Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1173

Experiment: D-Cycloserine 0.015625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.015625 mg/ml
1,206,869	+	lnt	Synpcc7942_1172	0.50	-0.8
1,206,875	+	lnt	Synpcc7942_1172	0.50	+0.3
1,206,885	+	lnt	Synpcc7942_1172	0.51	-1.1
1,206,903	-	lnt	Synpcc7942_1172	0.52	-0.3
1,206,903	-	lnt	Synpcc7942_1172	0.52	-0.3
1,206,903	-	lnt	Synpcc7942_1172	0.52	-0.8
1,206,903	-	lnt	Synpcc7942_1172	0.52	+1.5
1,206,903	-	lnt	Synpcc7942_1172	0.52	+1.3
1,206,903	-	lnt	Synpcc7942_1172	0.52	+0.5
1,206,930	+	lnt	Synpcc7942_1172	0.54	-0.3
1,206,941	+	lnt	Synpcc7942_1172	0.55	+0.4
1,206,964	+	lnt	Synpcc7942_1172	0.56	-1.4
1,206,964	+	lnt	Synpcc7942_1172	0.56	-1.9
1,206,972	-	lnt	Synpcc7942_1172	0.57	+0.9
1,206,972	-	lnt	Synpcc7942_1172	0.57	+1.4
1,206,977	-	lnt	Synpcc7942_1172	0.57	+1.2
1,207,009	+	lnt	Synpcc7942_1172	0.59	-2.4
1,207,017	-	lnt	Synpcc7942_1172	0.60	-1.6
1,207,017	-	lnt	Synpcc7942_1172	0.60	+0.3
1,207,017	-	lnt	Synpcc7942_1172	0.60	+1.1
1,207,053	-	lnt	Synpcc7942_1172	0.62	+0.7
1,207,066	+	lnt	Synpcc7942_1172	0.63	-1.8
1,207,097	+	lnt	Synpcc7942_1172	0.65	+0.5
1,207,100	-	lnt	Synpcc7942_1172	0.66	-2.7
1,207,105	-	lnt	Synpcc7942_1172	0.66	-1.2
1,207,110	-	lnt	Synpcc7942_1172	0.66	-0.9
1,207,125	+	lnt	Synpcc7942_1172	0.67	-2.1
1,207,134	+	lnt	Synpcc7942_1172	0.68	+2.2
1,207,135	+	lnt	Synpcc7942_1172	0.68	+0.9
1,207,136	+	lnt	Synpcc7942_1172	0.68	-0.4
1,207,151	-	lnt	Synpcc7942_1172	0.69	+0.9
1,207,153	+	lnt	Synpcc7942_1172	0.69	-0.3
1,207,163	+	lnt	Synpcc7942_1172	0.70	+0.5
1,207,166	-	lnt	Synpcc7942_1172	0.70	-1.1
1,207,166	-	lnt	Synpcc7942_1172	0.70	+1.8
1,207,171	-	lnt	Synpcc7942_1172	0.71	+0.5
1,207,171	-	lnt	Synpcc7942_1172	0.71	-0.7
1,207,176	+	lnt	Synpcc7942_1172	0.71	-3.2
1,207,191	+	lnt	Synpcc7942_1172	0.72	-1.1
1,207,191	+	lnt	Synpcc7942_1172	0.72	-0.0
1,207,199	-	lnt	Synpcc7942_1172	0.73	+0.9
1,207,203	+	lnt	Synpcc7942_1172	0.73	-1.0
1,207,203	+	lnt	Synpcc7942_1172	0.73	-1.9
1,207,203	+	lnt	Synpcc7942_1172	0.73	-1.1
1,207,203	+	lnt	Synpcc7942_1172	0.73	-1.7
1,207,211	-	lnt	Synpcc7942_1172	0.73	-2.7
1,207,211	-	lnt	Synpcc7942_1172	0.73	-0.1
1,207,211	-	lnt	Synpcc7942_1172	0.73	-1.5
1,207,212	-	lnt	Synpcc7942_1172	0.73	-1.9
1,207,223	+	lnt	Synpcc7942_1172	0.74	-1.1
1,207,244	-	lnt	Synpcc7942_1172	0.76	-1.4
1,207,258	-	lnt	Synpcc7942_1172	0.77	-2.7
1,207,263	+	lnt	Synpcc7942_1172	0.77	-2.1
1,207,263	+	lnt	Synpcc7942_1172	0.77	+0.8
1,207,281	+	lnt	Synpcc7942_1172	0.78	-0.7
