Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1731

Experiment: D-Cycloserine 0.015625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.015625 mg/ml
1,801,686	-	kdpD	Synpcc7942_1729	0.71	+1.3
1,801,686	-	kdpD	Synpcc7942_1729	0.71	-1.7
1,801,722	+	kdpD	Synpcc7942_1729	0.74	+0.3
1,801,738	-	kdpD	Synpcc7942_1729	0.76	-0.1
1,801,768	+	kdpD	Synpcc7942_1729	0.79	-0.4
1,801,768	+	kdpD	Synpcc7942_1729	0.79	+0.0
1,801,796	-	kdpD	Synpcc7942_1729	0.81	-0.1
1,801,805	-	kdpD	Synpcc7942_1729	0.82	+0.1
1,801,842	+	kdpD	Synpcc7942_1729	0.85	-1.3
1,801,852	+	kdpD	Synpcc7942_1729	0.86	+0.5
1,801,856	-	kdpD	Synpcc7942_1729	0.87	-0.5
1,801,858	-	kdpD	Synpcc7942_1729	0.87	+0.4
1,801,878	+	kdpD	Synpcc7942_1729	0.88	+0.8
1,801,893	-	kdpD	Synpcc7942_1729	0.90	-0.4
1,801,893	-	kdpD	Synpcc7942_1729	0.90	+0.3
1,801,938	-				-0.1
1,801,944	-				-0.1
1,801,952	-				-1.1
1,801,959	-				-0.7
1,802,020	+				+0.7
1,802,022	+				-0.9
1,802,028	-				-0.3
1,802,030	-				-0.1
1,802,030	-				-0.1
1,802,030	-				+2.5
1,802,040	-				+1.4
1,802,040	-				+0.9
1,802,042	+				+0.4
1,802,080	+				-0.1
1,802,080	+				-2.7
1,802,088	-				+1.5
1,802,088	-				+0.0
1,802,093	-				-1.1
1,802,123	-		Synpcc7942_1730	0.12	-0.2
1,802,135	-		Synpcc7942_1730	0.14	+0.9
1,802,144	-		Synpcc7942_1730	0.16	-0.1
1,802,174	+		Synpcc7942_1730	0.21	-1.7
1,802,178	-		Synpcc7942_1730	0.22	+0.3
1,802,188	+		Synpcc7942_1730	0.23	+0.1
1,802,196	-				+0.9
1,802,201	-		Synpcc7942_1730	0.26	+0.1
1,802,252	-		Synpcc7942_1730	0.34	+0.9
1,802,252	-		Synpcc7942_1730	0.34	+0.3
1,802,262	-		Synpcc7942_1730	0.36	-0.6
1,802,294	+		Synpcc7942_1730	0.41	+0.5
1,802,309	+		Synpcc7942_1730	0.44	+0.3
1,802,309	+		Synpcc7942_1730	0.44	-2.2
1,802,309	+		Synpcc7942_1730	0.44	-0.6
1,802,316	+		Synpcc7942_1730	0.45	+0.4
1,802,317	-		Synpcc7942_1730	0.45	-0.1
1,802,317	-		Synpcc7942_1730	0.45	+0.3
1,802,325	+		Synpcc7942_1730	0.47	+2.9
1,802,345	+		Synpcc7942_1730	0.50	-1.1
1,802,351	-		Synpcc7942_1730	0.51	+0.9
1,802,353	+		Synpcc7942_1730	0.51	-0.1
1,802,353	-		Synpcc7942_1730	0.51	-0.6
1,802,353	-		Synpcc7942_1730	0.51	+1.4
1,802,363	-		Synpcc7942_1730	0.53	+1.5
1,802,374	+		Synpcc7942_1730	0.55	-0.2
1,802,391	+		Synpcc7942_1730	0.58	-0.9
1,802,391	+		Synpcc7942_1730	0.58	+1.5
1,802,391	+		Synpcc7942_1730	0.58	+2.2
1,802,393	-		Synpcc7942_1730	0.58	+0.5
1,802,399	-		Synpcc7942_1730	0.59	+1.5
1,802,400	-		Synpcc7942_1730	0.59	-0.3
1,802,400	-		Synpcc7942_1730	0.59	-2.4
1,802,400	-		Synpcc7942_1730	0.59	+0.3
1,802,400	-		Synpcc7942_1730	0.59	-2.1
1,802,453	+		Synpcc7942_1730	0.68	-1.9
1,802,456	-		Synpcc7942_1730	0.69	+0.4
1,802,478	+		Synpcc7942_1730	0.72	-0.9
1,802,478	+		Synpcc7942_1730	0.72	+0.4
1,802,486	-		Synpcc7942_1730	0.74	-1.7
1,802,486	-		Synpcc7942_1730	0.74	+0.5
1,802,499	+		Synpcc7942_1730	0.76	-0.2
1,802,504	+		Synpcc7942_1730	0.77	+2.0
