-2.7
2,147,611	-				-1.7
2,147,613	+				-2.7
2,147,616	-				-2.9
2,147,616	-				-2.2
2,147,616	-				-5.9
2,147,625	+				-3.5
2,147,661	-				-3.4
2,147,677	+				-1.5
2,147,682	+				-1.9
2,147,685	-				-2.4
2,147,685	-				-3.1
2,147,685	-				-2.4
2,147,693	+				-3.1
2,147,702	+				-1.6
2,147,702	+				-1.9
2,147,715	+				-2.4
2,147,715	-				-1.4
2,147,717	+				-1.7
2,147,723	+				-3.4
2,147,723	-				-1.7
2,147,723	-				-2.7
2,147,725	-	pilB1	Synpcc7942_2071	0.10	-3.2
2,147,757	+	pilB1	Synpcc7942_2071	0.12	-1.1
2,147,779	+	pilB1	Synpcc7942_2071	0.13	-3.0
2,147,787	-	pilB1	Synpcc7942_2071	0.13	-2.2
2,147,806	-	pilB1	Synpcc7942_2071	0.14	-2.1
2,147,808	+	pilB1	Synpcc7942_2071	0.14	-2.4
2,147,816	-	pilB1	Synpcc7942_2071	0.15	-1.1
2,147,816	-	pilB1	Synpcc7942_2071	0.15	-0.3
2,147,823	+	pilB1	Synpcc7942_2071	0.15	-2.5
2,147,835	-	pilB1	Synpcc7942_2071	0.15	-2.7
2,147,846	+	pilB1	Synpcc7942_2071	0.16	-2.1
2,147,846	+	pilB1	Synpcc7942_2071	0.16	-2.7
2,147,859	-	pilB1	Synpcc7942_2071	0.17	-2.8
2,147,871	+	pilB1	Synpcc7942_2071	0.17	-3.5
2,147,871	+	pilB1	Synpcc7942_2071	0.17	-2.1
2,147,877	+	pilB1	Synpcc7942_2071	0.18	-1.1
2,147,879	-	pilB1	Synpcc7942_2071	0.18	-2.1
2,147,879	-	pilB1	Synpcc7942_2071	0.18	-2.7
2,147,894	+	pilB1	Synpcc7942_2071	0.18	-2.9
2,147,902	-	pilB1	Synpcc7942_2071	0.19	-2.0
2,147,930	-	pilB1	Synpcc7942_2071	0.20	-0.1
2,147,930	-	pilB1	Synpcc7942_2071	0.20	-1.9
2,147,959	-	pilB1	Synpcc7942_2071	0.22	-2.7
2,147,968	+	pilB1	Synpcc7942_2071	0.22	-3.1
2,147,968	+	pilB1	Synpcc7942_2071	0.22	-1.7
2,147,968	+	pilB1	Synpcc7942_2071	0.22	-2.5
2,147,968	+	pilB1	Synpcc7942_2071	0.22	-0.5
2,147,976	-	pilB1	Synpcc7942_2071	0.23	-2.2
2,147,976	-	pilB1	Synpcc7942_2071	0.23	-1.3
2,147,986	-	pilB1	Synpcc7942_2071	0.23	-2.2
2,147,986	-	pilB1	Synpcc7942_2071	0.23	-0.5
2,147,994	-	pilB1	Synpcc7942_2071	0.23	-3.1
2,147,996	-	pilB1	Synpcc7942_2071	0.24	-2.7
2,148,002	+	pilB1	Synpcc7942_2071	0.24	+0.6
2,148,007	+	pilB1	Synpcc7942_2071	0.24	-3.4
2,148,015	-	pilB1	Synpcc7942_2071	0.24	-1.8
2,148,015	-	pilB1	Synpcc7942_2071	0.24	-1.7
2,148,029	-	pilB1	Synpcc7942_2071	0.25	-1.1
2,148,029	-	pilB1	Synpcc7942_2071	0.25	-2.3
2,148,062	-	pilB1	Synpcc7942_2071	0.27	-1.7
2,148,073	+	pilB1	Synpcc7942_2071	0.27	-1.3
2,148,076	-	pilB1	Synpcc7942_2071	0.28	-1.3
2,148,150	-	pilB1	Synpcc7942_2071	0.31	-1.4
2,148,160	-	pilB1	Synpcc7942_2071	0.32	-2.9
2,148,164	+	pilB1	Synpcc7942_2071	0.32	-2.2