1,207,281	+	lnt	Synpcc7942_1172	0.78	-1.1
1,207,294	+	lnt	Synpcc7942_1172	0.79	+0.5
1,207,295	-	lnt	Synpcc7942_1172	0.79	-1.3
1,207,306	+	lnt	Synpcc7942_1172	0.80	-1.8
1,207,306	+	lnt	Synpcc7942_1172	0.80	-0.7
1,207,316	+	lnt	Synpcc7942_1172	0.81	-1.3
1,207,316	+	lnt	Synpcc7942_1172	0.81	-1.1
1,207,316	+	lnt	Synpcc7942_1172	0.81	+1.4
1,207,316	+	lnt	Synpcc7942_1172	0.81	+0.7
1,207,316	+	lnt	Synpcc7942_1172	0.81	+0.3
1,207,316	+	lnt	Synpcc7942_1172	0.81	-2.1
1,207,317	+	lnt	Synpcc7942_1172	0.81	-2.7
1,207,317	+	lnt	Synpcc7942_1172	0.81	-2.4
1,207,362	-	lnt	Synpcc7942_1172	0.84	-0.1
1,207,397	+	lnt	Synpcc7942_1172	0.86	+1.5
1,207,402	+	lnt	Synpcc7942_1172	0.87	-1.3
1,207,402	+	lnt	Synpcc7942_1172	0.87	-3.1
1,207,402	+	lnt	Synpcc7942_1172	0.87	-1.4
1,207,410	-	lnt	Synpcc7942_1172	0.87	-1.1
1,207,410	-	lnt	Synpcc7942_1172	0.87	+0.9
1,207,410	-	lnt	Synpcc7942_1172	0.87	+0.2
1,207,412	+	lnt	Synpcc7942_1172	0.87	-1.1
1,207,412	+	lnt	Synpcc7942_1172	0.87	-1.5
1,207,418	+	lnt	Synpcc7942_1172	0.88	-1.3
1,207,420	-	lnt	Synpcc7942_1172	0.88	+0.2
1,207,439	+	lnt	Synpcc7942_1172	0.89	-0.5
1,207,449	+	lnt	Synpcc7942_1172	0.90	-0.3
1,207,452	-				+0.2
1,207,505	-				+2.0
1,207,540	+				-0.7
1,207,548	-				-1.1
1,207,580	+				-1.8
1,207,620	+				-0.6
1,207,622	-				-0.1
1,207,644	+				-0.4
1,207,663	+				-0.4
1,207,676	+				-0.4
1,207,676	+				+1.5
1,207,676	+				-2.4
1,207,684	-				-0.1
1,207,684	-				-1.1
1,207,684	-				-0.0
1,207,692	-				-0.1
1,207,705	+				+0.7
1,207,726	+				+1.7
1,207,765	+				+0.5
1,207,765	-				-0.1
1,207,767	+				+1.7
1,207,767	+				-1.7
1,207,775	-				+1.2
1,207,790	-				+2.2
1,207,811	-				-0.9
1,207,822	+				-0.2
1,207,822	+				+0.5
1,207,830	-				-1.7
1,207,830	-				-0.1
1,207,830	-				-0.5
1,207,830	-				+0.2
1,207,832	+				-0.6
1,207,832	+				-0.9
1,207,832	+				-2.4
1,207,833	+				-0.3
1,207,835	-				-0.5
1,207,838	+				-1.5
1,207,840	-				+1.1
1,207,840	-				-0.1
1,207,848	-				+0.1
1,207,855	+				+1.5
1,207,898	+				-0.1
1,207,938	-				+0.9
1,207,965	-				+0.9
1,207,987	-				+0.9
1,208,068	-		Synpcc7942_1173	0.16	+0.3
1,208,100	-		Synpcc7942_1173	0.18	-3.2
1,208,102	+		Synpcc7942_1173	0.19	+1.5
1,208,102	+		Synpcc7942_1173	0.19	+0.2
1,208,110	-		Synpcc7942_1173	0.19	-0.7
1,208,110	-		Synpcc7942_1173	0.19	+0.2
1,208,110	-		Synpcc7942_1173	0.19	-1.1
1,208,136	+		Synpcc7942_1173	0.21	+1.0
1,208,144	-		Synpcc7942_1173	0.22	+1.1
1,208,148	-		Synpcc7942_1173	0.22	-0.1
1,208,160	-		Synpcc7942_1173	0.23	+0.9
1,208,168	-		Synpcc7942_1173	0.24	-0.2
