Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1906

Experiment: D-Cycloserine 0.015625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.015625 mg/ml
1,981,582	+	hlyB	Synpcc7942_1905	0.69	+1.7
1,981,601	-	hlyB	Synpcc7942_1905	0.70	+1.9
1,981,601	-	hlyB	Synpcc7942_1905	0.70	+1.1
1,981,668	-	hlyB	Synpcc7942_1905	0.72	+0.3
1,981,693	+	hlyB	Synpcc7942_1905	0.73	+1.9
1,981,699	-	hlyB	Synpcc7942_1905	0.73	+0.5
1,981,707	-	hlyB	Synpcc7942_1905	0.74	+1.0
1,981,718	+	hlyB	Synpcc7942_1905	0.74	+1.8
1,981,742	-	hlyB	Synpcc7942_1905	0.75	+2.7
1,981,787	-	hlyB	Synpcc7942_1905	0.76	-1.7
1,981,813	-	hlyB	Synpcc7942_1905	0.77	+0.5
1,981,822	-	hlyB	Synpcc7942_1905	0.77	+0.7
1,981,849	-	hlyB	Synpcc7942_1905	0.78	+1.3
1,981,851	+				+0.5
1,981,854	-	hlyB	Synpcc7942_1905	0.79	-0.1
1,981,859	-	hlyB	Synpcc7942_1905	0.79	+0.4
1,981,875	+	hlyB	Synpcc7942_1905	0.79	+1.9
1,981,883	-	hlyB	Synpcc7942_1905	0.79	+0.7
1,981,883	-	hlyB	Synpcc7942_1905	0.79	-1.9
1,981,906	-	hlyB	Synpcc7942_1905	0.80	+1.5
1,981,932	+	hlyB	Synpcc7942_1905	0.81	-1.7
1,981,942	+	hlyB	Synpcc7942_1905	0.81	-1.7
1,981,963	+	hlyB	Synpcc7942_1905	0.82	+1.5
1,981,965	+	hlyB	Synpcc7942_1905	0.82	-0.3
1,981,973	-	hlyB	Synpcc7942_1905	0.82	-1.3
1,981,973	-	hlyB	Synpcc7942_1905	0.82	-0.4
1,982,018	-	hlyB	Synpcc7942_1905	0.84	+0.6
1,982,029	-	hlyB	Synpcc7942_1905	0.84	-1.5
1,982,031	+	hlyB	Synpcc7942_1905	0.84	+1.5
1,982,031	+	hlyB	Synpcc7942_1905	0.84	+0.6
1,982,031	+	hlyB	Synpcc7942_1905	0.84	-0.6
1,982,034	-	hlyB	Synpcc7942_1905	0.85	+2.3
1,982,039	-	hlyB	Synpcc7942_1905	0.85	+0.0
1,982,039	-	hlyB	Synpcc7942_1905	0.85	+1.9
1,982,039	-	hlyB	Synpcc7942_1905	0.85	-0.1
1,982,052	+	hlyB	Synpcc7942_1905	0.85	+0.4
1,982,052	+	hlyB	Synpcc7942_1905	0.85	-0.5
1,982,061	-	hlyB	Synpcc7942_1905	0.85	-0.1
1,982,066	-	hlyB	Synpcc7942_1905	0.86	+0.4
1,982,160	+				-0.1
1,982,174	+	hlyB	Synpcc7942_1905	0.89	-0.7
1,982,206	+				-1.1
1,982,214	-				+2.7
1,982,223	+				-0.3
1,982,250	-				+0.6
1,982,272	-				+0.4
1,982,278	-				-1.1
1,982,321	-				-0.5
1,982,340	-				+0.4
1,982,344	-				+1.0
1,982,354	+				-0.1
1,982,354	+				+0.2
1,982,362	-				-0.5
1,982,362	-				+1.2
1,982,362	-				+0.0
1,982,364	+				+0.7
1,982,372	-				+0.9
1,982,403	-				+1.3
1,982,424	-				+0.7
1,982,529	-				-0.7
1,982,529	-				+1.2
1,982,592	+		Synpcc7942_1906	0.11	-1.8
1,982,610	+		Synpcc7942_1906	0.13	+1.1
1,982,618	-		Synpcc7942_1906	0.14	+0.0
1,982,687	-		Synpcc7942_1906	0.23	+0.3
1,982,704	-		Synpcc7942_1906	0.26	-0.7
1,982,712	+		Synpcc7942_1906	0.27	+0.6
1,982,712	+		Synpcc7942_1906	0.27	-0.6
1,982,717	+		Synpcc7942_1906	0.28	+2.0
1,982,726	+		Synpcc7942_1906	0.29	+0.4
1,982,731	-		Synpcc7942_1906	0.29	-0.3
1,982,736	+		Synpcc7942_1906	0.30	+0.3
1,982,762	-		Synpcc7942_1906	0.34	-1.4
1,982,884	+		Synpcc7942_1906	0.50	-0.8
1,983,026	+		Synpcc7942_1906	0.69	-0.1
1,983,039	-		Synpcc7942_1906	0.71	+1.5
1,983,055	+		Synpcc7942_1906	0.73	+0.8
1,983,069	+		Synpcc7942_1906	0.75	-0.1
1,983,101	-		Synpcc7942_1906	0.79	+0.7
1,983,135	+		Synpcc7942_1906	0.84	-0.3
1,983,153	-		Synpcc7942_1906	0.86	+1.7
1,983,165	+		Synpcc7942_1906	0.88	-0.2
1,983,170	+		Synpcc7942_1906	0.89	-2.1
1,983,175	+		Synpcc7942_1906	0.89	+4.1
1,983,178	-		Synpcc7942_1906	0.90	+0.5
1,983,178	-		Synpcc7942_1906	0.90	+0.9
1,983,199	-				-2.4
1,983,209	+				+2.4
1,983,229	+				+0.8
1,983,242	+				+0.1
1,983,272	+				-0.2
1,983,272	+				+0.2
1,983,272	+				+0.9
1,983,272	+				+0.8
1,983,272	+				+0.5
1,983,272	+				+1.2
1,983,280	-				+0.4
1,983,280	-				+0.4
1,983,280	-				+1.6
1,983,280	-				+1.7
1,983,280	-				-1.2
1,983,280	-				-1.1
1,983,280	-				+0.5
1,983,280	-				+1.5
1,983,280	-				+1.1
1,983,280	-				+0.5
1,983,280	-				+1.5
1,983,280	-				+0.4
1,983,289	+				+0.5
1,983,303	+				-0.2
1,983,349	-				+0.9
1,983,358	+				-0.4
1,983,399	+				-0.4
1,983,407	-				-0.6
1,983,409	+				-2.9