Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1602

Experiment: D-Cycloserine 0.015625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.015625 mg/ml
1,666,357	+		Synpcc7942_1600	0.20	-1.4
1,666,357	+		Synpcc7942_1600	0.20	-1.9
1,666,365	-		Synpcc7942_1600	0.21	+2.5
1,666,459	+		Synpcc7942_1600	0.32	-1.8
1,666,467	-		Synpcc7942_1600	0.33	-0.1
1,666,484	+		Synpcc7942_1600	0.35	+0.9
1,666,499	-		Synpcc7942_1600	0.37	+0.1
1,666,499	-		Synpcc7942_1600	0.37	+0.9
1,666,510	-		Synpcc7942_1600	0.38	+0.7
1,666,566	-		Synpcc7942_1600	0.45	-0.1
1,666,601	+		Synpcc7942_1600	0.49	+0.7
1,666,601	+		Synpcc7942_1600	0.49	-1.9
1,666,613	+		Synpcc7942_1600	0.50	-2.1
1,666,613	+		Synpcc7942_1600	0.50	+0.1
1,666,640	-		Synpcc7942_1600	0.54	-2.1
1,666,643	+		Synpcc7942_1600	0.54	-1.1
1,666,663	-		Synpcc7942_1600	0.56	-0.1
1,666,664	-		Synpcc7942_1600	0.56	-0.1
1,666,665	-		Synpcc7942_1600	0.57	-1.1
1,666,895	-		Synpcc7942_1600	0.84	+1.5
1,666,946	+				-2.4
1,666,946	+				-1.9
1,666,983	+				+0.3
1,667,015	-				-0.1
1,667,026	+				+0.9
1,667,094	-		Synpcc7942_1601	0.21	+0.4
1,667,116	+		Synpcc7942_1601	0.33	-0.8
1,667,121	+		Synpcc7942_1601	0.36	+2.5
1,667,129	+		Synpcc7942_1601	0.41	+1.5
1,667,140	-		Synpcc7942_1601	0.47	-0.3
1,667,152	-		Synpcc7942_1601	0.54	+1.0
1,667,166	+		Synpcc7942_1601	0.62	+0.1
1,667,215	+				+0.8
1,667,220	+				+1.2
1,667,223	-				+0.3
1,667,223	-				+0.9
1,667,223	-				+0.9
1,667,292	+				-0.4
1,667,408	+		Synpcc7942_1602	0.15	-0.5
1,667,423	-		Synpcc7942_1602	0.17	-3.2
1,667,515	-		Synpcc7942_1602	0.30	-2.9
1,667,567	+		Synpcc7942_1602	0.37	-1.7
1,667,608	+		Synpcc7942_1602	0.42	-1.1
1,667,608	+		Synpcc7942_1602	0.42	-3.4
1,667,657	+		Synpcc7942_1602	0.49	-1.9
1,667,667	+		Synpcc7942_1602	0.50	-0.6
1,667,670	+		Synpcc7942_1602	0.51	-1.9
1,667,672	+		Synpcc7942_1602	0.51	-2.9
1,667,672	+		Synpcc7942_1602	0.51	-2.7
1,667,672	+		Synpcc7942_1602	0.51	-1.2
1,667,694	+		Synpcc7942_1602	0.54	-1.7
1,667,695	+		Synpcc7942_1602	0.54	-2.1
1,667,719	-		Synpcc7942_1602	0.57	-1.3
1,667,731	-		Synpcc7942_1602	0.59	-1.1
1,667,779	-		Synpcc7942_1602	0.65	+0.1
1,667,830	+		Synpcc7942_1602	0.72	-3.1
1,667,838	-		Synpcc7942_1602	0.73	-1.0
1,667,844	-		Synpcc7942_1602	0.74	-2.9
1,667,858	-		Synpcc7942_1602	0.76	-0.1
1,667,894	-		Synpcc7942_1602	0.81	-1.7
1,667,898	-		Synpcc7942_1602	0.82	-1.1
1,667,934	+		Synpcc7942_1602	0.86	-2.9
1,667,936	+		Synpcc7942_1602	0.87	-1.5
1,667,962	+				+1.3