1,802,511	+		Synpcc7942_1730	0.78	+0.4
1,802,558	-		Synpcc7942_1730	0.86	-1.0
1,802,624	+				+0.1
1,802,624	+				+0.3
1,802,624	+				-1.4
1,802,624	+				+0.4
1,802,632	-				+0.7
1,802,632	-				+0.9
1,802,632	-				+1.0
1,802,634	+				-0.2
1,802,635	+				+0.9
1,802,635	+				-0.1
1,802,635	+				-0.7
1,802,635	+				-2.7
1,802,640	+				+0.9
1,802,643	-				+0.3
1,802,643	-				-0.1
1,802,643	-				+0.3
1,802,645	+				+0.6
1,802,655	-				-0.3
1,802,665	-				-0.8
1,802,665	-				+0.0
1,802,675	-				+0.3
1,802,691	-				+1.0
1,802,720	-				-0.0
1,802,736	+		Synpcc7942_1731	0.10	+0.7
1,802,737	-		Synpcc7942_1731	0.10	-0.2
1,802,737	-		Synpcc7942_1731	0.10	-3.3
1,802,737	-		Synpcc7942_1731	0.10	-0.1
1,802,748	+		Synpcc7942_1731	0.13	+0.9
1,802,759	+		Synpcc7942_1731	0.15	+1.3
1,802,797	+		Synpcc7942_1731	0.23	+0.9
1,802,802	-		Synpcc7942_1731	0.24	+0.1
1,802,815	-		Synpcc7942_1731	0.27	+1.5
1,802,824	-		Synpcc7942_1731	0.28	+0.9
1,802,906	+		Synpcc7942_1731	0.45	+1.0
1,802,906	+		Synpcc7942_1731	0.45	+1.3
1,802,906	+		Synpcc7942_1731	0.45	-2.3
1,802,939	+		Synpcc7942_1731	0.52	-1.0
1,802,944	+		Synpcc7942_1731	0.53	-1.7
1,802,944	+		Synpcc7942_1731	0.53	+1.0
1,802,944	+		Synpcc7942_1731	0.53	-0.1
1,802,952	-		Synpcc7942_1731	0.55	+2.2
1,802,952	-		Synpcc7942_1731	0.55	-2.4
1,802,952	-		Synpcc7942_1731	0.55	+0.5
1,802,952	-		Synpcc7942_1731	0.55	+0.5
1,802,954	+		Synpcc7942_1731	0.55	-0.8
1,802,981	+		Synpcc7942_1731	0.61	+1.5
1,802,981	+		Synpcc7942_1731	0.61	+0.9
1,802,981	+		Synpcc7942_1731	0.61	+0.7
1,802,981	+		Synpcc7942_1731	0.61	+0.5
1,803,067	+		Synpcc7942_1731	0.78	+1.3
1,803,067	+		Synpcc7942_1731	0.78	-0.3
1,803,075	-		Synpcc7942_1731	0.80	+0.7
1,803,085	+		Synpcc7942_1731	0.82	-0.1
1,803,085	+		Synpcc7942_1731	0.82	+0.3
1,803,089	+		Synpcc7942_1731	0.83	+0.3
1,803,093	-		Synpcc7942_1731	0.84	-0.9
1,803,137	-				-0.1
1,803,137	-				-0.1
1,803,137	-				+0.2
1,803,146	+				+0.9
1,803,154	-				+0.5
1,803,167	-				+1.2
1,803,253	+		Synpcc7942_1732	0.21	-1.6
1,803,284	-		Synpcc7942_1732	0.28	-0.2
1,803,287	+		Synpcc7942_1732	0.29	-0.9
1,803,297	+		Synpcc7942_1732	0.31	+0.2
1,803,305	-		Synpcc7942_1732	0.33	+0.9
1,803,307	-		Synpcc7942_1732	0.34	-1.1
1,803,313	-		Synpcc7942_1732	0.35	+0.7
1,803,318	-		Synpcc7942_1732	0.36	+0.1
1,803,354	+		Synpcc7942_1732	0.45	-1.1
1,803,361	-		Synpcc7942_1732	0.47	-0.1
1,803,371	+		Synpcc7942_1732	0.49	-0.4
1,803,394	+		Synpcc7942_1732	0.55	+1.1
1,803,394	+		Synpcc7942_1732	0.55	+0.3
1,803,394	+		Synpcc7942_1732	0.55	-1.7
1,803,432	+		Synpcc7942_1732	0.64	-0.1
1,803,444	+		Synpcc7942_1732	0.67	+0.5
1,803,451	+				-0.1
1,803,452	-		Synpcc7942_1732	0.69	-0.3
1,803,452	-		Synpcc7942_1732	0.69	-0.1
1,803,453	-		Synpcc7942_1732	0.69	+0.3
1,803,498	+		Synpcc7942_1732	0.80	+0.2
1,803,510	+		Synpcc7942_1732	0.83	-0.7
1,803,510	+		Synpcc7942_1732	0.83	+0.1
