Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1025

Experiment: D-Cycloserine 0.015625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.015625 mg/ml
1,038,180	-				-0.6
1,038,205	-				-0.5
1,038,205	-				-1.1
1,038,205	-				-0.9
1,038,207	+		Synpcc7942_1024	0.10	-0.1
1,038,235	+		Synpcc7942_1024	0.13	-1.1
1,038,241	-		Synpcc7942_1024	0.14	-0.5
1,038,241	-		Synpcc7942_1024	0.14	-0.7
1,038,241	-		Synpcc7942_1024	0.14	-1.1
1,038,241	-		Synpcc7942_1024	0.14	-1.7
1,038,241	-		Synpcc7942_1024	0.14	-0.1
1,038,244	+		Synpcc7942_1024	0.14	+2.0
1,038,244	+		Synpcc7942_1024	0.14	-0.3
1,038,251	-		Synpcc7942_1024	0.15	-0.1
1,038,252	-		Synpcc7942_1024	0.15	+0.2
1,038,252	-		Synpcc7942_1024	0.15	+1.9
1,038,290	+		Synpcc7942_1024	0.19	+0.8
1,038,292	+		Synpcc7942_1024	0.19	-0.2
1,038,310	+		Synpcc7942_1024	0.21	+1.1
1,038,321	-		Synpcc7942_1024	0.22	-0.8
1,038,325	+		Synpcc7942_1024	0.22	+0.2
1,038,325	+		Synpcc7942_1024	0.22	-2.1
1,038,325	+				+1.5
1,038,335	+		Synpcc7942_1024	0.23	+1.9
1,038,335	+		Synpcc7942_1024	0.23	+1.2
1,038,335	+		Synpcc7942_1024	0.23	+0.2
1,038,343	-		Synpcc7942_1024	0.24	-1.5
1,038,373	+		Synpcc7942_1024	0.27	-1.8
1,038,373	+		Synpcc7942_1024	0.27	-0.3
1,038,373	+		Synpcc7942_1024	0.27	+0.5
1,038,373	+		Synpcc7942_1024	0.27	-0.4
1,038,373	+		Synpcc7942_1024	0.27	+1.3
1,038,381	-		Synpcc7942_1024	0.28	-0.1
1,038,381	-		Synpcc7942_1024	0.28	+1.6
1,038,381	-		Synpcc7942_1024	0.28	+0.2
1,038,381	-		Synpcc7942_1024	0.28	+1.5
1,038,381	-		Synpcc7942_1024	0.28	-3.1
1,038,381	-		Synpcc7942_1024	0.28	-0.5
1,038,381	-		Synpcc7942_1024	0.28	+2.2
1,038,383	+		Synpcc7942_1024	0.28	+0.2
1,038,383	+		Synpcc7942_1024	0.28	+0.4
1,038,383	+		Synpcc7942_1024	0.28	+0.3
1,038,383	+		Synpcc7942_1024	0.28	+0.3
1,038,391	-		Synpcc7942_1024	0.29	-0.5
1,038,391	-		Synpcc7942_1024	0.29	+0.8
1,038,391	-		Synpcc7942_1024	0.29	+0.0
1,038,391	-		Synpcc7942_1024	0.29	+0.9
1,038,403	+		Synpcc7942_1024	0.30	+1.1
1,038,419	+		Synpcc7942_1024	0.32	+0.2
1,038,427	-		Synpcc7942_1024	0.32	+0.8
1,038,451	+		Synpcc7942_1024	0.35	+0.3
1,038,452	-		Synpcc7942_1024	0.35	+0.4
1,038,456	+		Synpcc7942_1024	0.35	-0.7
1,038,456	+		Synpcc7942_1024	0.35	+1.3
1,038,461	+		Synpcc7942_1024	0.36	+2.5
1,038,464	-		Synpcc7942_1024	0.36	-1.1
1,038,477	+		Synpcc7942_1024	0.37	-0.8
1,038,477	+		Synpcc7942_1024	0.37	+2.2
1,038,483	-		Synpcc7942_1024	0.38	-0.2
1,038,485	-		Synpcc7942_1024	0.38	+2.5
1,038,495	+		Synpcc7942_1024	0.39	+0.7
1,038,506	+		Synpcc7942_1024	0.40	+0.2
1,038,508	-		Synpcc7942_1024	0.40	+0.7
1,038,521	+		Synpcc7942_1024	0.42	-1.4
1,038,522	-		Synpcc7942_1024	0.42	+0.6
1,038,541	-		Synpcc7942_1024	0.44	+0.9
1,038,555	+		Synpcc7942_1024	0.45	+1.9
