Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1127

Experiment: D-Cycloserine 0.015625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.015625 mg/ml
1,144,374	-				-1.7
1,144,374	-				+1.5
1,144,390	+				-1.1
1,144,512	+		Synpcc7942_1126	0.15	-2.7
1,144,528	-		Synpcc7942_1126	0.17	-0.9
1,144,585	+		Synpcc7942_1126	0.23	-0.1
1,144,611	+		Synpcc7942_1126	0.26	-1.1
1,144,619	-		Synpcc7942_1126	0.27	-0.5
1,144,891	-		Synpcc7942_1126	0.60	-0.7
1,144,904	-		Synpcc7942_1126	0.62	-1.1
1,144,940	+		Synpcc7942_1126	0.66	-1.7
1,144,985	-		Synpcc7942_1126	0.71	-1.1
1,145,002	+		Synpcc7942_1126	0.73	-0.3
1,145,051	+		Synpcc7942_1126	0.79	-0.4
1,145,051	+		Synpcc7942_1126	0.79	+0.4
1,145,082	-		Synpcc7942_1126	0.83	-2.9
1,145,220	+				-0.7
1,145,242	+				+0.1
1,145,274	+				-1.0
1,145,274	+				-0.4
1,145,282	-				-0.1
1,145,287	-				-0.1
1,145,313	+				+0.3
1,145,313	+				-0.4
1,145,335	+				-0.4
1,145,335	+				+0.4
1,145,335	+				+1.1
1,145,343	-				+1.7
1,145,343	-				-0.3
1,145,345	+				+0.1
1,145,359	+				-2.7
1,145,377	+				-2.5
1,145,419	-				+0.4
1,145,472	+				-2.1
1,145,479	+				-2.1
1,145,534	+	tldD	Synpcc7942_1127	0.11	-2.1
1,145,580	-	tldD	Synpcc7942_1127	0.14	-1.1
1,145,585	+	tldD	Synpcc7942_1127	0.14	-1.7
1,145,596	+	tldD	Synpcc7942_1127	0.15	-2.0
1,145,596	+	tldD	Synpcc7942_1127	0.15	-1.3
1,145,604	-	tldD	Synpcc7942_1127	0.16	-2.9
1,145,644	+	tldD	Synpcc7942_1127	0.18	-1.3
1,145,652	-	tldD	Synpcc7942_1127	0.19	-0.8
1,145,659	+	tldD	Synpcc7942_1127	0.19	-1.1
1,145,664	-	tldD	Synpcc7942_1127	0.20	-2.1
1,145,672	-	tldD	Synpcc7942_1127	0.20	-1.7
1,145,688	+	tldD	Synpcc7942_1127	0.21	-1.4
1,145,696	-	tldD	Synpcc7942_1127	0.22	-1.1
1,145,696	-	tldD	Synpcc7942_1127	0.22	-2.0
1,145,717	-	tldD	Synpcc7942_1127	0.23	-0.3
1,145,721	+	tldD	Synpcc7942_1127	0.24	-2.5
1,145,728	+	tldD	Synpcc7942_1127	0.24	+1.2
1,145,746	+	tldD	Synpcc7942_1127	0.25	-3.3
1,145,754	-	tldD	Synpcc7942_1127	0.26	-3.1
1,145,765	-	tldD	Synpcc7942_1127	0.27	+2.5
1,145,794	+	tldD	Synpcc7942_1127	0.29	-2.0
1,145,812	-	tldD	Synpcc7942_1127	0.30	+1.9
1,145,820	-	tldD	Synpcc7942_1127	0.30	-0.7
1,145,833	-	tldD	Synpcc7942_1127	0.31	-0.7
1,145,840	-	tldD	Synpcc7942_1127	0.32	-2.9
1,145,861	-	tldD	Synpcc7942_1127	0.33	+0.5
1,145,911	+	tldD	Synpcc7942_1127	0.37	-2.2
1,145,911	+	tldD	Synpcc7942_1127	0.37	-0.7
1,145,911	+	tldD	Synpcc7942_1127	0.37	-2.1
1,145,919	-	tldD	Synpcc7942_1127	0.37	-2.4
1,145,945	-	tldD	Synpcc7942_1127	0.39	-2.1
1,145,987	-	tldD	Synpcc7942_1127	0.42	-2.4
1,146,030	+	tldD	Synpcc7942_1127	0.45	-3.6
1,146,062	-	tldD	Synpcc7942_1127	0.47	-2.9
1,146,096	-	tldD	Synpcc7942_1127	0.49	-0.1
1,146,140	+	tldD	Synpcc7942_1127	0.52	-5.4
1,146,198	+	tldD	Synpcc7942_1127	0.56	-0.1
1,146,246	-	tldD	Synpcc7942_1127	0.59	-0.4
1,146,281	+	tldD	Synpcc7942_1127	0.62	-1.7
1,146,292	-	tldD	Synpcc7942_1127	0.63	-1.3
1,146,360	+	tldD	Synpcc7942_1127	0.67	-1.3
1,146,363	-	tldD	Synpcc7942_1127	0.67	-1.3
1,146,435	+	tldD	Synpcc7942_1127	0.72	-1.7
1,146,440	+	tldD	Synpcc7942_1127	0.73	-2.8
1,146,440	+	tldD	Synpcc7942_1127	0.73	-2.3
1,146,457	-	tldD	Synpcc7942_1127	0.74	-1.5
1,146,468	+	tldD	Synpcc7942_1127	0.74	-1.7
1,146,468	+	tldD	Synpcc7942_1127	0.74	-1.9
1,146,481	-	tldD	Synpcc7942_1127	0.75	-0.3
1,146,503	+	tldD	Synpcc7942_1127	0.77	-0.1
1,146,508	+	tldD	Synpcc7942_1127	0.77	-1.5
1,146,508	+	tldD	Synpcc7942_1127	0.77	-2.9
1,146,548	-	tldD	Synpcc7942_1127	0.80	-3.6
1,146,560	-	tldD	Synpcc7942_1127	0.81	-2.9
1,146,619	-	tldD	Synpcc7942_1127	0.85	-2.7
1,146,619	-	tldD	Synpcc7942_1127	0.85	-2.1
1,146,676	+	tldD	Synpcc7942_1127	0.89	-2.0
1,146,689	-	tldD	Synpcc7942_1127	0.90	-0.7
1,146,703	+				-1.7
1,146,721	-				-1.4
1,146,746	+				-0.1
1,146,775	-				-3.6
1,146,786	-				-0.7
1,146,814	-				-0.8
1,146,814	-				+0.2
1,146,814	-				-2.9
1,146,821	-				-2.9
1,146,892	+				-1.4
1,146,893	+				+0.9
1,146,916	+				-1.3
1,146,916	+				-0.4
1,146,916	+				-0.7
1,146,916	+				+0.6
1,146,924	-				-0.6
1,146,924	-				-2.4
1,147,445	+				+0.8
1,147,454	+				+0.0
1,147,456	+				+0.9
1,147,508	-		Synpcc7942_1128	0.15	-0.1
1,147,626	+		Synpcc7942_1128	0.25	+2.6
1,147,682	-		Synpcc7942_1128	0.31	-0.1
1,147,781	-		Synpcc7942_1128	0.40	-0.1
1,147,824	-		Synpcc7942_1128	0.44	+0.4
1,147,831	+		Synpcc7942_1128	0.44	-1.1