Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1139

Experiment: D-Cycloserine 0.015625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.015625 mg/ml
1,161,565	+				+0.7
1,161,585	-				+1.2
1,161,588	-				-2.2
1,161,603	+				-0.7
1,161,603	+				-2.2
1,161,611	-				+1.8
1,161,611	-				+0.2
1,161,611	-				-0.1
1,161,615	+				-2.1
1,162,587	-				-1.9
1,162,592	-				-0.1
1,162,606	+				-2.4
1,162,655	+				+0.8
1,162,663	-				-1.1
1,162,668	+				-3.2
1,162,683	-				+0.1
1,162,685	+				-2.4
1,162,709	+				-0.7
1,162,733	+		Synpcc7942_1139	0.10	-2.7
1,162,733	+		Synpcc7942_1139	0.10	-3.0
1,162,733	+		Synpcc7942_1139	0.10	-0.5
1,162,733	+		Synpcc7942_1139	0.10	-1.4
1,162,741	-		Synpcc7942_1139	0.11	-1.4
1,162,741	-		Synpcc7942_1139	0.11	-1.9
1,162,775	-				-0.1
1,162,798	-		Synpcc7942_1139	0.14	-0.1
1,162,802	+		Synpcc7942_1139	0.14	-1.3
1,162,808	-		Synpcc7942_1139	0.15	-2.5
1,162,810	-		Synpcc7942_1139	0.15	-2.5
1,162,814	+		Synpcc7942_1139	0.15	-1.7
1,162,827	+		Synpcc7942_1139	0.16	-2.4
1,162,827	+		Synpcc7942_1139	0.16	-2.1
1,162,832	+		Synpcc7942_1139	0.16	-2.9
1,162,832	+		Synpcc7942_1139	0.16	-2.2
1,162,835	-		Synpcc7942_1139	0.16	-3.5
1,162,857	+		Synpcc7942_1139	0.17	-4.0
1,162,881	+		Synpcc7942_1139	0.19	-2.8
1,162,886	+		Synpcc7942_1139	0.19	-0.9
1,162,906	+		Synpcc7942_1139	0.20	-2.2
1,162,927	+		Synpcc7942_1139	0.22	-1.7
1,162,931	+		Synpcc7942_1139	0.22	-1.7
1,162,985	+		Synpcc7942_1139	0.25	-3.5
1,162,991	-		Synpcc7942_1139	0.25	-3.4
1,162,997	+		Synpcc7942_1139	0.26	-3.7
1,162,997	+		Synpcc7942_1139	0.26	-2.4
1,163,006	-		Synpcc7942_1139	0.26	-1.3
1,163,026	-		Synpcc7942_1139	0.28	-1.1
1,163,026	-		Synpcc7942_1139	0.28	-0.1
1,163,059	-		Synpcc7942_1139	0.30	-3.5
1,163,064	-		Synpcc7942_1139	0.30	-1.4
1,163,066	+		Synpcc7942_1139	0.30	-2.2
1,163,069	-		Synpcc7942_1139	0.30	-0.7
1,163,087	+				-1.7
1,163,097	+		Synpcc7942_1139	0.32	-1.4
1,163,105	-		Synpcc7942_1139	0.32	-0.1
1,163,128	+		Synpcc7942_1139	0.34	-2.4
1,163,227	-		Synpcc7942_1139	0.40	-1.5
1,163,235	+		Synpcc7942_1139	0.40	-1.1
1,163,253	-		Synpcc7942_1139	0.41	+0.5
1,163,264	+		Synpcc7942_1139	0.42	-1.8
1,163,272	+		Synpcc7942_1139	0.42	-1.9
1,163,274	+		Synpcc7942_1139	0.42	-2.6
1,163,278	-		Synpcc7942_1139	0.43	-1.0
1,163,278	-		Synpcc7942_1139	0.43	-1.9
1,163,280	-		Synpcc7942_1139	0.43	-1.9
1,163,313	+		Synpcc7942_1139	0.45	-3.5
1,163,328	-		Synpcc7942_1139	0.46	-2.5
1,163,330	-		Synpcc7942_1139	0.46	-2.2
1,163,347	-		Synpcc7942_1139	0.47	-0.4
1,163,348	-		Synpcc7942_1139	0.47	-1.9
1,163,378	-		Synpcc7942_1139	0.49	-4.2
1,163,384	+		Synpcc7942_1139	0.49	-1.5
1,163,387	+		Synpcc7942_1139	0.49	-3.6
1,163,402	-		Synpcc7942_1139	0.50	-3.1
1,163,402	-		Synpcc7942_1139	0.50	-2.3
1,163,406	+		Synpcc7942_1139	0.50	-2.5
1,163,406	+		Synpcc7942_1139	0.50	-2.1
1,163,414	-		Synpcc7942_1139	0.51	-2.6
