Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1747

Experiment: D-Cycloserine 0.015625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.015625 mg/ml
1,816,841	-	rpoD2	Synpcc7942_1746	0.25	-0.9
1,816,925	-	rpoD2	Synpcc7942_1746	0.34	-1.2
1,816,969	+	rpoD2	Synpcc7942_1746	0.38	-3.7
1,817,113	+	rpoD2	Synpcc7942_1746	0.53	-3.3
1,817,113	+	rpoD2	Synpcc7942_1746	0.53	-0.7
1,817,113	+	rpoD2	Synpcc7942_1746	0.53	-1.4
1,817,113	+	rpoD2	Synpcc7942_1746	0.53	-1.1
1,817,113	+	rpoD2	Synpcc7942_1746	0.53	-2.7
1,817,121	-	rpoD2	Synpcc7942_1746	0.54	+0.6
1,817,121	-	rpoD2	Synpcc7942_1746	0.54	-0.7
1,817,121	-	rpoD2	Synpcc7942_1746	0.54	-1.7
1,817,121	-	rpoD2	Synpcc7942_1746	0.54	-0.1
1,817,148	-	rpoD2	Synpcc7942_1746	0.57	-1.1
1,817,163	-	rpoD2	Synpcc7942_1746	0.58	-1.4
1,817,170	-	rpoD2	Synpcc7942_1746	0.59	-2.1
1,817,252	-	rpoD2	Synpcc7942_1746	0.68	-0.9
1,817,322	+	rpoD2	Synpcc7942_1746	0.75	-1.1
1,817,373	+	rpoD2	Synpcc7942_1746	0.80	-1.6
1,817,388	+	rpoD2	Synpcc7942_1746	0.82	-0.9
1,817,395	-	rpoD2	Synpcc7942_1746	0.83	-1.1
1,817,396	-	rpoD2	Synpcc7942_1746	0.83	-2.4
1,817,396	-	rpoD2	Synpcc7942_1746	0.83	-1.4
1,817,472	-				-1.3
1,817,478	-				-0.1
1,817,514	+				-1.1
1,817,519	+				-2.7
1,817,522	-				-2.7
1,817,524	+				-0.9
1,817,524	+				-1.6
1,817,532	-				-1.1
1,817,539	+				-0.3
1,817,539	+				-1.8
1,817,539	+				-1.5
1,817,539	+				-0.7
1,817,539	+				-1.1
1,817,547	-				-2.3
1,817,547	-				-0.5
1,817,547	-				-0.5
1,817,547	-				-2.1
1,817,547	-				-1.1
1,817,620	-				-0.4
1,817,680	+				-0.1
1,817,704	+				-2.8
1,817,712	-				+0.0
1,817,727	+				-1.3
1,817,809	-				-0.8
1,817,867	+				-2.9
1,817,874	+				-0.8
1,817,899	+		Synpcc7942_1747	0.10	-1.7
1,817,909	+		Synpcc7942_1747	0.11	-3.0
1,817,909	+		Synpcc7942_1747	0.11	-1.1
1,817,914	+		Synpcc7942_1747	0.11	-1.7
1,817,915	-		Synpcc7942_1747	0.12	-0.1
1,817,917	-		Synpcc7942_1747	0.12	-0.3
1,817,917	-		Synpcc7942_1747	0.12	+1.5
1,818,056	-		Synpcc7942_1747	0.23	-0.1
1,818,056	-		Synpcc7942_1747	0.23	-1.1
1,818,058	-		Synpcc7942_1747	0.24	-0.9
1,818,058	-		Synpcc7942_1747	0.24	-2.4
1,818,058	-		Synpcc7942_1747	0.24	-1.3
1,818,058	-		Synpcc7942_1747	0.24	-2.8
1,818,071	+		Synpcc7942_1747	0.25	-1.1
1,818,073	+		Synpcc7942_1747	0.25	-0.5
1,818,073	+		Synpcc7942_1747	0.25	+0.0
1,818,090	+		Synpcc7942_1747	0.26	-1.1
1,818,096	+		Synpcc7942_1747	0.27	-1.7
1,818,098	-		Synpcc7942_1747	0.27	-1.1