1,038,556	+		Synpcc7942_1024	0.45	+0.1
1,038,556	+		Synpcc7942_1024	0.45	-0.7
1,038,564	-		Synpcc7942_1024	0.46	-1.3
1,038,564	-		Synpcc7942_1024	0.46	+0.1
1,038,564	-		Synpcc7942_1024	0.46	+0.5
1,038,567	-		Synpcc7942_1024	0.46	-0.6
1,038,571	+		Synpcc7942_1024	0.47	+0.4
1,038,571	+		Synpcc7942_1024	0.47	-0.7
1,038,571	+		Synpcc7942_1024	0.47	+0.4
1,038,576	+		Synpcc7942_1024	0.47	-0.1
1,038,579	-		Synpcc7942_1024	0.48	+0.1
1,038,579	-		Synpcc7942_1024	0.48	-0.8
1,038,579	-		Synpcc7942_1024	0.48	+0.0
1,038,579	-		Synpcc7942_1024	0.48	+0.3
1,038,579	-		Synpcc7942_1024	0.48	+0.9
1,038,584	-		Synpcc7942_1024	0.48	+0.5
1,038,587	+		Synpcc7942_1024	0.48	+0.1
1,038,595	-		Synpcc7942_1024	0.49	-0.1
1,038,602	+		Synpcc7942_1024	0.50	+3.1
1,038,610	-		Synpcc7942_1024	0.51	-1.0
1,038,616	+		Synpcc7942_1024	0.51	-0.1
1,038,624	-		Synpcc7942_1024	0.52	+0.2
1,038,630	+		Synpcc7942_1024	0.53	+0.5
1,038,631	-		Synpcc7942_1024	0.53	+0.4
1,038,631	-		Synpcc7942_1024	0.53	-0.1
1,038,651	+		Synpcc7942_1024	0.55	+0.1
1,038,659	-		Synpcc7942_1024	0.56	+0.4
1,038,670	-		Synpcc7942_1024	0.57	+0.1
1,038,675	-		Synpcc7942_1024	0.57	-1.1
1,038,761	-		Synpcc7942_1024	0.66	+1.0
1,038,768	-		Synpcc7942_1024	0.67	+0.9
1,038,768	-		Synpcc7942_1024	0.67	-0.1
1,038,788	+		Synpcc7942_1024	0.69	-0.1
1,038,796	-		Synpcc7942_1024	0.69	+0.3
1,038,822	+		Synpcc7942_1024	0.72	+1.2
1,038,822	+		Synpcc7942_1024	0.72	-1.1
1,038,822	+		Synpcc7942_1024	0.72	+1.2
1,038,822	+		Synpcc7942_1024	0.72	-0.4
1,038,822	-		Synpcc7942_1024	0.72	-0.7
1,038,845	-		Synpcc7942_1024	0.74	+1.2
1,038,845	-		Synpcc7942_1024	0.74	+1.5
1,038,923	-		Synpcc7942_1024	0.82	+0.1
1,038,928	-		Synpcc7942_1024	0.83	+1.5
1,038,933	-		Synpcc7942_1024	0.83	+0.1
1,038,967	+		Synpcc7942_1024	0.87	-0.5
1,039,006	+				-2.3
1,039,006	+				+0.7
1,039,006	-				+0.9
1,039,019	-				+1.1
1,039,019	-				-2.4
1,039,059	+				+0.1
1,039,067	-				+0.2
1,039,067	-				-0.1
1,039,089	-				-1.1
1,039,096	-				+0.6
1,039,097	+				-0.6
1,039,113	+				-1.1
1,039,113	+				-1.1
1,039,113	+				+0.8
1,039,121	-				+0.2
1,039,121	-				+2.2
1,039,121	-				-0.2
1,039,126	-				-0.7
1,039,134	+				+0.4
1,039,142	-				+1.6
1,039,144	+				+1.1
1,039,154	-				+0.3
1,039,166	+				+1.7
1,039,206	+				+0.2
1,039,227	-		Synpcc7942_1025	0.13	+1.4
1,039,298	-		Synpcc7942_1025	0.28	-2.1
1,039,302	-		Synpcc7942_1025	0.28	+1.2
1,039,350	+		Synpcc7942_1025	0.39	+0.8
1,039,358	-		Synpcc7942_1025	0.40	+1.5
1,039,358	-		Synpcc7942_1025	0.40	+1.5
1,039,393	-		Synpcc7942_1025	0.48	-2.1
1,039,411	+		Synpcc7942_1025	0.52	-2.8
1,039,419	-				+0.9
1,039,421	+		Synpcc7942_1025	0.54	-1.7
1,039,421	+		Synpcc7942_1025	0.54	-0.4
1,039,423	-		Synpcc7942_1025	0.54	-0.9