1,163,414	-		Synpcc7942_1139	0.51	-0.4
1,163,414	-		Synpcc7942_1139	0.51	-1.8
1,163,414	-		Synpcc7942_1139	0.51	-2.9
1,163,429	-		Synpcc7942_1139	0.52	-2.7
1,163,450	-		Synpcc7942_1139	0.53	-3.2
1,163,457	+		Synpcc7942_1139	0.53	-1.2
1,163,465	-		Synpcc7942_1139	0.54	-2.5
1,163,514	+		Synpcc7942_1139	0.57	-1.1
1,163,515	+		Synpcc7942_1139	0.57	-2.1
1,163,515	+		Synpcc7942_1139	0.57	-1.2
1,163,515	+		Synpcc7942_1139	0.57	-1.7
1,163,523	-		Synpcc7942_1139	0.57	-3.1
1,163,524	+		Synpcc7942_1139	0.57	-1.7
1,163,524	+		Synpcc7942_1139	0.57	-3.2
1,163,524	+		Synpcc7942_1139	0.57	-2.1
1,163,524	+		Synpcc7942_1139	0.57	-3.9
1,163,524	+		Synpcc7942_1139	0.57	+0.5
1,163,524	+		Synpcc7942_1139	0.57	-3.1
1,163,524	+		Synpcc7942_1139	0.57	-2.6
1,163,525	+		Synpcc7942_1139	0.57	-3.2
1,163,529	+		Synpcc7942_1139	0.58	-1.4
1,163,532	-		Synpcc7942_1139	0.58	-3.7
1,163,532	-		Synpcc7942_1139	0.58	-2.4
1,163,532	-		Synpcc7942_1139	0.58	-2.5
1,163,532	-		Synpcc7942_1139	0.58	-2.1
1,163,532	-		Synpcc7942_1139	0.58	-2.9
1,163,563	-		Synpcc7942_1139	0.60	-2.7
1,163,577	-		Synpcc7942_1139	0.61	-2.4
1,163,591	-		Synpcc7942_1139	0.61	-2.4
1,163,615	-		Synpcc7942_1139	0.63	-0.5
1,163,616	+		Synpcc7942_1139	0.63	-2.7
1,163,624	-		Synpcc7942_1139	0.63	-2.4
1,163,645	-		Synpcc7942_1139	0.65	-3.4
1,163,647	+		Synpcc7942_1139	0.65	-2.0
1,163,656	+		Synpcc7942_1139	0.65	-4.8
1,163,666	-		Synpcc7942_1139	0.66	-1.7
1,163,679	-		Synpcc7942_1139	0.67	-2.9
1,163,685	+		Synpcc7942_1139	0.67	-3.0
1,163,688	-		Synpcc7942_1139	0.67	-1.3
1,163,707	+		Synpcc7942_1139	0.68	-3.2
1,163,736	-		Synpcc7942_1139	0.70	-1.7
1,163,775	+		Synpcc7942_1139	0.72	-2.8
1,163,783	-		Synpcc7942_1139	0.73	-1.8
1,163,795	+		Synpcc7942_1139	0.74	-1.2
1,163,805	-		Synpcc7942_1139	0.74	-1.3
1,163,805	-		Synpcc7942_1139	0.74	-3.5
1,163,913	+		Synpcc7942_1139	0.81	-2.0
1,163,913	-		Synpcc7942_1139	0.81	-2.4
1,163,930	+		Synpcc7942_1139	0.82	-0.9
1,163,930	-		Synpcc7942_1139	0.82	-3.1
1,163,936	-		Synpcc7942_1139	0.82	-2.2
1,163,949	-		Synpcc7942_1139	0.83	-1.9
1,164,058	+		Synpcc7942_1139	0.89	-2.7
1,164,058	+		Synpcc7942_1139	0.89	-3.9
1,164,058	+		Synpcc7942_1139	0.89	-2.7
1,164,062	+		Synpcc7942_1139	0.90	-2.9
1,164,065	-				-2.1
1,164,067	+		Synpcc7942_1139	0.90	-3.4
1,164,076	+				-1.1
1,164,078	+				-3.4
1,164,078	-				-2.1
1,164,084	-				-0.8
1,164,084	-				-1.4
1,164,084	-				+0.5
1,164,095	+				-2.5
1,164,104	-				-2.0
1,164,107	+				-2.8
1,164,107	+				-3.0
1,164,113	+				-3.4
1,164,115	-				-4.0
1,164,115	-				-4.4
1,164,115	-				-2.8
1,164,115	-				-3.2
1,164,115	-				-1.7
1,164,115	-				-2.1
1,164,116	-				-2.3
1,164,121	+				-4.4
1,164,125	+				-0.1
1,164,134	+				-2.1
1,164,142	-				-0.5
1,164,142	-				-3.1
1,164,148	-				+0.5
1,164,148	-				-2.3
1,164,225	+				-1.7
1,164,226	+				-3.4
1,164,230	-				-1.7
1,164,243	-				-2.7
1,164,248	+				-3.5
1,164,256	-				-2.1
