Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1888

Experiment: D-Cycloserine 0.015625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.015625 mg/ml
1,960,623	+		Synpcc7942_1887	0.85	-3.4
1,960,930	-				+1.5
1,960,978	+		Synpcc7942_1888	0.12	-2.9
1,961,016	+				-2.4
1,961,049	-		Synpcc7942_1888	0.19	+0.2
1,961,059	-		Synpcc7942_1888	0.20	-0.4
1,961,066	-		Synpcc7942_1888	0.21	-0.1
1,961,117	+		Synpcc7942_1888	0.26	+1.9
1,961,117	+		Synpcc7942_1888	0.26	+1.1
1,961,117	+		Synpcc7942_1888	0.26	-0.3
1,961,125	+		Synpcc7942_1888	0.26	+0.8
1,961,125	-		Synpcc7942_1888	0.26	+1.2
1,961,125	-		Synpcc7942_1888	0.26	+1.9
1,961,125	-		Synpcc7942_1888	0.26	+1.5
1,961,125	-		Synpcc7942_1888	0.26	+0.4
1,961,125	-		Synpcc7942_1888	0.26	-0.1
1,961,125	-		Synpcc7942_1888	0.26	+0.1
1,961,125	-		Synpcc7942_1888	0.26	+0.1
1,961,125	-		Synpcc7942_1888	0.26	-0.1
1,961,125	-		Synpcc7942_1888	0.26	+0.7
1,961,207	-		Synpcc7942_1888	0.34	+0.5
1,961,270	+		Synpcc7942_1888	0.40	-1.5
1,961,410	+		Synpcc7942_1888	0.54	+0.1
1,961,473	+		Synpcc7942_1888	0.60	+1.5
1,961,517	+		Synpcc7942_1888	0.64	+1.2
1,961,525	-		Synpcc7942_1888	0.65	+2.0
1,961,575	-		Synpcc7942_1888	0.70	+0.3
1,961,632	+		Synpcc7942_1888	0.75	+1.8
1,961,692	-		Synpcc7942_1888	0.81	+0.2
1,961,692	-		Synpcc7942_1888	0.81	+0.2
1,961,692	-		Synpcc7942_1888	0.81	-0.1
1,961,692	-		Synpcc7942_1888	0.81	-1.5
1,961,714	+		Synpcc7942_1888	0.83	+0.6
1,961,714	+		Synpcc7942_1888	0.83	-0.6
1,961,714	+		Synpcc7942_1888	0.83	-0.2
1,961,714	+		Synpcc7942_1888	0.83	+0.8
1,961,722	-		Synpcc7942_1888	0.84	-0.1
1,961,733	-		Synpcc7942_1888	0.85	+1.6
1,961,758	+		Synpcc7942_1888	0.87	+2.3
1,961,808	+				+0.2
1,961,818	+				+0.9
1,961,826	-				+0.9
1,961,863	-				-0.8
1,961,956	+				+0.5
1,961,961	+				+1.4
1,962,088	+				+0.7
1,962,096	+				+0.2
1,962,121	+				+0.2
1,962,129	-				+0.3
1,962,139	+				+1.9
1,962,144	+				+0.5
1,962,144	+				+0.6
1,962,144	+				-1.9
1,962,144	+				-0.1
1,962,144	+				+0.9
1,962,144	+				-1.3
1,962,144	+				-1.1
1,962,144	+				-2.8
1,962,144	+				-1.7
1,962,144	+				+0.9
1,962,144	+				-0.7
1,962,152	-		Synpcc7942_1889	0.10	-1.2
1,962,152	-		Synpcc7942_1889	0.10	-0.1
1,962,152	-		Synpcc7942_1889	0.10	-0.7
1,962,152	-		Synpcc7942_1889	0.10	-0.8
1,962,152	-		Synpcc7942_1889	0.10	+0.4
1,962,152	-		Synpcc7942_1889	0.10	+0.2
1,962,152	-		Synpcc7942_1889	0.10	+0.2
1,962,152	-		Synpcc7942_1889	0.10	-0.1
1,962,152	-		Synpcc7942_1889	0.10	-2.3
1,962,165	-		Synpcc7942_1889	0.11	+0.3
1,962,179	+		Synpcc7942_1889	0.12	-1.1
1,962,245	+		Synpcc7942_1889	0.16	+0.5
1,962,352	+		Synpcc7942_1889	0.23	-0.1
1,962,402	-		Synpcc7942_1889	0.26	+0.3
1,962,406	+		Synpcc7942_1889	0.26	-0.7
1,962,571	+		Synpcc7942_1889	0.37	-0.1
1,962,571	+		Synpcc7942_1889	0.37	-0.3
1,962,579	-		Synpcc7942_1889	0.37	+1.1
1,962,579	-		Synpcc7942_1889	0.37	-1.1
1,962,579	-		Synpcc7942_1889	0.37	-0.5
1,962,579	-		Synpcc7942_1889	0.37	-1.1
1,962,641	+		Synpcc7942_1889	0.41	-0.0
1,962,714	+		Synpcc7942_1889	0.46	-2.3
1,962,732	-		Synpcc7942_1889	0.47	-1.7
1,962,737	+		Synpcc7942_1889	0.47	-0.4
1,962,738	+		Synpcc7942_1889	0.47	-0.3
1,962,738	+		Synpcc7942_1889	0.47	+0.2
1,962,738	+		Synpcc7942_1889	0.47	-0.3
1,962,738	+		Synpcc7942_1889	0.47	+0.8
1,962,741	-		Synpcc7942_1889	0.47	-0.1
1,962,744	+		Synpcc7942_1889	0.47	-1.3
1,962,746	-		Synpcc7942_1889	0.48	+0.7
1,962,766	-		Synpcc7942_1889	0.49	-1.1
1,962,818	+		Synpcc7942_1889	0.52	-0.1
1,962,818	+		Synpcc7942_1889	0.52	-1.1
1,962,818	+		Synpcc7942_1889	0.52	+2.2
1,962,826	-		Synpcc7942_1889	0.53	+0.5
1,962,850	+		Synpcc7942_1889	0.54	+0.3
1,962,877	-		Synpcc7942_1889	0.56	-1.7
1,962,877	-		Synpcc7942_1889	0.56	-2.7