Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1171

Experiment: D-Cycloserine 0.015625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.015625 mg/ml
1,203,627	+		Synpcc7942_1169	0.86	+0.8
1,203,659	+		Synpcc7942_1169	0.88	+0.1
1,203,659	+		Synpcc7942_1169	0.88	-0.2
1,203,659	+		Synpcc7942_1169	0.88	-0.1
1,203,669	+		Synpcc7942_1169	0.89	-1.9
1,203,669	+		Synpcc7942_1169	0.89	+0.7
1,203,669	+		Synpcc7942_1169	0.89	+0.3
1,203,669	+		Synpcc7942_1169	0.89	-0.7
1,203,677	-		Synpcc7942_1169	0.89	+0.2
1,203,677	-		Synpcc7942_1169	0.89	-1.0
1,203,703	+				-2.1
1,204,314	+				-1.0
1,204,316	+				+0.8
1,204,316	+				+0.3
1,204,361	-				-1.5
1,204,373	-				-0.2
1,204,414	+				+0.9
1,204,414	+				+1.9
1,204,418	-				+0.9
1,204,422	-				+1.7
1,204,437	-				-0.7
1,204,452	+				+0.1
1,204,487	+				+0.9
1,204,487	-				-0.7
1,204,503	-				+0.9
1,204,522	+				+1.7
1,204,530	-				+1.5
1,204,594	-				+1.1
1,204,624	-				-0.1
1,204,690	-				+0.2
1,204,702	-				+0.6
1,204,705	-				-1.1
1,204,737	+				-0.3
1,204,742	+				-1.2
1,204,796	-		Synpcc7942_1171	0.13	+0.6
1,204,930	-		Synpcc7942_1171	0.22	+0.7
1,204,973	-		Synpcc7942_1171	0.25	+0.7
1,204,979	-		Synpcc7942_1171	0.25	+0.5
1,204,979	-		Synpcc7942_1171	0.25	+0.4
1,205,029	+				-0.1
1,205,029	+		Synpcc7942_1171	0.29	+1.8
1,205,037	-		Synpcc7942_1171	0.29	-0.1
1,205,051	-		Synpcc7942_1171	0.30	+0.7
1,205,063	+		Synpcc7942_1171	0.31	+1.1
1,205,065	+		Synpcc7942_1171	0.31	+0.2
1,205,065	+		Synpcc7942_1171	0.31	-2.1
1,205,078	-		Synpcc7942_1171	0.32	+0.7
1,205,117	-		Synpcc7942_1171	0.34	-0.1
1,205,117	-		Synpcc7942_1171	0.34	+1.1
1,205,144	+		Synpcc7942_1171	0.36	+1.5
1,205,172	+		Synpcc7942_1171	0.38	+0.2
1,205,203	-		Synpcc7942_1171	0.40	+0.4
1,205,249	+		Synpcc7942_1171	0.43	+0.5
1,205,255	+		Synpcc7942_1171	0.43	-1.5
1,205,303	+		Synpcc7942_1171	0.47	+0.9
1,205,327	+		Synpcc7942_1171	0.48	-0.9
1,205,341	-		Synpcc7942_1171	0.49	+0.5
1,205,470	-		Synpcc7942_1171	0.58	+1.0
1,205,493	+		Synpcc7942_1171	0.59	+0.6
1,205,567	-		Synpcc7942_1171	0.64	-2.9
1,205,577	-		Synpcc7942_1171	0.65	+0.1
1,205,577	-		Synpcc7942_1171	0.65	+0.3
1,205,617	+		Synpcc7942_1171	0.67	-0.5
1,205,785	-		Synpcc7942_1171	0.79	+0.1
1,205,889	+		Synpcc7942_1171	0.85	+0.3
1,205,889	+		Synpcc7942_1171	0.85	+0.1
1,205,892	-		Synpcc7942_1171	0.86	+0.0
1,205,901	+		Synpcc7942_1171	0.86	+0.8
1,205,909	-		Synpcc7942_1171	0.87	-1.1
1,205,909	-		Synpcc7942_1171	0.87	+0.5
1,205,936	+		Synpcc7942_1171	0.88	+0.7
1,205,957	+		Synpcc7942_1171	0.90	-1.1
1,205,989	+				-1.7
1,205,989	+				-0.3
1,206,065	+				+1.5
1,206,079	+				+2.2
1,206,113	-				-0.1
1,206,120	+				-2.1
