Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1080
Experiment: D-Cycloserine 0.015625 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | D-Cycloserine 0.015625 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,091,558 | + | -0.1 | |||
1,091,611 | + | +0.6 | |||
1,091,751 | + | -2.1 | |||
1,091,941 | + | Synpcc7942_1080 | 0.12 | -0.9 | |
1,092,033 | + | Synpcc7942_1080 | 0.19 | -1.7 | |
1,092,250 | - | Synpcc7942_1080 | 0.35 | +0.1 | |
1,092,274 | + | Synpcc7942_1080 | 0.37 | -1.3 | |
1,092,340 | - | Synpcc7942_1080 | 0.42 | -1.4 | |
1,092,705 | - | Synpcc7942_1080 | 0.69 | -1.1 | |
1,092,707 | - | Synpcc7942_1080 | 0.69 | -2.9 | |
1,092,740 | - | Synpcc7942_1080 | 0.71 | -3.7 | |
1,092,958 | + | Synpcc7942_1080 | 0.88 | -2.9 | |
1,092,958 | + | Synpcc7942_1080 | 0.88 | -2.9 | |
1,093,299 | + | Synpcc7942_1081 | 0.24 | -0.5 | |
1,093,490 | - | Synpcc7942_1081 | 0.51 | -2.3 | |
1,093,592 | - | Synpcc7942_1081 | 0.66 | +0.7 | |
1,093,611 | - | Synpcc7942_1081 | 0.68 | -1.4 | |
1,093,615 | + | Synpcc7942_1081 | 0.69 | -1.4 | |
1,093,760 | + | Synpcc7942_1081 | 0.90 | -0.1 | |
1,093,779 | + | -2.4 | |||
1,093,856 | + | -1.3 | |||
1,093,856 | + | +0.6 | |||
1,093,864 | - | -0.2 | |||
1,093,885 | + | -2.9 | |||
1,093,891 | - | +0.2 | |||
1,093,895 | + | -0.4 | |||
1,093,895 | - | +1.2 | |||
1,093,910 | - | +0.9 | |||
1,093,910 | - | -1.5 | |||
1,093,936 | + | +2.2 | |||
1,093,957 | - | -1.5 | |||
1,094,002 | - | +0.5 | |||
1,094,111 | + | -1.1 | |||
1,094,116 | - | +0.2 |
Or see this region's nucleotide sequence