1,208,228	-		Synpcc7942_1173	0.29	+1.5
1,208,234	+		Synpcc7942_1173	0.29	-1.7
1,208,234	-		Synpcc7942_1173	0.29	+1.6
1,208,336	-		Synpcc7942_1173	0.37	+0.7
1,208,371	+		Synpcc7942_1173	0.40	-0.0
1,208,371	+		Synpcc7942_1173	0.40	-0.1
1,208,371	+		Synpcc7942_1173	0.40	+1.5
1,208,379	-		Synpcc7942_1173	0.40	+1.7
1,208,379	-		Synpcc7942_1173	0.40	-0.1
1,208,379	-		Synpcc7942_1173	0.40	-0.1
1,208,379	-		Synpcc7942_1173	0.40	+1.1
1,208,380	-		Synpcc7942_1173	0.41	+0.4
1,208,419	-		Synpcc7942_1173	0.44	+1.0
1,208,431	-		Synpcc7942_1173	0.45	-0.3
1,208,469	-		Synpcc7942_1173	0.48	+0.5
1,208,471	-		Synpcc7942_1173	0.48	+1.5
1,208,555	-		Synpcc7942_1173	0.54	-0.5
1,208,557	+		Synpcc7942_1173	0.54	-0.1
1,208,606	+		Synpcc7942_1173	0.58	+1.7
1,208,609	-		Synpcc7942_1173	0.59	+0.9
1,208,614	-		Synpcc7942_1173	0.59	+1.2
1,208,622	-		Synpcc7942_1173	0.60	+0.9
1,208,665	+		Synpcc7942_1173	0.63	+0.3
1,208,665	+		Synpcc7942_1173	0.63	-0.7
1,208,683	+		Synpcc7942_1173	0.64	+1.3
1,208,689	-		Synpcc7942_1173	0.65	+1.2
1,208,706	+		Synpcc7942_1173	0.66	+0.7
1,208,713	+		Synpcc7942_1173	0.67	-0.1
1,208,715	-		Synpcc7942_1173	0.67	+0.9
1,208,752	-		Synpcc7942_1173	0.70	-0.2
1,208,789	+		Synpcc7942_1173	0.73	+1.2
1,208,803	+		Synpcc7942_1173	0.74	-0.4
1,208,824	+				-1.1
1,208,832	-		Synpcc7942_1173	0.76	+0.1
1,208,832	-		Synpcc7942_1173	0.76	+0.1
1,208,832	-		Synpcc7942_1173	0.76	+0.4
1,208,836	+		Synpcc7942_1173	0.76	+0.9
1,208,838	-		Synpcc7942_1173	0.77	-0.5
1,208,838	-		Synpcc7942_1173	0.77	+0.9
1,208,857	+		Synpcc7942_1173	0.78	+1.8
1,208,862	+		Synpcc7942_1173	0.78	+0.6
1,208,865	-		Synpcc7942_1173	0.79	-0.2
1,208,870	-		Synpcc7942_1173	0.79	+0.5
1,208,929	+		Synpcc7942_1173	0.84	+0.3
1,208,932	-		Synpcc7942_1173	0.84	+1.1
1,208,949	+		Synpcc7942_1173	0.85	-0.1
1,208,959	-		Synpcc7942_1173	0.86	-0.4
1,208,959	-		Synpcc7942_1173	0.86	-1.5
1,208,991	-		Synpcc7942_1173	0.89	-1.1
1,209,004	-		Synpcc7942_1173	0.90	-0.1
1,209,006	+		Synpcc7942_1173	0.90	+1.7
1,209,014	-				-0.8
1,209,019	-				+0.4
1,209,024	-				-0.8
1,209,027	-				+1.9
1,209,089	+				+0.5
1,209,091	+				+0.1
1,209,099	-				+1.7
1,209,099	-				+0.9
1,209,106	+				-0.2
1,209,114	-				+0.3
1,209,147	+				+0.3
1,209,151	+				+1.5
1,209,155	-				-0.4
1,209,157	+				+0.0
1,209,157	+				+0.6
1,209,157	+				-1.4
1,209,159	-				+0.4
1,209,219	+				-1.1
1,209,236	+	psbJ	Synpcc7942_1174	0.10	-1.1
1,209,295	+	psbJ	Synpcc7942_1174	0.59	-2.7
1,209,345	+				-0.7
1,210,015	+				-2.1
1,210,063	-				-0.4