1,164,256	-				-2.3
1,164,256	-				-3.4
1,164,256	-				-1.1
1,164,277	-				-3.7
1,164,278	+				-2.1
1,164,278	+				-1.7
1,164,278	+				-2.3
1,164,292	+				+1.1
1,164,293	-				-2.4
1,164,300	-				+1.1
1,164,316	-				+1.1
1,164,317	+				+0.8
1,164,322	+				-0.1
1,164,343	+				-0.4
1,164,409	-				-1.4
1,164,409	-				-1.1
1,164,448	+				-3.4
1,164,448	-				-1.1
1,164,486	+				-3.0
1,164,569	-		Synpcc7942_1140	0.12	-3.4
1,164,597	+		Synpcc7942_1140	0.14	+0.5
1,164,627	+		Synpcc7942_1140	0.16	-1.1
1,164,660	-		Synpcc7942_1140	0.18	-2.1
1,164,674	+		Synpcc7942_1140	0.18	-2.9
1,164,674	+		Synpcc7942_1140	0.18	-0.8
1,164,675	+		Synpcc7942_1140	0.18	-1.1
1,164,675	+		Synpcc7942_1140	0.18	-0.1
1,164,680	-		Synpcc7942_1140	0.19	-1.1
1,164,680	-		Synpcc7942_1140	0.19	-2.2
1,164,682	-		Synpcc7942_1140	0.19	-0.7
1,164,682	-		Synpcc7942_1140	0.19	-1.8
1,164,683	-		Synpcc7942_1140	0.19	-0.1
1,164,702	+		Synpcc7942_1140	0.20	-3.7
1,164,767	-		Synpcc7942_1140	0.24	-0.4
1,164,767	-		Synpcc7942_1140	0.24	-1.1
1,164,772	-		Synpcc7942_1140	0.24	-2.7
1,164,784	-		Synpcc7942_1140	0.25	-2.7
1,164,786	+		Synpcc7942_1140	0.25	-1.2
1,164,788	+		Synpcc7942_1140	0.25	-1.4
1,164,797	-		Synpcc7942_1140	0.25	-1.1
1,164,825	+		Synpcc7942_1140	0.27	-1.1
1,164,899	-		Synpcc7942_1140	0.31	-4.2
1,164,903	+		Synpcc7942_1140	0.31	+0.2
1,164,917	+		Synpcc7942_1140	0.32	-1.5
1,164,917	+		Synpcc7942_1140	0.32	-2.8
1,164,917	+		Synpcc7942_1140	0.32	-0.8
1,164,917	+		Synpcc7942_1140	0.32	-2.1
1,164,917	+		Synpcc7942_1140	0.32	-1.1
1,164,917	+		Synpcc7942_1140	0.32	-3.2
1,164,917	+		Synpcc7942_1140	0.32	-1.7
1,164,925	-		Synpcc7942_1140	0.33	-2.0
1,164,925	-		Synpcc7942_1140	0.33	-0.1
1,164,925	-		Synpcc7942_1140	0.33	-1.1
1,164,925	-		Synpcc7942_1140	0.33	-1.9
1,164,926	-		Synpcc7942_1140	0.33	-1.7
1,164,926	-		Synpcc7942_1140	0.33	-1.0
1,164,937	-		Synpcc7942_1140	0.33	-1.6
1,164,996	-		Synpcc7942_1140	0.37	-1.1
1,165,022	+		Synpcc7942_1140	0.38	-0.3
1,165,035	+		Synpcc7942_1140	0.39	+0.5
1,165,041	-		Synpcc7942_1140	0.39	-1.5
1,165,043	+		Synpcc7942_1140	0.39	+0.3
1,165,051	-		Synpcc7942_1140	0.40	-2.4
1,165,051	-		Synpcc7942_1140	0.40	-2.1
1,165,067	-		Synpcc7942_1140	0.41	-1.2
1,165,077	-		Synpcc7942_1140	0.41	-1.0
1,165,081	+		Synpcc7942_1140	0.42	-3.0
1,165,081	+		Synpcc7942_1140	0.42	-1.2
1,165,102	+		Synpcc7942_1140	0.43	-1.7
1,165,103	+		Synpcc7942_1140	0.43	-1.2
1,165,111	-		Synpcc7942_1140	0.43	-0.3
1,165,119	-		Synpcc7942_1140	0.44	-0.1
1,165,135	-		Synpcc7942_1140	0.45	-1.7
1,165,151	+		Synpcc7942_1140	0.46	-0.3
1,165,151	+		Synpcc7942_1140	0.46	-1.1
1,165,160	-		Synpcc7942_1140	0.46	-1.0
1,165,165	+		Synpcc7942_1140	0.46	-1.4
1,165,173	-		Synpcc7942_1140	0.47	-1.7
1,165,173	-		Synpcc7942_1140	0.47	-3.2
1,165,181	+		Synpcc7942_1140	0.47	-0.1
1,165,206	+		Synpcc7942_1140	0.49	-2.3
1,165,217	+		Synpcc7942_1140	0.49	-1.9