Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1752

Experiment: D-Cycloserine 0.015625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.015625 mg/ml
1,820,020	+	fer	Synpcc7942_1749	0.68	+0.9
1,820,033	-	fer	Synpcc7942_1749	0.71	+2.2
1,820,047	+	fer	Synpcc7942_1749	0.75	-1.1
1,820,047	+	fer	Synpcc7942_1749	0.75	+0.3
1,820,055	-	fer	Synpcc7942_1749	0.77	+0.5
1,820,059	+	fer	Synpcc7942_1749	0.78	-2.4
1,820,059	+	fer	Synpcc7942_1749	0.78	+0.1
1,820,067	-	fer	Synpcc7942_1749	0.80	-0.9
1,820,142	+				-0.1
1,820,143	+				-0.5
1,820,143	+				-0.2
1,820,149	-				+2.2
1,820,201	-	ycf35	Synpcc7942_1750	0.14	+0.6
1,820,218	+	ycf35	Synpcc7942_1750	0.19	-0.5
1,820,218	-	ycf35	Synpcc7942_1750	0.19	+0.9
1,820,227	-	ycf35	Synpcc7942_1750	0.21	+0.1
1,820,236	+	ycf35	Synpcc7942_1750	0.23	+1.3
1,820,244	-	ycf35	Synpcc7942_1750	0.25	-1.5
1,820,249	-	ycf35	Synpcc7942_1750	0.27	+0.6
1,820,263	-				+1.5
1,820,265	+	ycf35	Synpcc7942_1750	0.31	-1.1
1,820,301	-	ycf35	Synpcc7942_1750	0.40	-0.1
1,820,302	-	ycf35	Synpcc7942_1750	0.40	-2.1
1,820,323	+	ycf35	Synpcc7942_1750	0.46	-0.1
1,820,330	+	ycf35	Synpcc7942_1750	0.48	+0.5
1,820,331	+	ycf35	Synpcc7942_1750	0.48	-1.1
1,820,338	-	ycf35	Synpcc7942_1750	0.50	+1.2
1,820,339	-	ycf35	Synpcc7942_1750	0.50	+2.2
1,820,339	-	ycf35	Synpcc7942_1750	0.50	-1.4
1,820,346	-	ycf35	Synpcc7942_1750	0.52	-0.5
1,820,348	+	ycf35	Synpcc7942_1750	0.52	-0.0
1,820,372	+	ycf35	Synpcc7942_1750	0.58	+1.2
1,820,422	-	ycf35	Synpcc7942_1750	0.71	-1.4
1,820,425	-	ycf35	Synpcc7942_1750	0.72	-2.3
1,820,432	+	ycf35	Synpcc7942_1750	0.74	-1.9
1,820,432	+				-0.1
1,820,432	+	ycf35	Synpcc7942_1750	0.74	+0.5
1,820,440	-	ycf35	Synpcc7942_1750	0.76	-0.7
1,820,493	+	ycf35	Synpcc7942_1750	0.90	-0.7
1,820,518	+				+0.4
1,820,526	-				-0.2
1,820,530	+				+0.7
1,820,545	-				-0.3
1,820,567	-				+1.6
1,820,605	+		Synpcc7942_1751	0.15	-1.0
1,820,641	-		Synpcc7942_1751	0.32	-0.8
1,820,656	-		Synpcc7942_1751	0.40	-0.7
1,820,656	-		Synpcc7942_1751	0.40	-0.7
1,820,662	+		Synpcc7942_1751	0.43	+0.8
1,820,686	+		Synpcc7942_1751	0.54	-0.7
1,820,693	+		Synpcc7942_1751	0.58	+0.3
1,820,693	+		Synpcc7942_1751	0.58	+0.1
1,820,696	-		Synpcc7942_1751	0.59	+0.5
1,820,705	+		Synpcc7942_1751	0.64	+0.3
1,820,886	+				-1.8
1,820,886	+				-0.9
1,820,886	+				+0.4
1,820,886	+				+0.9
1,820,886	+				+0.6
1,820,886	+				+1.3
1,820,894	-				-0.7
1,820,894	-				+1.2
1,820,894	-				+0.2
1,820,894	-				+0.4
1,820,894	-				+0.9
1,820,894	-				-0.5
1,820,898	+				+0.5
1,820,959	+				-0.1
1,820,968	+				-0.9
1,820,974	+				+1.8
1,820,977	+				+1.2
1,820,985	-				-0.1
1,821,017	-				-0.2
1,821,017	-				+1.1
1,821,022	-				+0.6