1,667,970	-				-0.5
1,668,063	+				-1.9
1,668,077	+				-0.4
1,668,085	-				-0.1
1,668,086	+				+0.9
1,668,086	+				+0.9
1,668,086	+				-1.9
1,668,104	+				+0.3
1,668,104	-				-1.1
1,668,120	+				-0.1
1,668,132	+				-1.1
1,668,132	+				-1.1
1,668,140	-				+1.9
1,668,140	-				-1.1
1,668,183	+				-0.7
1,668,191	-				-1.1
1,668,197	-				-0.5
1,668,197	-				-2.4
1,668,233	-				-2.4
1,668,233	-				-1.1
1,668,233	-				-0.7
1,668,233	-				-0.1
1,668,426	+	ampC	Synpcc7942_1603	0.26	-0.7
1,668,426	+	ampC	Synpcc7942_1603	0.26	-0.5
1,668,493	-	ampC	Synpcc7942_1603	0.32	-2.1
1,668,517	-	ampC	Synpcc7942_1603	0.34	-3.1
1,668,542	-	ampC	Synpcc7942_1603	0.36	-0.7
1,668,568	+	ampC	Synpcc7942_1603	0.38	-0.5
1,668,577	-	ampC	Synpcc7942_1603	0.39	-0.7
1,668,618	+	ampC	Synpcc7942_1603	0.43	-0.1
1,668,618	+	ampC	Synpcc7942_1603	0.43	-1.1
1,668,618	+	ampC	Synpcc7942_1603	0.43	-1.3
1,668,621	-	ampC	Synpcc7942_1603	0.43	-1.7
1,668,626	-	ampC	Synpcc7942_1603	0.43	-1.1
1,668,626	-	ampC	Synpcc7942_1603	0.43	-1.7
1,668,651	+	ampC	Synpcc7942_1603	0.46	-0.4
1,668,658	-	ampC	Synpcc7942_1603	0.46	-0.4
1,668,664	+	ampC	Synpcc7942_1603	0.47	-2.1
1,668,665	+	ampC	Synpcc7942_1603	0.47	-2.9
1,668,675	+	ampC	Synpcc7942_1603	0.48	-0.9
1,668,708	+	ampC	Synpcc7942_1603	0.51	-1.8
1,668,711	-	ampC	Synpcc7942_1603	0.51	-1.1
1,668,716	-	ampC	Synpcc7942_1603	0.51	+0.2
1,668,736	+	ampC	Synpcc7942_1603	0.53	-1.1
1,668,744	-	ampC	Synpcc7942_1603	0.54	-0.7
1,668,744	-	ampC	Synpcc7942_1603	0.54	-1.2
1,668,803	+	ampC	Synpcc7942_1603	0.59	-2.7
1,668,869	+	ampC	Synpcc7942_1603	0.65	-0.1
1,668,902	+	ampC	Synpcc7942_1603	0.68	-2.1
1,668,902	+	ampC	Synpcc7942_1603	0.68	-3.4
1,668,910	-	ampC	Synpcc7942_1603	0.69	-0.7
1,668,910	-	ampC	Synpcc7942_1603	0.69	-1.4
1,668,947	-	ampC	Synpcc7942_1603	0.72	+2.1
1,668,953	-	ampC	Synpcc7942_1603	0.72	+0.6
1,668,994	+	ampC	Synpcc7942_1603	0.76	+0.9
1,669,011	-	ampC	Synpcc7942_1603	0.78	-3.5
1,669,016	-	ampC	Synpcc7942_1603	0.78	-0.7
1,669,018	-	ampC	Synpcc7942_1603	0.78	-2.2
1,669,018	-	ampC	Synpcc7942_1603	0.78	-1.4
1,669,018	-	ampC	Synpcc7942_1603	0.78	+0.2
1,669,020	+				+0.9
1,669,025	+	ampC	Synpcc7942_1603	0.79	-1.6
1,669,025	+	ampC	Synpcc7942_1603	0.79	-0.1
1,669,025	+	ampC	Synpcc7942_1603	0.79	+0.8
1,669,025	+	ampC	Synpcc7942_1603	0.79	-1.6
1,669,025	+	ampC	Synpcc7942_1603	0.79	+0.7
1,669,025	+	ampC	Synpcc7942_1603	0.79	-2.1
1,669,025	+	ampC	Synpcc7942_1603	0.79	-1.1
1,669,033	-	ampC	Synpcc7942_1603	0.80	-0.2