Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1448
Experiment: D-Cycloserine 0.015625 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | D-Cycloserine 0.015625 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,500,351 | + | +2.3 | |||
1,500,351 | + | +0.7 | |||
1,500,359 | - | +0.5 | |||
1,500,359 | - | -0.1 | |||
1,500,359 | - | -1.1 | |||
1,500,359 | - | +0.7 | |||
1,500,363 | + | -0.1 | |||
1,500,369 | + | -0.0 | |||
1,500,370 | - | -0.1 | |||
1,500,392 | - | +1.0 | |||
1,500,402 | - | +0.4 | |||
1,500,456 | + | -0.4 | |||
1,500,469 | - | +1.5 | |||
1,500,471 | + | -1.1 | |||
1,501,317 | + | -1.1 | |||
1,501,326 | - | +0.5 | |||
1,501,337 | - | -2.9 | |||
1,501,653 | - | nadA | Synpcc7942_1448 | 0.32 | -1.6 |
1,501,726 | + | nadA | Synpcc7942_1448 | 0.40 | -1.8 |
1,501,726 | + | nadA | Synpcc7942_1448 | 0.40 | -2.2 |
1,501,903 | - | nadA | Synpcc7942_1448 | 0.58 | -1.6 |
1,501,974 | - | nadA | Synpcc7942_1448 | 0.66 | -1.6 |
1,502,026 | + | nadA | Synpcc7942_1448 | 0.71 | -1.1 |
1,502,074 | - | nadA | Synpcc7942_1448 | 0.76 | -0.8 |
1,502,130 | - | nadA | Synpcc7942_1448 | 0.82 | -1.9 |
1,502,138 | + | nadA | Synpcc7942_1448 | 0.83 | -2.6 |
1,502,157 | + | nadA | Synpcc7942_1448 | 0.85 | -1.6 |
1,502,290 | + | +0.4 | |||
1,502,305 | + | +0.3 | |||
1,502,314 | - | -0.5 | |||
1,502,324 | + | +1.9 | |||
1,502,332 | - | -0.1 |
Or see this region's nucleotide sequence