Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1475

Experiment: D-Cycloserine 0.015625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.015625 mg/ml
1,524,843	-	ndhD5	Synpcc7942_1473	0.83	-0.9
1,524,860	-	ndhD5	Synpcc7942_1473	0.85	-3.2
1,524,903	-	ndhD5	Synpcc7942_1473	0.88	-1.6
1,524,977	-				-2.8
1,524,999	-				-0.4
1,525,083	-				+2.7
1,525,159	-		Synpcc7942_1474	0.24	-1.1
1,525,273	-		Synpcc7942_1474	0.58	-2.4
1,525,396	+				-2.3
1,525,767	+				-0.3
1,525,767	+				+0.7
1,525,804	+				+1.3
1,525,812	-				-2.4
1,525,934	-				-1.1
1,525,935	-				-1.8
1,526,020	-	sbtA	Synpcc7942_1475	0.17	-2.8
1,526,052	+	sbtA	Synpcc7942_1475	0.20	-2.9
1,526,114	-	sbtA	Synpcc7942_1475	0.25	-3.6
1,526,118	+	sbtA	Synpcc7942_1475	0.25	-2.4
1,526,128	+	sbtA	Synpcc7942_1475	0.26	-2.4
1,526,128	+	sbtA	Synpcc7942_1475	0.26	-1.1
1,526,128	+	sbtA	Synpcc7942_1475	0.26	-1.4
1,526,136	-	sbtA	Synpcc7942_1475	0.27	-3.2
1,526,293	-	sbtA	Synpcc7942_1475	0.41	-2.1
1,526,293	-	sbtA	Synpcc7942_1475	0.41	+0.5
1,526,338	+	sbtA	Synpcc7942_1475	0.45	-1.1
1,526,344	+	sbtA	Synpcc7942_1475	0.46	-2.4
1,526,346	+	sbtA	Synpcc7942_1475	0.46	-0.1
1,526,390	+	sbtA	Synpcc7942_1475	0.50	-3.1
1,526,425	+	sbtA	Synpcc7942_1475	0.53	-2.9
1,526,479	+	sbtA	Synpcc7942_1475	0.58	-3.9
1,526,584	-	sbtA	Synpcc7942_1475	0.67	-0.1
1,526,594	-	sbtA	Synpcc7942_1475	0.68	-2.4
1,526,594	-	sbtA	Synpcc7942_1475	0.68	-2.6
1,526,628	-	sbtA	Synpcc7942_1475	0.71	-3.2
1,526,656	+	sbtA	Synpcc7942_1475	0.73	-3.1
1,526,664	-	sbtA	Synpcc7942_1475	0.74	-2.6
1,526,737	+	sbtA	Synpcc7942_1475	0.81	-0.3
1,527,134	+				-4.3
1,527,383	-				-1.6
1,527,383	-				-0.1
1,527,395	+				+1.2
1,527,428	-				+0.4
1,527,438	-				+0.7
1,527,438	-				+1.0
1,527,438	-				-0.1
1,527,438	-				-0.1
1,527,463	+				+0.1
1,527,528	-				+0.7
1,527,534	+				-0.8
1,527,592	+				+1.9
1,527,610	+				-0.2
1,527,626	+				-0.1
1,527,746	-				-1.9
1,527,806	+		Synpcc7942_1476	0.28	-0.7
1,527,807	+		Synpcc7942_1476	0.29	-1.8
1,527,814	-		Synpcc7942_1476	0.31	-0.3
1,527,814	-		Synpcc7942_1476	0.31	-1.9
1,527,826	-		Synpcc7942_1476	0.35	-0.1
1,527,849	-		Synpcc7942_1476	0.42	-0.7
1,527,856	+		Synpcc7942_1476	0.44	+0.7
1,527,856	+		Synpcc7942_1476	0.44	+0.4
1,527,881	+		Synpcc7942_1476	0.52	-0.7