1,818,101	+		Synpcc7942_1747	0.27	-1.6
1,818,101	+		Synpcc7942_1747	0.27	-0.9
1,818,118	+		Synpcc7942_1747	0.29	-1.8
1,818,129	+		Synpcc7942_1747	0.30	-1.7
1,818,155	-		Synpcc7942_1747	0.32	+0.5
1,818,186	-		Synpcc7942_1747	0.34	-0.8
1,818,212	-		Synpcc7942_1747	0.37	-1.1
1,818,220	+		Synpcc7942_1747	0.37	-0.8
1,818,227	+		Synpcc7942_1747	0.38	-0.6
1,818,228	+		Synpcc7942_1747	0.38	-1.3
1,818,234	+		Synpcc7942_1747	0.38	-0.3
1,818,250	+		Synpcc7942_1747	0.40	-1.1
1,818,279	-		Synpcc7942_1747	0.42	-1.0
1,818,287	-		Synpcc7942_1747	0.43	-0.1
1,818,319	+		Synpcc7942_1747	0.46	-0.1
1,818,319	+		Synpcc7942_1747	0.46	-1.7
1,818,319	+		Synpcc7942_1747	0.46	-1.1
1,818,319	+		Synpcc7942_1747	0.46	-2.4
1,818,319	+		Synpcc7942_1747	0.46	-0.3
1,818,319	+		Synpcc7942_1747	0.46	-0.6
1,818,319	+		Synpcc7942_1747	0.46	-2.1
1,818,327	-		Synpcc7942_1747	0.46	+0.9
1,818,327	-		Synpcc7942_1747	0.46	-0.3
1,818,327	-		Synpcc7942_1747	0.46	-1.1
1,818,327	-		Synpcc7942_1747	0.46	-0.9
1,818,328	+		Synpcc7942_1747	0.46	-3.1
1,818,338	+		Synpcc7942_1747	0.47	-1.7
1,818,360	-		Synpcc7942_1747	0.49	-1.1
1,818,368	+		Synpcc7942_1747	0.50	-1.9
1,818,370	-		Synpcc7942_1747	0.50	-0.7
1,818,410	+		Synpcc7942_1747	0.53	+1.2
1,818,423	-		Synpcc7942_1747	0.54	-1.3
1,818,423	-		Synpcc7942_1747	0.54	-1.9
1,818,435	+		Synpcc7942_1747	0.55	-1.3
1,818,516	+		Synpcc7942_1747	0.62	-0.1
1,818,526	+		Synpcc7942_1747	0.63	-2.6
1,818,545	+		Synpcc7942_1747	0.65	-2.4
1,818,559	+		Synpcc7942_1747	0.66	+0.4
1,818,567	-		Synpcc7942_1747	0.67	+0.6
1,818,567	-		Synpcc7942_1747	0.67	-0.9
1,818,572	-		Synpcc7942_1747	0.67	-0.1
1,818,574	+		Synpcc7942_1747	0.67	-1.1
1,818,584	+		Synpcc7942_1747	0.68	-0.5
1,818,592	-		Synpcc7942_1747	0.69	-1.7
1,818,735	+		Synpcc7942_1747	0.81	+0.2
1,818,735	+		Synpcc7942_1747	0.81	-1.0
1,818,758	+		Synpcc7942_1747	0.83	-0.9
1,818,766	-		Synpcc7942_1747	0.83	-2.1
1,818,790	+		Synpcc7942_1747	0.85	-0.5
1,818,792	-		Synpcc7942_1747	0.86	-2.4
1,818,809	-		Synpcc7942_1747	0.87	-0.4
1,818,809	-		Synpcc7942_1747	0.87	-1.4
1,818,838	-		Synpcc7942_1747	0.89	-0.0
1,818,838	-		Synpcc7942_1747	0.89	+0.6
1,818,848	-				-1.3
1,818,853	+				-0.9
1,818,979	+				+1.5
1,818,987	-				-0.8
1,818,987	-				+1.7
1,818,990	-				-1.3
1,819,050	-				-1.1
1,819,064	-				+0.4
1,819,071	-		Synpcc7942_1748	0.11	-1.2
1,819,077	-		Synpcc7942_1748	0.11	-3.1
1,819,093	-		Synpcc7942_1748	0.14	+0.1