1,039,429	-		Synpcc7942_1025	0.55	+0.5
1,039,436	+		Synpcc7942_1025	0.57	+0.4
1,039,445	+		Synpcc7942_1025	0.59	+0.9
1,039,451	-		Synpcc7942_1025	0.60	+1.2
1,039,453	+		Synpcc7942_1025	0.61	+3.2
1,039,488	+		Synpcc7942_1025	0.68	+1.9
1,039,510	+		Synpcc7942_1025	0.73	-1.9
1,039,536	+		Synpcc7942_1025	0.78	-0.1
1,039,544	-		Synpcc7942_1025	0.80	+0.7
1,039,606	-				-0.6
1,039,627	+				+1.9
1,039,632	+				+1.4
1,039,632	+				+1.3
1,039,640	-				+3.4
1,039,640	-				+0.0
1,039,640	-				-0.7
1,039,640	-				+0.0
1,039,640	-				+0.3
1,039,674	+				+0.7
1,039,682	+				-0.1
1,039,682	-				+0.4
1,039,682	-				-0.4
1,039,690	-				-0.7
1,039,690	-				+1.5
1,039,731	+				-1.1
1,039,731	+				+1.3
1,039,741	+				-0.1
1,039,741	+				-0.4
1,039,746	-				-1.4
1,039,752	+				-0.5
1,039,817	-				-1.1
1,039,996	+				-1.4
1,040,021	+				-0.1
1,040,029	-				-0.1
1,040,040	-				-0.4
1,040,048	+				-0.1
1,040,068	+				-1.1
1,040,108	-				-0.1
1,040,133	+				+0.6
1,040,156	-		Synpcc7942_1026	0.11	-0.0
1,040,168	-		Synpcc7942_1026	0.11	-1.6
1,040,168	-		Synpcc7942_1026	0.11	-1.5
1,040,170	+		Synpcc7942_1026	0.11	-0.1
1,040,170	+		Synpcc7942_1026	0.11	-2.5
1,040,212	+		Synpcc7942_1026	0.14	+0.4
1,040,217	+		Synpcc7942_1026	0.14	-0.8
1,040,217	+		Synpcc7942_1026	0.14	-0.5
1,040,225	-		Synpcc7942_1026	0.14	-3.5
1,040,225	-		Synpcc7942_1026	0.14	-0.4
1,040,273	-		Synpcc7942_1026	0.17	-0.8
1,040,280	+		Synpcc7942_1026	0.18	+0.0
1,040,345	+		Synpcc7942_1026	0.21	-0.1
1,040,345	+		Synpcc7942_1026	0.21	-2.6
1,040,378	+		Synpcc7942_1026	0.23	+0.6
1,040,383	+		Synpcc7942_1026	0.23	-0.4
1,040,383	+		Synpcc7942_1026	0.23	-1.4
1,040,383	+		Synpcc7942_1026	0.23	-0.7
1,040,391	-		Synpcc7942_1026	0.24	-0.7
1,040,391	-		Synpcc7942_1026	0.24	-1.6
1,040,391	-		Synpcc7942_1026	0.24	-2.7
1,040,391	-		Synpcc7942_1026	0.24	-0.8
1,040,391	-		Synpcc7942_1026	0.24	-0.1
1,040,391	-		Synpcc7942_1026	0.24	+0.2
1,040,407	+		Synpcc7942_1026	0.25	+0.8
1,040,432	+		Synpcc7942_1026	0.26	+0.9
1,040,440	-		Synpcc7942_1026	0.27	+0.6
1,040,443	-		Synpcc7942_1026	0.27	+0.3
1,040,469	+		Synpcc7942_1026	0.28	-1.1
1,040,469	+		Synpcc7942_1026	0.28	-0.1
1,040,469	+		Synpcc7942_1026	0.28	+0.2
1,040,469	+		Synpcc7942_1026	0.28	-0.1
1,040,477	-		Synpcc7942_1026	0.29	-1.5
1,040,477	-		Synpcc7942_1026	0.29	-0.8
1,040,477	-		Synpcc7942_1026	0.29	+1.0
1,040,477	-		Synpcc7942_1026	0.29	-1.7
1,040,477	-		Synpcc7942_1026	0.29	-3.0
1,040,477	-		Synpcc7942_1026	0.29	-2.2
1,040,477	-				-1.4
1,040,479	+		Synpcc7942_1026	0.29	-2.3
1,040,499	-		Synpcc7942_1026	0.30	-1.7
1,040,530	+		Synpcc7942_1026	0.32	-0.1
1,040,602	-		Synpcc7942_1026	0.36	+0.9
1,040,620	+		Synpcc7942_1026	0.37	+0.9
1,040,638	+				-2.1