1,803,518	-		Synpcc7942_1732	0.85	-1.1
1,803,518	-		Synpcc7942_1732	0.85	-0.0
1,803,518	-		Synpcc7942_1732	0.85	-0.1
1,803,539	+				+1.6
1,803,539	+				-3.6
1,803,539	+				-0.8
1,803,539	+				-0.1
1,803,539	+				+0.9
1,803,547	-				+0.9
1,803,547	-				+1.1
1,803,547	-				-1.1
1,803,566	+				-1.1
1,803,585	+				-1.1
1,803,587	-				+0.8
1,803,606	-				-1.1
1,803,608	+				+1.5
1,803,613	+				-1.7
1,803,640	+	sufR	Synpcc7942_1733	0.10	-1.1
1,803,648	-	sufR	Synpcc7942_1733	0.11	-0.4
1,803,648	-	sufR	Synpcc7942_1733	0.11	-1.1
1,803,648	-	sufR	Synpcc7942_1733	0.11	-0.7
1,803,681	-	sufR	Synpcc7942_1733	0.16	+0.9
1,803,681	-	sufR	Synpcc7942_1733	0.16	-0.1
1,803,731	+	sufR	Synpcc7942_1733	0.24	-2.4
1,803,731	+	sufR	Synpcc7942_1733	0.24	+2.2
1,803,737	-	sufR	Synpcc7942_1733	0.25	-1.7
1,803,737	-	sufR	Synpcc7942_1733	0.25	+0.5
1,803,739	-	sufR	Synpcc7942_1733	0.25	-1.3
1,803,739	-	sufR	Synpcc7942_1733	0.25	-0.7
1,803,760	+	sufR	Synpcc7942_1733	0.29	-0.6
1,803,809	+	sufR	Synpcc7942_1733	0.36	-0.5
1,803,819	+	sufR	Synpcc7942_1733	0.38	-0.7
1,803,856	-	sufR	Synpcc7942_1733	0.44	-0.5
1,803,856	-	sufR	Synpcc7942_1733	0.44	-1.7
1,803,856	-	sufR	Synpcc7942_1733	0.44	-1.0
1,803,872	+	sufR	Synpcc7942_1733	0.46	-1.1
1,803,898	-	sufR	Synpcc7942_1733	0.50	-0.1
1,803,907	-	sufR	Synpcc7942_1733	0.51	-0.9
1,803,908	-	sufR	Synpcc7942_1733	0.52	-0.1
1,803,926	+	sufR	Synpcc7942_1733	0.54	-1.1
1,804,033	+	sufR	Synpcc7942_1733	0.71	-1.1
1,804,034	+	sufR	Synpcc7942_1733	0.71	-0.1
1,804,034	+	sufR	Synpcc7942_1733	0.71	-1.7
1,804,034	+	sufR	Synpcc7942_1733	0.71	-1.1
1,804,034	+	sufR	Synpcc7942_1733	0.71	-0.8
1,804,034	+	sufR	Synpcc7942_1733	0.71	+0.6
1,804,034	+	sufR	Synpcc7942_1733	0.71	-0.9
1,804,034	+	sufR	Synpcc7942_1733	0.71	-1.1
1,804,034	+	sufR	Synpcc7942_1733	0.71	-0.5
1,804,034	+	sufR	Synpcc7942_1733	0.71	-1.7
1,804,034	+	sufR	Synpcc7942_1733	0.71	-0.3
1,804,034	+	sufR	Synpcc7942_1733	0.71	+0.9
1,804,034	+	sufR	Synpcc7942_1733	0.71	-1.1
1,804,034	+	sufR	Synpcc7942_1733	0.71	-2.8
1,804,042	-	sufR	Synpcc7942_1733	0.72	-1.5
1,804,042	-	sufR	Synpcc7942_1733	0.72	-0.1
1,804,042	-	sufR	Synpcc7942_1733	0.72	-0.1
1,804,042	-	sufR	Synpcc7942_1733	0.72	+0.2
1,804,042	-	sufR	Synpcc7942_1733	0.72	-3.6
1,804,042	-	sufR	Synpcc7942_1733	0.72	-0.4
1,804,042	-				+0.3
1,804,042	-	sufR	Synpcc7942_1733	0.72	-0.8
1,804,042	-	sufR	Synpcc7942_1733	0.72	-1.1
1,804,042	-	sufR	Synpcc7942_1733	0.72	-0.8
1,804,042	-	sufR	Synpcc7942_1733	0.72	-2.7
1,804,042	-				-0.1
1,804,073	-	sufR	Synpcc7942_1733	0.77	-0.1
1,804,121	+	sufR	Synpcc7942_1733	0.85	-0.9
1,804,126	+	sufR	Synpcc7942_1733	0.85	-0.8
1,804,141	+	sufR	Synpcc7942_1733	0.88	-0.3
1,804,146	+	sufR	Synpcc7942_1733	0.89	-0.1
1,804,146	+	sufR	Synpcc7942_1733	0.89	+0.9
1,804,149	-	sufR	Synpcc7942_1733	0.89	-0.4
1,804,149	-	sufR	Synpcc7942_1733	0.89	-2.0