1,819,114	+		Synpcc7942_1748	0.16	-1.0
1,819,147	+		Synpcc7942_1748	0.21	+1.2
1,819,150	-		Synpcc7942_1748	0.21	+1.2
1,819,182	+		Synpcc7942_1748	0.25	+0.8
1,819,189	+		Synpcc7942_1748	0.26	+0.1
1,819,196	+		Synpcc7942_1748	0.27	-0.9
1,819,223	+		Synpcc7942_1748	0.31	+0.1
1,819,231	-		Synpcc7942_1748	0.32	-0.6
1,819,231	-		Synpcc7942_1748	0.32	+1.2
1,819,234	+		Synpcc7942_1748	0.32	+0.5
1,819,245	+		Synpcc7942_1748	0.33	-2.1
1,819,251	+		Synpcc7942_1748	0.34	-0.1
1,819,254	-		Synpcc7942_1748	0.35	+1.0
1,819,259	-		Synpcc7942_1748	0.35	-2.4
1,819,264	-		Synpcc7942_1748	0.36	+1.2
1,819,264	-		Synpcc7942_1748	0.36	+0.2
1,819,337	+		Synpcc7942_1748	0.46	-0.7
1,819,337	+		Synpcc7942_1748	0.46	-0.3
1,819,346	+		Synpcc7942_1748	0.47	+0.0
1,819,347	+		Synpcc7942_1748	0.47	+0.0
1,819,347	+		Synpcc7942_1748	0.47	+0.1
1,819,355	-		Synpcc7942_1748	0.48	+0.0
1,819,355	-		Synpcc7942_1748	0.48	-0.1
1,819,355	-		Synpcc7942_1748	0.48	+0.7
1,819,359	+		Synpcc7942_1748	0.48	-0.1
1,819,397	-		Synpcc7942_1748	0.53	+0.4
1,819,408	+		Synpcc7942_1748	0.55	-0.1
1,819,408	+		Synpcc7942_1748	0.55	-1.1
1,819,416	-		Synpcc7942_1748	0.56	-0.6
1,819,416	-		Synpcc7942_1748	0.56	+1.1
1,819,416	-		Synpcc7942_1748	0.56	+0.1
1,819,463	-		Synpcc7942_1748	0.62	+0.1
1,819,475	+		Synpcc7942_1748	0.64	+0.2
1,819,475	+		Synpcc7942_1748	0.64	+0.6
1,819,475	+		Synpcc7942_1748	0.64	+0.2
1,819,477	+		Synpcc7942_1748	0.64	-0.3
1,819,483	-		Synpcc7942_1748	0.65	-2.8
1,819,483	-		Synpcc7942_1748	0.65	-2.6
1,819,483	-		Synpcc7942_1748	0.65	+0.9
1,819,512	-		Synpcc7942_1748	0.69	-2.0
1,819,536	-		Synpcc7942_1748	0.72	-2.9
1,819,550	-		Synpcc7942_1748	0.73	-0.8
1,819,581	+		Synpcc7942_1748	0.78	-0.7
1,819,589	-		Synpcc7942_1748	0.79	+0.5
1,819,618	-		Synpcc7942_1748	0.82	-0.7
1,819,624	+		Synpcc7942_1748	0.83	+1.5
1,819,655	-		Synpcc7942_1748	0.87	-2.1
1,819,659	-		Synpcc7942_1748	0.88	-1.1
1,819,759	-				-2.1
1,819,781	+				+0.7
1,819,801	-	fer	Synpcc7942_1749	0.12	+1.5
1,819,850	+	fer	Synpcc7942_1749	0.24	+0.2
1,819,852	+	fer	Synpcc7942_1749	0.25	+0.8
1,819,852	+	fer	Synpcc7942_1749	0.25	-0.0
1,819,873	+	fer	Synpcc7942_1749	0.30	-0.3
1,819,883	+	fer	Synpcc7942_1749	0.33	+0.9
1,819,891	-	fer	Synpcc7942_1749	0.35	+0.2
1,819,891	-	fer	Synpcc7942_1749	0.35	-1.6
1,819,928	-	fer	Synpcc7942_1749	0.44	-0.1
1,819,946	+	fer	Synpcc7942_1749	0.49	-0.7
1,819,962	+	fer	Synpcc7942_1749	0.53	+0.7