2,148,164	+	pilB1	Synpcc7942_2071	0.32	-2.6
2,148,172	-	pilB1	Synpcc7942_2071	0.32	-1.1
2,148,223	+	pilB1	Synpcc7942_2071	0.35	-1.4
2,148,251	+	pilB1	Synpcc7942_2071	0.36	-2.0
2,148,298	+	pilB1	Synpcc7942_2071	0.39	-1.1
2,148,310	+	pilB1	Synpcc7942_2071	0.39	-1.4
2,148,318	-	pilB1	Synpcc7942_2071	0.40	-3.0
2,148,322	-	pilB1	Synpcc7942_2071	0.40	-2.0
2,148,334	-	pilB1	Synpcc7942_2071	0.40	-1.5
2,148,345	+	pilB1	Synpcc7942_2071	0.41	-3.4
2,148,369	-	pilB1	Synpcc7942_2071	0.42	-1.7
2,148,397	-	pilB1	Synpcc7942_2071	0.44	-3.1
2,148,434	+	pilB1	Synpcc7942_2071	0.45	-3.5
2,148,441	+	pilB1	Synpcc7942_2071	0.46	-1.9
2,148,449	-	pilB1	Synpcc7942_2071	0.46	-1.4
2,148,450	+	pilB1	Synpcc7942_2071	0.46	+0.2
2,148,492	+	pilB1	Synpcc7942_2071	0.48	-2.2
2,148,510	-	pilB1	Synpcc7942_2071	0.49	-1.9
2,148,510	-	pilB1	Synpcc7942_2071	0.49	-1.2
2,148,510	-	pilB1	Synpcc7942_2071	0.49	-0.6
2,148,511	-	pilB1	Synpcc7942_2071	0.49	-2.1
2,148,543	+	pilB1	Synpcc7942_2071	0.51	-3.0
2,148,552	-	pilB1	Synpcc7942_2071	0.51	-1.7
2,148,564	+	pilB1	Synpcc7942_2071	0.52	-2.2
2,148,646	+	pilB1	Synpcc7942_2071	0.56	-2.2
2,148,651	+	pilB1	Synpcc7942_2071	0.56	-2.8
2,148,680	-	pilB1	Synpcc7942_2071	0.58	-3.2
2,148,686	+	pilB1	Synpcc7942_2071	0.58	-4.5
2,148,694	-	pilB1	Synpcc7942_2071	0.58	-1.9
2,148,738	+	pilB1	Synpcc7942_2071	0.61	-1.9
2,148,739	+	pilB1	Synpcc7942_2071	0.61	-2.5
2,148,746	-	pilB1	Synpcc7942_2071	0.61	-0.1
2,148,760	+	pilB1	Synpcc7942_2071	0.62	-5.1
2,148,768	-	pilB1	Synpcc7942_2071	0.62	-3.5
2,148,773	+	pilB1	Synpcc7942_2071	0.62	-2.8
2,148,810	+				-1.1
2,148,866	-	pilB1	Synpcc7942_2071	0.67	-3.0
2,148,866	-	pilB1	Synpcc7942_2071	0.67	-1.7
2,148,868	+	pilB1	Synpcc7942_2071	0.67	-2.9
2,148,869	+	pilB1	Synpcc7942_2071	0.67	-3.8
2,148,916	+	pilB1	Synpcc7942_2071	0.70	-2.9
2,148,962	+	pilB1	Synpcc7942_2071	0.72	-2.6
2,148,962	+	pilB1	Synpcc7942_2071	0.72	-2.1
2,148,972	-	pilB1	Synpcc7942_2071	0.72	-2.4
2,149,033	+	pilB1	Synpcc7942_2071	0.75	-2.3
2,149,052	+	pilB1	Synpcc7942_2071	0.76	-2.0
2,149,054	+	pilB1	Synpcc7942_2071	0.76	-3.3
2,149,054	+	pilB1	Synpcc7942_2071	0.76	-2.5
2,149,054	+	pilB1	Synpcc7942_2071	0.76	-2.0
2,149,055	+	pilB1	Synpcc7942_2071	0.76	-2.8
2,149,057	+	pilB1	Synpcc7942_2071	0.77	-3.1
2,149,061	+	pilB1	Synpcc7942_2071	0.77	-1.7
2,149,062	+	pilB1	Synpcc7942_2071	0.77	-2.6
2,149,062	+	pilB1	Synpcc7942_2071	0.77	-2.6
2,149,062	+	pilB1	Synpcc7942_2071	0.77	-2.7
