Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_0039

Experiment: D-Cycloserine 0.015625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.015625 mg/ml
36,142	-				+1.0
36,218	+		Synpcc7942_0037	0.47	+1.2
36,280	-		Synpcc7942_0037	0.77	+0.5
36,287	-		Synpcc7942_0037	0.80	+1.6
36,403	-				+1.9
36,413	-				-0.3
36,416	+				+0.1
36,419	-				+0.4
36,426	+				-0.3
36,429	-				+0.2
36,505	+				-0.5
36,518	-				-0.4
36,537	+	mutT	Synpcc7942_0038	0.12	-0.3
36,552	+	mutT	Synpcc7942_0038	0.15	+1.5
36,562	-	mutT	Synpcc7942_0038	0.17	+1.4
36,563	-	mutT	Synpcc7942_0038	0.18	-0.1
36,755	+	mutT	Synpcc7942_0038	0.58	-0.1
36,794	+	mutT	Synpcc7942_0038	0.66	+1.2
36,837	-	mutT	Synpcc7942_0038	0.75	-0.5
36,855	+	mutT	Synpcc7942_0038	0.79	+0.0
36,855	+	mutT	Synpcc7942_0038	0.79	+1.1
36,863	-	mutT	Synpcc7942_0038	0.81	+0.1
36,863	-	mutT	Synpcc7942_0038	0.81	-1.8
36,863	-	mutT	Synpcc7942_0038	0.81	+1.3
36,863	-	mutT	Synpcc7942_0038	0.81	-0.1
36,907	+	mutT	Synpcc7942_0038	0.90	+0.9
36,915	-				-0.8
36,938	-				-1.1
36,938	-				-0.1
36,938	-				-0.0
36,957	-				-1.9
37,016	-				+0.3
37,061	-				-2.4
37,092	+				-2.7
37,144	-				+0.5
37,152	-				-2.9
37,220	+				-1.7
37,220	+				-2.1
37,220	+				-1.7
37,220	+				-0.1
37,220	+				-1.7
37,228	-				-1.1
37,228	-				-1.7
37,228	-				-3.3
37,228	-				-1.1
37,252	+				-0.1
37,260	-				-1.7
37,274	+	gnd	Synpcc7942_0039	0.10	-0.1
37,301	+	gnd	Synpcc7942_0039	0.12	-0.1
37,359	-	gnd	Synpcc7942_0039	0.16	-0.1
37,423	-	gnd	Synpcc7942_0039	0.21	-1.7
37,472	-	gnd	Synpcc7942_0039	0.24	-0.1
37,528	-	gnd	Synpcc7942_0039	0.28	-1.1
37,591	-	gnd	Synpcc7942_0039	0.33	-0.1
37,605	+	gnd	Synpcc7942_0039	0.34	-0.1
37,608	-	gnd	Synpcc7942_0039	0.34	-1.7
37,659	+	gnd	Synpcc7942_0039	0.37	-0.1
37,669	-	gnd	Synpcc7942_0039	0.38	-0.1
37,692	+	gnd	Synpcc7942_0039	0.40	-2.1
37,700	-	gnd	Synpcc7942_0039	0.40	-1.1
37,727	+	gnd	Synpcc7942_0039	0.42	-0.1
37,727	+	gnd	Synpcc7942_0039	0.42	+0.5
37,728	+	gnd	Synpcc7942_0039	0.42	-0.1
37,738	+	gnd	Synpcc7942_0039	0.43	-2.1
37,756	+	gnd	Synpcc7942_0039	0.44	-1.1
37,781	-	gnd	Synpcc7942_0039	0.46	-1.1
37,790	+	gnd	Synpcc7942_0039	0.47	-2.4
37,985	+	gnd	Synpcc7942_0039	0.60	-2.7
37,995	+	gnd	Synpcc7942_0039	0.61	-1.1
38,008	-	gnd	Synpcc7942_0039	0.62	-1.1
38,073	-	gnd	Synpcc7942_0039	0.67	-2.4
38,092	+	gnd	Synpcc7942_0039	0.68	-0.1
38,098	-	gnd	Synpcc7942_0039	0.68	-1.7
38,119	-	gnd	Synpcc7942_0039	0.70	-1.7
38,144	-	gnd	Synpcc7942_0039	0.72	-1.1
38,161	+	gnd	Synpcc7942_0039	0.73	-0.1
38,185	-	gnd	Synpcc7942_0039	0.75	-0.1
38,215	+	gnd	Synpcc7942_0039	0.77	-2.1
38,259	+	gnd	Synpcc7942_0039	0.80	-2.4
38,267	-	gnd	Synpcc7942_0039	0.80	-4.4
38,269	+	gnd	Synpcc7942_0039	0.80	-1.7
38,277	-	gnd	Synpcc7942_0039	0.81	-1.1
38,313	-	gnd	Synpcc7942_0039	0.84	-0.1
38,411	+				+0.9
38,447	-				-0.1
38,469	-				-1.1
38,521	-				-0.1
38,539	-				-1.4
38,547	-				-1.4
38,547	-				-0.1
38,549	+				-1.1
38,571	+				+0.0
38,571	+				-0.1
38,571	+				-0.8
38,571	+				-0.1
38,579	-				+0.5
38,579	-				-0.1
38,598	+				-2.4
38,616	-				-0.1
38,616	-				+0.2
39,018	+				-0.8
39,027	-				-1.3
39,027	-				-0.1
39,041	-				+0.9
39,327	+				-0.1
39,334	+				-0.1
39,334	+				-0.6
39,342	-				-1.7
39,342	-				+0.0
39,342	-				+0.1
39,378	+				+0.0
39,378	+				-0.7
39,386	-				+0.2
39,396	-				+0.6
39,398	-				-0.3
39,415	+				-0.6
39,438	+				+0.3
39,454	-				-2.9
39,464	-				-0.4
39,464	-				-1.1
39,499	+				-0.4
39,499	+				+1.2
39,499	+				-1.1
39,507	-				+0.3
39,507	-				-1.5
39,507	-				-0.3
39,533	+				-0.1
39,536	-				-0.4
39,543	+				-0.6