Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1837

Experiment: D-Cycloserine 0.015625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.015625 mg/ml
1,903,055	-				-2.1
1,903,055	-				+0.5
1,903,083	-				-0.6
1,903,084	-				-0.5
1,903,094	+		Synpcc7942_1835	0.10	+0.9
1,903,099	-		Synpcc7942_1835	0.11	+0.7
1,903,100	-		Synpcc7942_1835	0.11	+0.6
1,903,104	+		Synpcc7942_1835	0.12	-0.1
1,903,122	+		Synpcc7942_1835	0.15	+0.2
1,903,141	+		Synpcc7942_1835	0.18	-0.1
1,903,142	+		Synpcc7942_1835	0.18	-0.7
1,903,144	-		Synpcc7942_1835	0.18	+0.6
1,903,149	-		Synpcc7942_1835	0.19	-0.1
1,903,149	-		Synpcc7942_1835	0.19	-0.4
1,903,149	-		Synpcc7942_1835	0.19	+0.9
1,903,149	-		Synpcc7942_1835	0.19	+1.0
1,903,157	-		Synpcc7942_1835	0.20	+0.5
1,903,157	-		Synpcc7942_1835	0.20	-0.1
1,903,200	-		Synpcc7942_1835	0.27	+1.2
1,903,242	-		Synpcc7942_1835	0.34	+0.9
1,903,248	-		Synpcc7942_1835	0.35	-1.3
1,903,268	+		Synpcc7942_1835	0.38	-0.9
1,903,328	-		Synpcc7942_1835	0.47	-0.4
1,903,367	-		Synpcc7942_1835	0.54	+0.1
1,903,375	+		Synpcc7942_1835	0.55	+0.7
1,903,394	+		Synpcc7942_1835	0.58	+0.2
1,903,402	-		Synpcc7942_1835	0.59	+1.3
1,903,421	-		Synpcc7942_1835	0.62	+0.6
1,903,421	-		Synpcc7942_1835	0.62	-1.1
1,903,446	+		Synpcc7942_1835	0.66	-0.1
1,903,447	-		Synpcc7942_1835	0.66	-0.1
1,903,449	-		Synpcc7942_1835	0.67	+0.1
1,903,504	-		Synpcc7942_1835	0.75	-0.4
1,903,519	+		Synpcc7942_1835	0.78	+0.9
1,903,560	-		Synpcc7942_1835	0.84	+0.5
1,903,560	-		Synpcc7942_1835	0.84	-0.9
1,904,056	-				-2.9
1,904,123	-		Synpcc7942_1837	0.27	+0.4
1,904,153	+		Synpcc7942_1837	0.36	-0.3
1,904,163	+		Synpcc7942_1837	0.39	+0.7
1,904,163	+		Synpcc7942_1837	0.39	+0.1
1,904,163	+		Synpcc7942_1837	0.39	-0.8
1,904,171	-		Synpcc7942_1837	0.41	+1.5
1,904,176	-		Synpcc7942_1837	0.42	+0.9
1,904,184	+		Synpcc7942_1837	0.45	-0.7
1,904,184	+		Synpcc7942_1837	0.45	+0.8
1,904,244	-		Synpcc7942_1837	0.62	+0.5
1,904,384	+				+0.5
1,904,403	+				-0.2
1,904,416	+				-0.7
1,904,423	-				-0.7
1,904,425	-				-0.4
1,904,436	-				-0.7
1,904,442	-				-0.6
1,904,446	+				+0.3
1,904,446	+				+1.1
1,904,454	-				+0.1
1,904,454	-				-0.1
1,904,454	-				+0.6
1,904,454	-				-0.3
1,904,454	-				+0.9
1,904,456	+				-0.1
1,904,466	-				+0.8
