Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1289

Experiment: D-Cycloserine 0.015625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.015625 mg/ml
1,310,961	+				-1.4
1,310,969	-				-0.1
1,311,018	-				-0.8
1,311,061	+				+1.5
1,311,093	+		Synpcc7942_1288	0.13	-1.7
1,311,096	-		Synpcc7942_1288	0.13	-0.1
1,311,110	+		Synpcc7942_1288	0.16	-0.5
1,311,118	-		Synpcc7942_1288	0.18	+1.9
1,311,177	+		Synpcc7942_1288	0.29	-1.1
1,311,186	+		Synpcc7942_1288	0.31	+0.4
1,311,201	+		Synpcc7942_1288	0.34	+0.1
1,311,239	+		Synpcc7942_1288	0.42	+0.8
1,311,247	-		Synpcc7942_1288	0.43	-0.2
1,311,300	-		Synpcc7942_1288	0.54	+1.5
1,311,322	-		Synpcc7942_1288	0.58	-0.3
1,311,351	+		Synpcc7942_1288	0.64	+0.8
1,311,400	-		Synpcc7942_1288	0.73	-2.1
1,311,409	+		Synpcc7942_1288	0.75	+3.4
1,311,440	+		Synpcc7942_1288	0.81	-3.7
1,311,476	+		Synpcc7942_1288	0.88	-1.1
1,311,477	-		Synpcc7942_1288	0.89	+0.3
1,311,486	+				+0.9
1,311,513	-				+0.2
1,311,734	+				-0.3
1,311,744	-				-0.1
1,311,795	+				-0.6
1,311,845	-				-1.1
1,311,846	-				+0.2
1,311,852	-				+3.2
1,311,852	-				+0.7
1,311,876	+				-2.4
1,311,894	-				-2.1
1,311,904	+				-2.9
1,311,912	-				-2.7
1,311,912	-				-0.6
1,311,916	+				-1.7
1,311,918	+				-0.0
1,311,951	+				-2.2
1,311,965	+				-2.4
1,311,965	+				-3.4
1,311,973	-				-1.9
1,311,973	-				-2.9
1,311,975	+	pmbA	Synpcc7942_1289	0.10	-3.4
1,311,983	-	pmbA	Synpcc7942_1289	0.11	-1.7
1,311,990	+	pmbA	Synpcc7942_1289	0.11	-0.1
1,312,032	+	pmbA	Synpcc7942_1289	0.14	-3.4
1,312,040	-	pmbA	Synpcc7942_1289	0.15	-2.2
1,312,151	+	pmbA	Synpcc7942_1289	0.23	-0.1
1,312,191	+	pmbA	Synpcc7942_1289	0.26	-2.0
1,312,227	-	pmbA	Synpcc7942_1289	0.29	-2.5
1,312,237	-	pmbA	Synpcc7942_1289	0.30	-1.8
1,312,283	-	pmbA	Synpcc7942_1289	0.33	-0.1
1,312,310	+	pmbA	Synpcc7942_1289	0.35	-1.7
1,312,325	+	pmbA	Synpcc7942_1289	0.36	-2.1
1,312,377	-	pmbA	Synpcc7942_1289	0.40	-3.7
1,312,412	+	pmbA	Synpcc7942_1289	0.43	-1.1
1,312,412	+	pmbA	Synpcc7942_1289	0.43	-1.9
1,312,412	+	pmbA	Synpcc7942_1289	0.43	-0.1
1,312,420	-	pmbA	Synpcc7942_1289	0.43	-1.1
1,312,420	-	pmbA	Synpcc7942_1289	0.43	-0.5
1,312,472	-	pmbA	Synpcc7942_1289	0.47	-0.1
1,312,520	+	pmbA	Synpcc7942_1289	0.51	-1.1
1,312,520	+	pmbA	Synpcc7942_1289	0.51	-2.7
1,312,533	-	pmbA	Synpcc7942_1289	0.52	-1.5
1,312,602	+	pmbA	Synpcc7942_1289	0.57	+0.7
1,312,610	-	pmbA	Synpcc7942_1289	0.57	-1.3
1,312,610	-	pmbA	Synpcc7942_1289	0.57	-0.1