2,149,062	+	pilB1	Synpcc7942_2071	0.77	-2.2
2,149,062	+	pilB1	Synpcc7942_2071	0.77	-3.1
2,149,062	-	pilB1	Synpcc7942_2071	0.77	-1.9
2,149,062	-	pilB1	Synpcc7942_2071	0.77	-1.5
2,149,062	-	pilB1	Synpcc7942_2071	0.77	-2.1
2,149,065	-	pilB1	Synpcc7942_2071	0.77	-2.1
2,149,070	-	pilB1	Synpcc7942_2071	0.77	-3.3
2,149,070	-	pilB1	Synpcc7942_2071	0.77	-1.5
2,149,070	-	pilB1	Synpcc7942_2071	0.77	-2.4
2,149,110	+	pilB1	Synpcc7942_2071	0.79	-1.3
2,149,112	-	pilB1	Synpcc7942_2071	0.79	-4.6
2,149,140	-	pilB1	Synpcc7942_2071	0.81	-2.8
2,149,153	+	pilB1	Synpcc7942_2071	0.81	-1.3
2,149,202	-	pilB1	Synpcc7942_2071	0.84	-0.1
2,149,204	+	pilB1	Synpcc7942_2071	0.84	-2.1
2,149,229	+	pilB1	Synpcc7942_2071	0.85	-0.8
2,149,230	-	pilB1	Synpcc7942_2071	0.85	-2.7
2,149,230	-	pilB1	Synpcc7942_2071	0.85	-2.7
2,149,235	-	pilB1	Synpcc7942_2071	0.85	-1.5
2,149,237	+	pilB1	Synpcc7942_2071	0.86	-2.4
2,149,245	-	pilB1	Synpcc7942_2071	0.86	-1.9
2,149,245	-	pilB1	Synpcc7942_2071	0.86	-2.5
2,149,245	-	pilB1	Synpcc7942_2071	0.86	-3.1
2,149,250	+	pilB1	Synpcc7942_2071	0.86	-2.1
2,149,250	+	pilB1	Synpcc7942_2071	0.86	-2.9
2,149,252	-	pilB1	Synpcc7942_2071	0.86	-2.4
2,149,252	-	pilB1	Synpcc7942_2071	0.86	-2.7
2,149,255	+	pilB1	Synpcc7942_2071	0.86	-2.8
2,149,258	-	pilB1	Synpcc7942_2071	0.87	-1.1
2,149,258	-	pilB1	Synpcc7942_2071	0.87	-4.5
2,149,258	-	pilB1	Synpcc7942_2071	0.87	-1.9
2,149,260	+	pilB1	Synpcc7942_2071	0.87	-3.4
2,149,268	-	pilB1	Synpcc7942_2071	0.87	-2.5
2,149,268	-	pilB1	Synpcc7942_2071	0.87	-2.0
2,149,278	-	pilB1	Synpcc7942_2071	0.88	-3.1
2,149,278	-	pilB1	Synpcc7942_2071	0.88	-1.7
2,149,281	-	pilB1	Synpcc7942_2071	0.88	-1.7
2,149,338	+				-2.4
2,149,343	+				-4.2
2,149,343	+				-0.8
2,149,356	-				+0.2
2,149,382	-				-2.8
2,149,408	+				-0.1
2,149,412	+				-2.7
2,149,413	+				-2.2
2,149,421	-				-1.1
2,149,492	+				-2.4
2,149,525	-				-2.4
2,149,526	+				+0.4
2,149,529	-				-2.4
2,149,534	-				-3.5
2,149,574	+				-2.4
2,149,577	-				-1.7
2,149,577	-				-2.4
2,149,582	-				-1.9
2,149,582	-				-1.1
2,149,611	+				-3.3
2,149,615	+				-0.2
2,149,629	-				-1.1
2,149,631	-				-1.7
2,149,654	-				-1.1
2,149,654	-				+0.2
2,149,702	+				+1.2
2,149,722	-				-0.3
2,150,401	+				-0.1
2,150,437	-				+1.3
2,150,437	-				-1.1
2,150,446	+				-1.1
2,150,446	+				+1.7
2,150,454	-				-0.1
2,150,454	-				-3.1
2,150,454	-				-1.8
2,150,456	+				+0.6
2,150,458	+				-2.4
2,150,483	-				-0.1
2,150,489	+				-0.7