Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1108

Experiment: D-Cycloserine 0.015625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.015625 mg/ml
1,124,400	-		Synpcc7942_1107	0.14	+0.9
1,124,432	+		Synpcc7942_1107	0.18	-1.4
1,124,433	-		Synpcc7942_1107	0.18	+0.9
1,124,453	-		Synpcc7942_1107	0.20	+0.4
1,124,470	+		Synpcc7942_1107	0.23	+0.5
1,124,478	-		Synpcc7942_1107	0.24	-0.9
1,124,478	-		Synpcc7942_1107	0.24	+0.5
1,124,498	-		Synpcc7942_1107	0.26	-0.5
1,124,499	-		Synpcc7942_1107	0.26	-0.2
1,124,503	+		Synpcc7942_1107	0.27	-0.6
1,124,503	+		Synpcc7942_1107	0.27	-1.1
1,124,511	-		Synpcc7942_1107	0.28	-0.1
1,124,513	+		Synpcc7942_1107	0.28	-0.4
1,124,521	-		Synpcc7942_1107	0.29	+1.5
1,124,523	+		Synpcc7942_1107	0.29	-0.3
1,124,523	+		Synpcc7942_1107	0.29	+1.6
1,124,523	+		Synpcc7942_1107	0.29	+0.1
1,124,523	+		Synpcc7942_1107	0.29	-0.2
1,124,523	+		Synpcc7942_1107	0.29	-0.4
1,124,531	-		Synpcc7942_1107	0.30	+0.7
1,124,531	-		Synpcc7942_1107	0.30	+0.1
1,124,531	-		Synpcc7942_1107	0.30	+0.2
1,124,550	+		Synpcc7942_1107	0.33	+0.6
1,124,550	+		Synpcc7942_1107	0.33	-0.9
1,124,563	-		Synpcc7942_1107	0.34	-0.1
1,124,567	-		Synpcc7942_1107	0.35	-0.3
1,124,580	+		Synpcc7942_1107	0.36	-0.5
1,124,580	+		Synpcc7942_1107	0.36	-1.5
1,124,626	-		Synpcc7942_1107	0.42	+1.0
1,124,646	+		Synpcc7942_1107	0.45	-0.4
1,124,653	+		Synpcc7942_1107	0.45	-0.8
1,124,661	-		Synpcc7942_1107	0.46	-0.5
1,124,661	-		Synpcc7942_1107	0.46	-1.7
1,124,661	-		Synpcc7942_1107	0.46	+0.6
1,124,661	-		Synpcc7942_1107	0.46	+0.1
1,124,661	-		Synpcc7942_1107	0.46	-0.7
1,124,680	+		Synpcc7942_1107	0.49	+0.6
1,124,688	-		Synpcc7942_1107	0.50	+0.6
1,124,691	+		Synpcc7942_1107	0.50	-0.6
1,124,693	-		Synpcc7942_1107	0.50	+1.4
1,124,701	+		Synpcc7942_1107	0.51	+0.4
1,124,701	+		Synpcc7942_1107	0.51	-0.7
1,124,701	+		Synpcc7942_1107	0.51	-0.1
1,124,707	+		Synpcc7942_1107	0.52	+0.8
1,124,709	-		Synpcc7942_1107	0.52	+0.7
1,124,709	-		Synpcc7942_1107	0.52	+2.1
1,124,709	-		Synpcc7942_1107	0.52	-0.7
1,124,709	-		Synpcc7942_1107	0.52	-0.4
1,124,709	-		Synpcc7942_1107	0.52	+0.7
1,124,720	-		Synpcc7942_1107	0.54	+1.2
1,124,738	+		Synpcc7942_1107	0.56	+1.2
1,124,753	+		Synpcc7942_1107	0.58	-0.1
1,124,768	+		Synpcc7942_1107	0.60	-4.1
1,124,776	+		Synpcc7942_1107	0.61	+0.4
1,124,776	-		Synpcc7942_1107	0.61	+1.1