1,312,623	-	pmbA	Synpcc7942_1289	0.58	-3.7
1,312,654	-	pmbA	Synpcc7942_1289	0.61	+0.4
1,312,668	+	pmbA	Synpcc7942_1289	0.62	-1.7
1,312,676	-	pmbA	Synpcc7942_1289	0.62	-0.9
1,312,696	-	pmbA	Synpcc7942_1289	0.64	-2.4
1,312,706	-	pmbA	Synpcc7942_1289	0.65	+1.7
1,312,793	+	pmbA	Synpcc7942_1289	0.71	-2.3
1,312,801	-	pmbA	Synpcc7942_1289	0.72	-1.1
1,312,825	-	pmbA	Synpcc7942_1289	0.73	-2.7
1,312,881	+	pmbA	Synpcc7942_1289	0.78	-1.5
1,312,914	-	pmbA	Synpcc7942_1289	0.80	-1.1
1,312,925	-	pmbA	Synpcc7942_1289	0.81	+0.8
1,312,928	+	pmbA	Synpcc7942_1289	0.81	-1.1
1,312,962	+	pmbA	Synpcc7942_1289	0.84	-1.7
1,312,970	-	pmbA	Synpcc7942_1289	0.84	-1.1
1,313,080	+				-1.6
1,313,085	+				-1.5
1,313,118	+				-3.5
1,313,126	-				-2.7
1,313,151	+				-1.7
1,313,182	+				-0.2
1,313,182	+				-0.7
1,313,184	+				-0.3
1,313,185	+				+3.1
1,313,185	+				+0.9
1,313,193	-				-0.4
1,313,193	-				-0.1
1,313,193	-				-0.1
1,313,193	-				-0.2
1,313,198	+				+0.6
1,313,206	-				+0.9
1,313,230	+				+0.6
1,313,252	-				-0.7
1,313,291	-				+0.8
1,313,356	+	smtA	Synpcc7942_1290	0.39	-0.8
1,313,366	+	smtA	Synpcc7942_1290	0.44	+0.0
1,313,370	+	smtA	Synpcc7942_1290	0.47	-0.1
1,313,371	+	smtA	Synpcc7942_1290	0.47	-0.7
1,313,416	-				+3.1
1,313,424	+	smtA	Synpcc7942_1290	0.78	-2.1
1,313,440	+	smtA	Synpcc7942_1290	0.88	-1.4
1,313,455	+				+0.3
1,313,457	-				+0.9
1,313,563	+				+0.3
1,313,586	+				+0.0
1,313,589	-				+0.2
1,313,594	+				+0.3
1,313,625	+	smtB	Synpcc7942_1291	0.17	+0.7
1,313,665	-	smtB	Synpcc7942_1291	0.28	-0.5
1,313,684	+	smtB	Synpcc7942_1291	0.33	-1.1
1,313,692	-	smtB	Synpcc7942_1291	0.36	-2.0
1,313,716	+	smtB	Synpcc7942_1291	0.42	+1.0
1,313,716	+	smtB	Synpcc7942_1291	0.42	-0.3
1,313,716	+	smtB	Synpcc7942_1291	0.42	+0.2
1,313,716	+	smtB	Synpcc7942_1291	0.42	-1.2
1,313,737	+	smtB	Synpcc7942_1291	0.48	-0.8
1,313,740	+	smtB	Synpcc7942_1291	0.49	-1.8
1,313,750	-	smtB	Synpcc7942_1291	0.51	+0.3
1,313,761	+	smtB	Synpcc7942_1291	0.54	-1.5
1,313,763	+	smtB	Synpcc7942_1291	0.55	-0.8
1,313,814	+	smtB	Synpcc7942_1291	0.69	-0.1
1,313,852	+	smtB	Synpcc7942_1291	0.79	-0.7
1,313,852	+	smtB	Synpcc7942_1291	0.79	+1.3
1,313,857	+	smtB	Synpcc7942_1291	0.80	-0.6
1,313,860	-	smtB	Synpcc7942_1291	0.81	+0.1
1,313,878	-	smtB	Synpcc7942_1291	0.86	-0.9
1,313,936	+				-1.1
1,313,937	+				+2.6
1,313,977	+				-1.4
1,313,977	+				+0.1
1,313,979	+				-0.3
1,313,984	+				-0.3
1,313,985	-				+0.5
1,314,002	-				+0.0
1,314,007	-				-2.1