Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2069

Experiment: D-Cycloserine 0.015625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.015625 mg/ml
2,144,132	+		Synpcc7942_2067	0.64	+0.9
2,144,164	+		Synpcc7942_2067	0.66	-2.7
2,144,171	+		Synpcc7942_2067	0.67	+0.5
2,144,172	-		Synpcc7942_2067	0.67	+1.1
2,144,208	-		Synpcc7942_2067	0.70	+0.7
2,144,223	+		Synpcc7942_2067	0.71	+0.1
2,144,244	-		Synpcc7942_2067	0.73	-0.3
2,144,257	-		Synpcc7942_2067	0.74	+0.9
2,144,260	+		Synpcc7942_2067	0.74	+0.4
2,144,316	-		Synpcc7942_2067	0.78	+0.2
2,144,323	-		Synpcc7942_2067	0.79	+0.7
2,144,326	-		Synpcc7942_2067	0.79	+0.5
2,144,402	+		Synpcc7942_2067	0.85	-2.1
2,144,402	+		Synpcc7942_2067	0.85	+0.5
2,144,413	+		Synpcc7942_2067	0.86	+0.6
2,144,421	-		Synpcc7942_2067	0.87	+1.3
2,144,435	+		Synpcc7942_2067	0.88	-0.0
2,144,453	-		Synpcc7942_2067	0.89	-0.5
2,144,455	-		Synpcc7942_2067	0.90	-0.4
2,144,462	-				+0.5
2,144,473	+				+0.5
2,144,523	-				+0.0
2,144,555	+				+0.4
2,144,570	-				-0.1
2,144,577	-				+0.4
2,144,584	+				-1.1
2,144,584	+				+0.4
2,144,592	-				+0.6
2,144,604	-				+1.2
2,144,616	+				+1.5
2,144,621	+		Synpcc7942_2068	0.13	-0.2
2,144,627	-		Synpcc7942_2068	0.14	+2.1
2,144,629	-		Synpcc7942_2068	0.14	+0.2
2,144,629	-		Synpcc7942_2068	0.14	+0.4
2,144,629	-		Synpcc7942_2068	0.14	-0.6
2,144,641	+		Synpcc7942_2068	0.17	-0.2
2,144,666	+		Synpcc7942_2068	0.21	-0.3
2,144,704	-		Synpcc7942_2068	0.28	-0.8
2,144,728	-		Synpcc7942_2068	0.32	+0.4
2,144,729	-		Synpcc7942_2068	0.32	+0.2
2,144,741	-		Synpcc7942_2068	0.35	-1.9
2,144,743	+		Synpcc7942_2068	0.35	+0.4
2,144,746	-				-0.1
2,144,748	+		Synpcc7942_2068	0.36	+0.3
2,144,751	-		Synpcc7942_2068	0.36	-1.7
2,144,753	+		Synpcc7942_2068	0.37	-0.6
2,144,756	-		Synpcc7942_2068	0.37	-1.7
2,144,761	-		Synpcc7942_2068	0.38	+1.1
2,144,767	-		Synpcc7942_2068	0.39	-1.1
2,144,782	+		Synpcc7942_2068	0.42	-2.1
2,144,859	-		Synpcc7942_2068	0.56	-1.5
2,144,897	+		Synpcc7942_2068	0.63	-0.1
2,144,907	-		Synpcc7942_2068	0.65	-0.9
2,144,929	+		Synpcc7942_2068	0.68	-1.9
2,144,940	+		Synpcc7942_2068	0.70	+0.3
2,144,968	-		Synpcc7942_2068	0.75	-0.1
2,144,974	-		Synpcc7942_2068	0.77	+1.5
2,144,999	+		Synpcc7942_2068	0.81	-0.9
2,144,999	+		Synpcc7942_2068	0.81	+0.1
2,145,007	+		Synpcc7942_2068	0.83	+1.9
2,145,007	+		Synpcc7942_2068	0.83	+1.0
2,145,012	+		Synpcc7942_2068	0.83	-0.8
2,145,012	+		Synpcc7942_2068	0.83	+0.9
2,145,012	+		Synpcc7942_2068	0.83	+0.3
2,145,015	-		Synpcc7942_2068	0.84	-1.1
2,145,069	+				+0.0
2,145,069	+				+0.5
2,145,077	-				+0.3
2,145,077	-				+1.3
2,145,088	+				+0.8
2,145,096	-				-0.0
2,145,101	-				-2.4
2,145,113	+				-2.6
2,145,113	+				-3.5
2,145,114	+				+0.6
2,145,121	-				-0.1
