Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1303

Experiment: D-Cycloserine 0.015625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.015625 mg/ml
1,329,757	+	recQ	Synpcc7942_1301	0.74	+0.3
1,329,765	-	recQ	Synpcc7942_1301	0.74	-1.7
1,329,768	+	recQ	Synpcc7942_1301	0.74	+1.5
1,329,776	-	recQ	Synpcc7942_1301	0.75	+0.2
1,329,801	+	recQ	Synpcc7942_1301	0.77	-1.7
1,329,844	-				+0.5
1,329,889	-	recQ	Synpcc7942_1301	0.83	-1.1
1,329,904	+	recQ	Synpcc7942_1301	0.84	-1.1
1,329,904	+	recQ	Synpcc7942_1301	0.84	+1.4
1,329,912	-	recQ	Synpcc7942_1301	0.84	-0.1
1,329,930	+	recQ	Synpcc7942_1301	0.86	-0.1
1,329,938	-	recQ	Synpcc7942_1301	0.86	+1.5
1,329,956	-	recQ	Synpcc7942_1301	0.87	-1.2
1,329,993	+	recQ	Synpcc7942_1301	0.90	+0.0
1,330,013	-				+1.7
1,330,098	-				+0.3
1,330,098	-				+0.0
1,330,098	-				-1.4
1,330,104	+				+1.7
1,330,112	-				-2.4
1,330,112	-				+0.8
1,330,136	+				+0.2
1,330,145	+				-0.7
1,330,159	+				-0.7
1,330,159	+				-2.7
1,330,159	+				+0.6
1,330,164	+				+1.5
1,330,167	-				-0.4
1,330,169	-				+0.2
1,330,180	+				-0.6
1,330,211	-				-2.7
1,330,222	-				+1.5
1,330,283	-				-0.1
1,330,382	+		Synpcc7942_1302	0.28	+0.1
1,330,431	-		Synpcc7942_1302	0.38	-0.4
1,330,441	-		Synpcc7942_1302	0.40	-0.5
1,330,449	-		Synpcc7942_1302	0.42	+0.3
1,330,470	+		Synpcc7942_1302	0.46	-1.1
1,330,475	+		Synpcc7942_1302	0.47	-0.7
1,330,478	-		Synpcc7942_1302	0.48	-0.7
1,330,483	-		Synpcc7942_1302	0.49	+0.0
1,330,523	+		Synpcc7942_1302	0.57	-1.1
1,330,543	-		Synpcc7942_1302	0.61	-0.2
1,330,687	+				-0.1
1,330,703	-				-0.1
1,330,703	-				+0.4
1,330,713	+				+0.3
1,330,744	+				+0.4
1,330,752	-				+0.3
1,330,752	-				+1.5
1,330,754	+				+1.7
1,330,762	+				-0.4
1,330,764	+				-2.1
1,330,764	+				-0.4
1,330,764	+				+0.3
1,330,772	-				+0.9
1,330,774	+				+1.3
1,330,774	+				-0.1
1,330,780	-				-0.1
1,330,812	-		Synpcc7942_1303	0.15	-1.9
1,330,828	+		Synpcc7942_1303	0.19	-2.4
1,330,833	+		Synpcc7942_1303	0.20	+0.5
1,330,836	-		Synpcc7942_1303	0.21	+0.1
1,330,842	+		Synpcc7942_1303	0.23	+0.3
1,330,860	-		Synpcc7942_1303	0.27	+0.3
1,330,872	-		Synpcc7942_1303	0.30	-1.4
1,330,878	-				-1.7
1,330,878	-		Synpcc7942_1303	0.32	-2.1
1,330,950	-		Synpcc7942_1303	0.50	-1.7
1,330,996	-		Synpcc7942_1303	0.61	-3.5
1,331,065	+		Synpcc7942_1303	0.78	-0.1
1,331,065	+		Synpcc7942_1303	0.78	-2.2
1,331,075	+		Synpcc7942_1303	0.81	-4.5
1,331,097	+		Synpcc7942_1303	0.86	-2.9
1,331,105	-		Synpcc7942_1303	0.88	-4.2
1,331,135	-				-2.7
1,331,152	+				-0.5
1,331,160	-				+0.0
1,331,166	+				-0.8
1,331,226	+		Synpcc7942_1304	0.12	-0.1
1,331,234	-		Synpcc7942_1304	0.13	-1.4
1,331,234	-		Synpcc7942_1304	0.13	+0.2
1,331,234	-		Synpcc7942_1304	0.13	+0.4
1,331,234	-		Synpcc7942_1304	0.13	-0.2
1,331,234	-		Synpcc7942_1304	0.13	-1.4
1,331,234	-		Synpcc7942_1304	0.13	-0.7
1,331,240	+		Synpcc7942_1304	0.14	-1.0
1,331,269	-		Synpcc7942_1304	0.19	-0.2
1,331,280	+		Synpcc7942_1304	0.21	+0.5
1,331,324	+		Synpcc7942_1304	0.29	+2.5
1,331,324	+		Synpcc7942_1304	0.29	+0.5
1,331,332	-		Synpcc7942_1304	0.30	-1.1
1,331,342	-		Synpcc7942_1304	0.32	-0.1
1,331,358	-		Synpcc7942_1304	0.35	+0.2
1,331,389	-		Synpcc7942_1304	0.40	-0.7
1,331,595	-				-0.1
1,331,621	+		Synpcc7942_1304	0.80	+0.2
1,331,621	+		Synpcc7942_1304	0.80	+0.2
1,331,626	+		Synpcc7942_1304	0.81	-0.4
1,331,629	-		Synpcc7942_1304	0.82	+1.3
1,331,629	-		Synpcc7942_1304	0.82	-0.1
1,331,685	+				+1.0
1,331,707	+				-1.9
1,331,715	-				+0.5
1,331,734	+				+1.4
1,331,758	+				-0.3
1,331,766	-				+0.5
1,331,774	+				-0.4
1,331,786	-				-0.4
1,331,796	-				-0.6
1,331,820	-				-1.7
1,331,901	+				-0.8
1,331,906	+				-1.2
1,331,906	+				-2.7
1,331,914	-				-0.8
1,331,922	-				-0.1
1,331,945	+				-3.7
1,331,982	+				-4.9
1,331,983	+				-3.2
1,331,989	+				-3.7
1,331,990	-				-1.2
1,331,997	-		Synpcc7942_1305	0.10	-3.2
1,331,997	-		Synpcc7942_1305	0.10	-4.1
1,332,015	+		Synpcc7942_1305	0.11	-2.1
1,332,028	+		Synpcc7942_1305	0.12	-2.7
1,332,059	+		Synpcc7942_1305	0.14	-2.1
1,332,059	+		Synpcc7942_1305	0.14	-2.4
1,332,059	+		Synpcc7942_1305	0.14	-3.4
1,332,067	-		Synpcc7942_1305	0.14	-3.7
1,332,072	-		Synpcc7942_1305	0.15	-3.9
1,332,076	+		Synpcc7942_1305	0.15	-1.1
1,332,086	+		Synpcc7942_1305	0.16	-1.4
1,332,099	-		Synpcc7942_1305	0.16	-2.1
1,332,116	-		Synpcc7942_1305	0.18	-1.1
1,332,116	-		Synpcc7942_1305	0.18	+0.5
1,332,117	+		Synpcc7942_1305	0.18	-2.8
1,332,117	-		Synpcc7942_1305	0.18	-4.2
1,332,127	-		Synpcc7942_1305	0.18	-2.7
1,332,149	+		Synpcc7942_1305	0.20	-2.1