1,904,469	-				-0.8
1,904,469	-				+0.1
1,904,518	+				+1.4
1,904,562	-				-2.9
1,904,571	-				-0.5
1,904,609	+	chlB	Synpcc7942_1838	0.12	+1.3
1,904,609	+	chlB	Synpcc7942_1838	0.12	+0.4
1,904,624	+	chlB	Synpcc7942_1838	0.13	+0.2
1,904,632	-	chlB	Synpcc7942_1838	0.13	-0.7
1,904,658	+	chlB	Synpcc7942_1838	0.15	+0.3
1,904,659	+	chlB	Synpcc7942_1838	0.15	-0.8
1,904,667	-	chlB	Synpcc7942_1838	0.15	-0.5
1,904,672	-	chlB	Synpcc7942_1838	0.16	-1.1
1,904,712	-	chlB	Synpcc7942_1838	0.18	-1.1
1,904,717	+	chlB	Synpcc7942_1838	0.19	+0.4
1,904,791	+	chlB	Synpcc7942_1838	0.24	+0.1
1,904,795	+	chlB	Synpcc7942_1838	0.24	-1.3
1,904,831	-	chlB	Synpcc7942_1838	0.26	-0.6
1,904,881	-	chlB	Synpcc7942_1838	0.29	-0.5
1,904,891	+	chlB	Synpcc7942_1838	0.30	+1.5
1,904,896	+	chlB	Synpcc7942_1838	0.30	+0.6
1,904,899	-	chlB	Synpcc7942_1838	0.31	+0.5
1,904,904	-	chlB	Synpcc7942_1838	0.31	+0.3
1,904,919	-	chlB	Synpcc7942_1838	0.32	+2.1
1,904,924	-	chlB	Synpcc7942_1838	0.32	-0.1
1,904,927	-	chlB	Synpcc7942_1838	0.32	-0.2
1,905,066	+	chlB	Synpcc7942_1838	0.42	+0.3
1,905,066	+	chlB	Synpcc7942_1838	0.42	+0.3
1,905,074	-	chlB	Synpcc7942_1838	0.42	+0.2
1,905,103	+	chlB	Synpcc7942_1838	0.44	+0.4
1,905,109	-	chlB	Synpcc7942_1838	0.44	-1.9
1,905,143	+	chlB	Synpcc7942_1838	0.47	-0.8
1,905,146	-	chlB	Synpcc7942_1838	0.47	-2.0
1,905,167	+	chlB	Synpcc7942_1838	0.48	+0.6
1,905,175	-	chlB	Synpcc7942_1838	0.49	+1.9
1,905,215	-	chlB	Synpcc7942_1838	0.51	-0.1
1,905,251	-	chlB	Synpcc7942_1838	0.54	-1.2
1,905,251	-	chlB	Synpcc7942_1838	0.54	+0.2
1,905,253	+	chlB	Synpcc7942_1838	0.54	+0.3
1,905,253	+	chlB	Synpcc7942_1838	0.54	+0.6
1,905,253	+	chlB	Synpcc7942_1838	0.54	-1.5
1,905,261	-	chlB	Synpcc7942_1838	0.54	-0.3
1,905,261	-	chlB	Synpcc7942_1838	0.54	-0.1
1,905,267	-	chlB	Synpcc7942_1838	0.55	+2.0
1,905,272	-	chlB	Synpcc7942_1838	0.55	-1.1
1,905,293	-	chlB	Synpcc7942_1838	0.56	+1.4
1,905,293	-	chlB	Synpcc7942_1838	0.56	-0.4
1,905,302	+	chlB	Synpcc7942_1838	0.57	+1.9
1,905,302	+	chlB	Synpcc7942_1838	0.57	-0.9
1,905,310	-	chlB	Synpcc7942_1838	0.58	+1.1
1,905,310	-	chlB	Synpcc7942_1838	0.58	-0.3
1,905,322	-	chlB	Synpcc7942_1838	0.58	-0.7
1,905,342	+	chlB	Synpcc7942_1838	0.60	+0.3
1,905,359	-	chlB	Synpcc7942_1838	0.61	-0.1