Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1680

Experiment: D-Cycloserine 0.015625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.015625 mg/ml
1,746,868	-		Synpcc7942_1678	0.47	-1.3
1,746,975	-		Synpcc7942_1678	0.67	+1.0
1,746,975	-		Synpcc7942_1678	0.67	+0.5
1,747,003	+		Synpcc7942_1678	0.72	+0.7
1,747,011	-		Synpcc7942_1678	0.74	-1.1
1,747,013	+				-1.7
1,747,016	-		Synpcc7942_1678	0.75	+0.5
1,747,021	-		Synpcc7942_1678	0.76	+0.6
1,747,064	+		Synpcc7942_1678	0.83	-1.7
1,747,083	+		Synpcc7942_1678	0.87	+0.5
1,747,083	+		Synpcc7942_1678	0.87	+1.4
1,747,083	+		Synpcc7942_1678	0.87	-1.0
1,747,083	+		Synpcc7942_1678	0.87	-0.3
1,747,083	+		Synpcc7942_1678	0.87	+0.1
1,747,089	-		Synpcc7942_1678	0.88	+1.5
1,747,091	-		Synpcc7942_1678	0.88	+1.2
1,747,103	-				+2.3
1,747,110	+				-0.1
1,747,110	+				+0.5
1,747,110	+				-3.4
1,747,116	+				+1.0
1,747,117	-				-0.4
1,747,118	-				-0.0
1,747,118	-				-0.1
1,747,119	-				+0.7
1,747,124	-				+0.0
1,747,129	-				-0.7
1,747,147	-				-2.9
1,747,147	-				+0.3
1,747,155	+				-2.3
1,747,155	+				+0.0
1,747,155	+				+1.4
1,747,155	+				+1.0
1,747,155	+				+0.1
1,747,155	+				-0.4
1,747,155	+				-0.4
1,747,155	+				-0.5
1,747,155	+				-0.4
1,747,155	+				+1.9
1,747,155	+				-2.1
1,747,155	+				+0.7
1,747,155	+				-1.7
1,747,155	+				+0.6
1,747,155	+				+0.5
1,747,155	+				-1.1
1,747,155	+				+0.3
1,747,155	+				+0.4
1,747,155	+				-0.6
1,747,160	+				-2.4
1,747,162	-				-0.1
1,747,163	-				-0.5
1,747,163	-				+0.1
1,747,163	-				-0.1
1,747,163	-				+1.1
1,747,163	-				+0.7
1,747,163	-				+0.6
1,747,163	-				+1.5
1,747,163	-				+0.3
1,747,163	-				+0.4
1,747,163	-				-0.4
1,747,163	-				-1.1
1,747,163	-				+0.3
1,747,163	-				-0.2
1,747,163	-				-0.9
1,747,163	-				-0.1
1,747,163	-				-0.1
1,747,163	-				+0.1
1,747,163	-				+0.9
1,747,163	-				+0.9
1,747,177	+				+0.4
1,747,201	-				-0.1
1,747,205	-				-0.5
1,747,209	+				-1.4
1,747,228	-				-0.1
1,747,246	+				+0.0
1,747,246	+				-1.7
1,747,317	-	psb28	Synpcc7942_1679	0.19	-1.1
1,747,330	+	psb28	Synpcc7942_1679	0.23	-0.9
1,747,330	+	psb28	Synpcc7942_1679	0.23	+2.1
1,747,356	-	psb28	Synpcc7942_1679	0.31	-1.0
1,747,363	-	psb28	Synpcc7942_1679	0.33	+0.0
1,747,363	-	psb28	Synpcc7942_1679	0.33	-0.5
1,747,365	+	psb28	Synpcc7942_1679	0.33	-1.0
1,747,365	+	psb28	Synpcc7942_1679	0.33	-1.1
1,747,373	-	psb28	Synpcc7942_1679	0.36	-0.9
1,747,373	-	psb28	Synpcc7942_1679	0.36	+1.5
1,747,374	-	psb28	Synpcc7942_1679	0.36	-1.5
1,747,390	+	psb28	Synpcc7942_1679	0.41	-1.3
1,747,413	-	psb28	Synpcc7942_1679	0.47	-1.9
1,747,414	-	psb28	Synpcc7942_1679	0.48	-1.1
1,747,576	-				-1.5
1,747,585	+				+0.3
1,747,585	+				+0.1
1,747,593	+				-0.1
1,747,593	+				-0.1
1,747,593	+				-1.1
1,747,593	-				-1.7
1,747,593	-				+0.6
1,747,593	-				-0.1
1,747,601	-				+0.1
1,747,637	-				-1.1