1,821,022	-				+3.2
1,821,024	+				+0.4
1,821,046	+				-1.2
1,821,290	-		Synpcc7942_1752	0.36	-2.9
1,821,342	-		Synpcc7942_1752	0.43	-1.4
1,821,400	+		Synpcc7942_1752	0.51	-2.7
1,821,795	+				+1.3
1,821,801	+				-0.5
1,821,810	+				+1.4
1,821,813	-				-0.0
1,821,813	-				+0.1
1,821,837	+				+1.9
1,821,875	+				-1.1
1,821,897	+				-0.7
1,821,905	-				-1.4
1,821,914	-				+1.6
1,821,924	+				-0.9
1,821,940	+		Synpcc7942_1753	0.11	+0.7
1,821,948	-		Synpcc7942_1753	0.12	-0.4
1,821,948	-		Synpcc7942_1753	0.12	-0.3
1,821,976	+		Synpcc7942_1753	0.18	+2.5
1,821,977	-				-0.1
1,821,984	-		Synpcc7942_1753	0.20	-0.4
1,821,984	-		Synpcc7942_1753	0.20	-0.4
1,821,999	+		Synpcc7942_1753	0.23	-1.1
1,821,999	+		Synpcc7942_1753	0.23	+0.2
1,822,006	-		Synpcc7942_1753	0.25	+1.5
1,822,007	-		Synpcc7942_1753	0.25	+0.3
1,822,016	+		Synpcc7942_1753	0.27	+0.3
1,822,016	+		Synpcc7942_1753	0.27	-1.4
1,822,024	-		Synpcc7942_1753	0.29	+0.3
1,822,048	+		Synpcc7942_1753	0.34	+1.5
1,822,071	-		Synpcc7942_1753	0.39	+0.7
1,822,074	+		Synpcc7942_1753	0.40	-0.7
1,822,082	-		Synpcc7942_1753	0.41	+1.4
1,822,082	-		Synpcc7942_1753	0.41	+0.1
1,822,120	-		Synpcc7942_1753	0.49	-0.5
1,822,134	+		Synpcc7942_1753	0.52	-1.1
1,822,134	+		Synpcc7942_1753	0.52	+1.3
1,822,134	+		Synpcc7942_1753	0.52	-0.6
1,822,134	+		Synpcc7942_1753	0.52	-0.1
1,822,141	+		Synpcc7942_1753	0.54	+0.9
1,822,142	-		Synpcc7942_1753	0.54	+0.4
1,822,182	-		Synpcc7942_1753	0.63	-0.1
1,822,221	+		Synpcc7942_1753	0.71	+0.4
1,822,221	+		Synpcc7942_1753	0.71	+1.5
1,822,226	+		Synpcc7942_1753	0.72	-1.4
1,822,229	-		Synpcc7942_1753	0.73	-0.1
1,822,232	+		Synpcc7942_1753	0.74	-0.5
1,822,240	-		Synpcc7942_1753	0.75	+1.5
1,822,258	-		Synpcc7942_1753	0.79	-0.3
1,822,267	-		Synpcc7942_1753	0.81	-0.4
1,822,267	-		Synpcc7942_1753	0.81	+0.2
1,822,267	-		Synpcc7942_1753	0.81	-0.1
1,822,299	-		Synpcc7942_1753	0.88	+2.1
1,822,321	-				+0.2
1,822,325	+				+1.8
1,822,325	+				+1.2
1,822,325	+				+1.1
1,822,325	+				+1.5
1,822,325	+				-1.3
1,822,333	-				+0.5
1,822,337	+				+0.3
1,822,465	+		Synpcc7942_1754	0.78	+1.4
1,822,465	+		Synpcc7942_1754	0.78	+0.2
1,822,465	+		Synpcc7942_1754	0.78	+0.9
1,822,473	-		Synpcc7942_1754	0.84	-0.1
1,822,473	-		Synpcc7942_1754	0.84	-0.7
1,822,482	-				-0.3
1,822,493	-				-3.4
1,822,583	-				+0.7
1,822,600	+				+0.6
1,822,619	+				-0.7
1,822,625	-				-0.7
1,822,625	-				-0.1
1,822,627	+				+0.2
1,822,632	-				-2.3
1,822,681	-		Synpcc7942_1755	0.11	-1.0
1,822,683	+		Synpcc7942_1755	0.11	-1.4
1,822,733	+		Synpcc7942_1755	0.14	+0.1
1,822,741	-		Synpcc7942_1755	0.14	+0.9
1,822,743	+		Synpcc7942_1755	0.14	-1.7
1,822,759	+		Synpcc7942_1755	0.15	-1.5