1,124,786	-		Synpcc7942_1107	0.62	-0.7
1,124,791	-		Synpcc7942_1107	0.63	-0.0
1,124,812	+		Synpcc7942_1107	0.65	-0.7
1,124,813	+		Synpcc7942_1107	0.65	+0.2
1,124,820	-		Synpcc7942_1107	0.66	-0.8
1,124,821	-		Synpcc7942_1107	0.66	+0.2
1,124,821	-		Synpcc7942_1107	0.66	-0.1
1,124,823	+		Synpcc7942_1107	0.67	+0.3
1,124,866	-		Synpcc7942_1107	0.72	-0.2
1,124,866	-		Synpcc7942_1107	0.72	+0.2
1,124,873	+		Synpcc7942_1107	0.73	+0.1
1,124,873	+		Synpcc7942_1107	0.73	+2.2
1,124,873	+		Synpcc7942_1107	0.73	+0.0
1,124,881	-		Synpcc7942_1107	0.74	+0.2
1,124,881	-		Synpcc7942_1107	0.74	-1.0
1,124,881	-		Synpcc7942_1107	0.74	-1.0
1,124,891	-		Synpcc7942_1107	0.75	+0.4
1,124,891	-		Synpcc7942_1107	0.75	+1.2
1,124,896	-		Synpcc7942_1107	0.76	-1.0
1,124,926	+		Synpcc7942_1107	0.80	-1.9
1,124,937	+		Synpcc7942_1107	0.81	+0.5
1,124,937	+		Synpcc7942_1107	0.81	+1.2
1,124,937	+		Synpcc7942_1107	0.81	+0.8
1,124,942	+		Synpcc7942_1107	0.82	+0.9
1,124,945	-		Synpcc7942_1107	0.82	+0.3
1,124,948	+		Synpcc7942_1107	0.82	-0.4
1,124,950	-		Synpcc7942_1107	0.83	+0.9
1,124,951	-		Synpcc7942_1107	0.83	-1.5
1,124,956	-		Synpcc7942_1107	0.83	-0.9
1,124,963	-		Synpcc7942_1107	0.84	+0.3
1,124,978	-		Synpcc7942_1107	0.86	-0.8
1,124,980	-		Synpcc7942_1107	0.86	+0.9
1,124,986	+		Synpcc7942_1107	0.87	+1.1
1,125,000	+		Synpcc7942_1107	0.89	+2.9
1,125,000	+		Synpcc7942_1107	0.89	+3.1
1,125,036	+				+0.8
1,125,051	+				-0.3
1,125,079	+				+0.1
1,125,079	+				-0.0
1,125,080	-				-0.6
1,125,080	-				-0.5
1,125,087	-				-0.2
1,125,125	+				-0.1
1,125,186	-				-1.9
1,125,186	-				+0.6
1,125,236	+				+0.8
1,125,244	-				+0.8
1,125,244	-				+0.1
1,125,251	+				+0.5
1,125,262	+				+0.7
1,125,263	+				-0.1
1,125,263	+				+0.3
1,125,263	+				+0.9
1,125,273	+				-0.4
1,125,282	-				-0.1
1,125,375	+				+1.1
1,125,375	+				-2.1
1,125,468	+	Hbs or HU-like	Synpcc7942_1108	0.34	-1.4
1,125,500	+	Hbs or HU-like	Synpcc7942_1108	0.46	+0.7
1,125,518	+	Hbs or HU-like	Synpcc7942_1108	0.53	+1.5
1,125,542	+	Hbs or HU-like	Synpcc7942_1108	0.61	-0.1
1,125,548	-	Hbs or HU-like	Synpcc7942_1108	0.63	-0.8
1,125,631	-				-0.1
1,125,641	+				-1.7
1,125,652	-				+0.7
1,125,664	+				+1.3
1,125,664	+				+1.2
1,125,664	+				+0.3
1,125,672	-				+0.3
1,125,672	-				+0.5
1,125,672	-				-0.5
1,125,675	+				+1.2
1,125,677	-				-0.7