1,206,127	-				+1.7
1,206,127	-				-0.7
1,206,159	+				+0.6
1,206,167	-				+0.2
1,206,172	-				-0.9
1,206,172	-				-0.6
1,206,187	+				+0.7
1,206,192	+				+0.5
1,206,200	-				+0.9
1,206,216	+				-1.7
1,206,219	-				+3.0
1,206,242	-				+0.9
1,206,259	+				-1.8
1,206,310	+	lnt	Synpcc7942_1172	0.11	-0.5
1,206,318	-	lnt	Synpcc7942_1172	0.12	+0.9
1,206,329	+	lnt	Synpcc7942_1172	0.12	-0.8
1,206,329	-	lnt	Synpcc7942_1172	0.12	+0.6
1,206,334	+	lnt	Synpcc7942_1172	0.13	-0.6
1,206,334	+	lnt	Synpcc7942_1172	0.13	-0.4
1,206,342	-	lnt	Synpcc7942_1172	0.13	+0.7
1,206,342	-	lnt	Synpcc7942_1172	0.13	-0.3
1,206,342	-	lnt	Synpcc7942_1172	0.13	-0.2
1,206,349	+	lnt	Synpcc7942_1172	0.14	-1.8
1,206,364	-	lnt	Synpcc7942_1172	0.15	-1.7
1,206,437	+	lnt	Synpcc7942_1172	0.20	+0.5
1,206,522	-	lnt	Synpcc7942_1172	0.26	-0.7
1,206,621	-	lnt	Synpcc7942_1172	0.33	+1.9
1,206,627	+	lnt	Synpcc7942_1172	0.33	-0.1
1,206,627	+	lnt	Synpcc7942_1172	0.33	-0.2
1,206,660	-	lnt	Synpcc7942_1172	0.35	-0.6
1,206,712	-	lnt	Synpcc7942_1172	0.39	-1.7
1,206,726	+	lnt	Synpcc7942_1172	0.40	+1.7
1,206,734	-	lnt	Synpcc7942_1172	0.40	-0.8
1,206,734	-	lnt	Synpcc7942_1172	0.40	+0.9
1,206,769	-	lnt	Synpcc7942_1172	0.43	-0.1
1,206,769	-	lnt	Synpcc7942_1172	0.43	-2.1
1,206,775	+	lnt	Synpcc7942_1172	0.43	+1.9
1,206,784	-	lnt	Synpcc7942_1172	0.44	-0.8
1,206,837	+	lnt	Synpcc7942_1172	0.48	-3.0
1,206,840	-	lnt	Synpcc7942_1172	0.48	-2.9
1,206,846	+	lnt	Synpcc7942_1172	0.48	-0.1
1,206,854	-	lnt	Synpcc7942_1172	0.49	+0.5
1,206,854	-	lnt	Synpcc7942_1172	0.49	-2.4
1,206,865	+	lnt	Synpcc7942_1172	0.49	-0.7
1,206,869	+	lnt	Synpcc7942_1172	0.50	-0.8
1,206,875	+	lnt	Synpcc7942_1172	0.50	+0.3
1,206,885	+	lnt	Synpcc7942_1172	0.51	-1.1
1,206,903	-	lnt	Synpcc7942_1172	0.52	-0.3
1,206,903	-	lnt	Synpcc7942_1172	0.52	-0.3
1,206,903	-	lnt	Synpcc7942_1172	0.52	-0.8
1,206,903	-	lnt	Synpcc7942_1172	0.52	+1.5
1,206,903	-	lnt	Synpcc7942_1172	0.52	+1.3
1,206,903	-	lnt	Synpcc7942_1172	0.52	+0.5
1,206,930	+	lnt	Synpcc7942_1172	0.54	-0.3
1,206,941	+	lnt	Synpcc7942_1172	0.55	+0.4
1,206,964	+	lnt	Synpcc7942_1172	0.56	-1.4
1,206,964	+	lnt	Synpcc7942_1172	0.56	-1.9
1,206,972	-	lnt	Synpcc7942_1172	0.57	+0.9
1,206,972	-	lnt	Synpcc7942_1172	0.57	+1.4
1,206,977	-	lnt	Synpcc7942_1172	0.57	+1.2
1,207,009	+	lnt	Synpcc7942_1172	0.59	-2.4
1,207,017	-	lnt	Synpcc7942_1172	0.60	-1.6
1,207,017	-	lnt	Synpcc7942_1172	0.60	+0.3
1,207,017	-	lnt	Synpcc7942_1172	0.60	+1.1
1,207,053	-	lnt	Synpcc7942_1172	0.62	+0.7
1,207,066	+	lnt	Synpcc7942_1172	0.63	-1.8
1,207,097	+	lnt	Synpcc7942_1172	0.65	+0.5
1,207,100	-	lnt	Synpcc7942_1172	0.66	-2.7
1,207,105	-	lnt	Synpcc7942_1172	0.66	-1.2