1,747,660	-				-1.7
1,747,668	+				+1.0
1,747,670	+				-1.3
1,747,717	-				-0.5
1,747,723	-				-0.4
1,747,723	-				-0.7
1,747,723	-				-0.1
1,747,737	+				+1.9
1,747,739	+				+1.2
1,747,739	+				-0.1
1,747,739	+				-0.4
1,747,739	+				-0.3
1,747,741	+				+0.3
1,747,745	-				-0.4
1,747,747	-				-0.4
1,747,747	-				+1.5
1,747,747	-				+0.6
1,747,747	-				+0.9
1,747,747	-				+0.9
1,747,748	+				-0.7
1,747,753	+				-2.7
1,747,756	-				-1.1
1,747,771	-				-0.1
1,747,778	-				+0.9
1,747,785	+				-0.1
1,747,831	+				+0.9
1,747,876	+				-1.7
1,747,975	-	cysA	Synpcc7942_1680	0.13	-2.7
1,748,092	+	cysA	Synpcc7942_1680	0.25	-2.4
1,748,102	+	cysA	Synpcc7942_1680	0.26	-1.7
1,748,106	-	cysA	Synpcc7942_1680	0.26	-3.8
1,748,139	+	cysA	Synpcc7942_1680	0.29	-2.7
1,748,139	+	cysA	Synpcc7942_1680	0.29	-2.1
1,748,227	+	cysA	Synpcc7942_1680	0.38	-1.7
1,748,300	-	cysA	Synpcc7942_1680	0.45	-2.1
1,748,328	-	cysA	Synpcc7942_1680	0.48	-2.4
1,748,409	-	cysA	Synpcc7942_1680	0.56	-1.7
1,748,427	+	cysA	Synpcc7942_1680	0.58	-2.4
1,748,556	-	cysA	Synpcc7942_1680	0.70	-3.6
1,748,558	+				-0.1
1,748,567	-	cysA	Synpcc7942_1680	0.71	-2.9
1,748,588	+	cysA	Synpcc7942_1680	0.73	+0.9
1,748,590	+	cysA	Synpcc7942_1680	0.74	-0.7
1,748,596	+	cysA	Synpcc7942_1680	0.74	-1.1
1,748,596	+	cysA	Synpcc7942_1680	0.74	-2.7
1,748,598	+	cysA	Synpcc7942_1680	0.74	-2.4
1,748,606	+	cysA	Synpcc7942_1680	0.75	-3.9
1,748,608	+	cysA	Synpcc7942_1680	0.75	-1.1
1,748,700	-				-1.1
1,748,711	-	cysA	Synpcc7942_1680	0.85	-1.7
1,748,762	-				-2.0
1,748,794	+				-2.4
1,748,860	+				-1.1
1,748,860	+				-2.9
1,748,860	+				-1.7
1,748,860	+				-1.3
1,748,860	+				-1.7
1,748,868	-				-1.1
1,748,868	-				-3.7
1,748,868	-				-3.6
1,748,890	-				-1.1
1,748,953	+				+0.6
1,748,961	-				+2.7
1,748,966	-				-0.1
1,749,026	+				-1.7
1,749,027	-				+0.9
1,749,034	-				+0.5
1,749,034	-				-0.5
1,749,034	-				-0.1
1,749,037	+				+1.6
1,749,045	-				+0.8
1,749,083	-				-0.1
1,749,083	-				+2.0
1,749,085	+				+0.1
1,749,118	+				+0.1
1,749,137	-				+1.0
1,749,211	+	sbpA	Synpcc7942_1681	0.13	-1.7
1,749,221	-	sbpA	Synpcc7942_1681	0.14	+1.3
1,749,235	-	sbpA	Synpcc7942_1681	0.15	+1.3
1,749,354	-	sbpA	Synpcc7942_1681	0.26	-2.3
1,749,427	-	sbpA	Synpcc7942_1681	0.33	-2.1
1,749,481	-	sbpA	Synpcc7942_1681	0.38	-0.3
1,749,522	+	sbpA	Synpcc7942_1681	0.42	-0.3
1,749,532	+	sbpA	Synpcc7942_1681	0.43	-0.3
1,749,550	-	sbpA	Synpcc7942_1681	0.45	-1.1
1,749,610	+	sbpA	Synpcc7942_1681	0.51	+1.1
1,749,616	-	sbpA	Synpcc7942_1681	0.51	+0.5
1,749,618	-	sbpA	Synpcc7942_1681	0.51	-0.9
1,749,628	-	sbpA	Synpcc7942_1681	0.52	+0.5
1,749,673	-	sbpA	Synpcc7942_1681	0.57	+0.5
1,749,683	-	sbpA	Synpcc7942_1681	0.58	-0.9
1,749,693	-	sbpA	Synpcc7942_1681	0.59	-0.8
1,749,786	+	sbpA	Synpcc7942_1681	0.67	+1.7
1,749,835	+	sbpA	Synpcc7942_1681	0.72	-0.0
1,749,850	-	sbpA	Synpcc7942_1681	0.74	-0.1