2,145,121	-				+1.7
2,145,192	-				-3.5
2,145,197	-				-2.9
2,145,347	+	pilC	Synpcc7942_2069	0.19	-1.1
2,145,357	+	pilC	Synpcc7942_2069	0.20	-3.5
2,145,357	+	pilC	Synpcc7942_2069	0.20	-2.2
2,145,375	-	pilC	Synpcc7942_2069	0.22	-1.4
2,145,380	+	pilC	Synpcc7942_2069	0.22	-1.5
2,145,380	+	pilC	Synpcc7942_2069	0.22	-1.4
2,145,390	-	pilC	Synpcc7942_2069	0.23	-2.1
2,145,391	+	pilC	Synpcc7942_2069	0.23	-2.4
2,145,461	+	pilC	Synpcc7942_2069	0.29	-3.1
2,145,461	+	pilC	Synpcc7942_2069	0.29	-2.6
2,145,469	-	pilC	Synpcc7942_2069	0.29	-2.4
2,145,482	+	pilC	Synpcc7942_2069	0.30	-0.5
2,145,492	+	pilC	Synpcc7942_2069	0.31	-2.2
2,145,561	+	pilC	Synpcc7942_2069	0.37	-2.3
2,145,561	+	pilC	Synpcc7942_2069	0.37	-3.4
2,145,561	+	pilC	Synpcc7942_2069	0.37	-1.5
2,145,569	-	pilC	Synpcc7942_2069	0.37	-2.5
2,145,575	+	pilC	Synpcc7942_2069	0.38	-2.4
2,145,602	-	pilC	Synpcc7942_2069	0.40	-2.4
2,145,668	+	pilC	Synpcc7942_2069	0.45	-2.1
2,145,668	+	pilC	Synpcc7942_2069	0.45	-2.8
2,145,759	-	pilC	Synpcc7942_2069	0.53	-1.6
2,145,759	-	pilC	Synpcc7942_2069	0.53	-2.7
2,145,807	-	pilC	Synpcc7942_2069	0.57	-1.7
2,146,043	-	pilC	Synpcc7942_2069	0.76	-2.7
2,146,135	+	pilC	Synpcc7942_2069	0.83	-2.6
2,146,135	+	pilC	Synpcc7942_2069	0.83	-2.7
2,146,143	-	pilC	Synpcc7942_2069	0.84	-2.3
2,146,148	+	pilC	Synpcc7942_2069	0.84	-2.7
2,146,156	+	pilC	Synpcc7942_2069	0.85	-2.4
2,146,218	-				-3.4
2,146,318	+				-1.9
2,146,318	+				-2.7
2,146,336	-				-0.8
2,146,371	-				-2.4
2,146,380	+				+0.9
2,146,385	-				-0.9
2,146,598	+	pilT	Synpcc7942_2070	0.21	-0.1
2,146,759	+	pilT	Synpcc7942_2070	0.36	+0.6
2,146,762	+	pilT	Synpcc7942_2070	0.36	-0.2
2,146,770	-	pilT	Synpcc7942_2070	0.37	-0.1
2,146,900	-	pilT	Synpcc7942_2070	0.49	-1.4
2,146,906	-	pilT	Synpcc7942_2070	0.50	-0.1
2,146,910	+	pilT	Synpcc7942_2070	0.50	+6.6
2,146,910	+	pilT	Synpcc7942_2070	0.50	-0.9
2,146,925	-	pilT	Synpcc7942_2070	0.51	-0.7
2,146,992	-	pilT	Synpcc7942_2070	0.57	+0.2
2,147,003	+	pilT	Synpcc7942_2070	0.58	-0.6
2,147,051	+	pilT	Synpcc7942_2070	0.63	-0.4
2,147,059	-	pilT	Synpcc7942_2070	0.64	-0.8
2,147,069	-	pilT	Synpcc7942_2070	0.65	-0.1
2,147,079	-	pilT	Synpcc7942_2070	0.65	-1.8
2,147,136	-	pilT	Synpcc7942_2070	0.71	-1.7
2,147,142	-	pilT	Synpcc7942_2070	0.71	+2.7
2,147,189	+	pilT	Synpcc7942_2070	0.76	+2.5
2,147,204	-	pilT	Synpcc7942_2070	0.77	-0.1
2,147,224	-	pilT	Synpcc7942_2070	0.79	-0.1
2,147,237	-	pilT	Synpcc7942_2070	0.80	+0.5
2,147,246	+	pilT	Synpcc7942_2070	0.81	+0.7
2,147,254	-	pilT	Synpcc7942_2070	0.82	-1.6
2,147,254	-	pilT	Synpcc7942_2070	0.82	-2.7
2,147,254	-	pilT	Synpcc7942_2070	0.82	-1.4
2,147,313	+	pilT	Synpcc7942_2070	0.87	-0.7
2,147,321	-	pilT	Synpcc7942_2070	0.88	-2.1
2,147,328	+	pilT	Synpcc7942_2070	0.88	-2.1