Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3027

Experiment: Putrescine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Putrescine (C)
3,403,335	-				+1.6
3,403,366	+				-1.5
3,403,366	+				+0.1
3,403,366	+				+1.4
3,403,367	-				-0.9
3,403,367	-				-0.9
3,403,367	-				-0.9
3,403,411	+				+2.1
3,403,411	+				-0.1
3,403,411	+				+2.1
3,403,411	+				+1.8
3,403,411	+				+2.1
3,403,411	+				-0.9
3,403,412	-				+1.6
3,403,412	-				-0.9
3,403,412	-				-1.5
3,403,412	-				-0.3
3,403,463	+		Pf1N1B4_3026	0.10	-1.5
3,403,489	+		Pf1N1B4_3026	0.13	+1.1
3,403,490	-		Pf1N1B4_3026	0.13	-0.4
3,403,665	+		Pf1N1B4_3026	0.31	-0.8
3,403,666	-		Pf1N1B4_3026	0.31	+0.2
3,403,666	-		Pf1N1B4_3026	0.31	-0.8
3,403,732	+		Pf1N1B4_3026	0.38	+1.1
3,403,733	-		Pf1N1B4_3026	0.39	-0.5
3,403,733	-		Pf1N1B4_3026	0.39	-1.9
3,403,888	+		Pf1N1B4_3026	0.55	-0.3
3,403,903	+		Pf1N1B4_3026	0.56	-0.4
3,403,903	+		Pf1N1B4_3026	0.56	-0.5
3,403,903	+		Pf1N1B4_3026	0.56	+0.5
3,403,904	-		Pf1N1B4_3026	0.57	-1.8
3,403,904	-		Pf1N1B4_3026	0.57	-0.2
3,403,904	-		Pf1N1B4_3026	0.57	-0.6
3,403,936	+		Pf1N1B4_3026	0.60	-0.0
3,403,967	-		Pf1N1B4_3026	0.63	+0.5
3,403,978	+		Pf1N1B4_3026	0.64	+1.1
3,403,978	+		Pf1N1B4_3026	0.64	-0.6
3,403,978	+		Pf1N1B4_3026	0.64	-1.5
3,403,978	+		Pf1N1B4_3026	0.64	+2.1
3,403,978	+		Pf1N1B4_3026	0.64	+0.8
3,403,978	+		Pf1N1B4_3026	0.64	+0.6
3,403,978	+		Pf1N1B4_3026	0.64	+1.4
3,403,978	+				-1.5
3,403,979	-		Pf1N1B4_3026	0.64	-1.4
3,403,979	-		Pf1N1B4_3026	0.64	-0.5
3,403,979	-		Pf1N1B4_3026	0.64	-0.1
3,403,979	-		Pf1N1B4_3026	0.64	-1.2
3,403,979	-		Pf1N1B4_3026	0.64	+1.6
3,403,982	-		Pf1N1B4_3026	0.65	-0.5
3,403,982	-		Pf1N1B4_3026	0.65	+1.1
3,404,140	+		Pf1N1B4_3026	0.81	-0.9
3,404,140	+		Pf1N1B4_3026	0.81	-0.4
3,404,140	+		Pf1N1B4_3026	0.81	-0.4
3,404,140	+		Pf1N1B4_3026	0.81	-1.5
3,404,141	-				+0.1
3,404,179	+		Pf1N1B4_3026	0.86	-0.5
3,404,179	+		Pf1N1B4_3026	0.86	-1.3
3,404,227	+				+1.6
3,404,227	+				-0.5
3,404,227	+				-1.4
3,404,228	-				+1.1
3,404,228	-				+0.4
3,404,245	+				+0.4
3,404,687	+		Pf1N1B4_3027	0.33	-0.5
3,404,687	+		Pf1N1B4_3027	0.33	-0.7
3,404,687	+		Pf1N1B4_3027	0.33	-0.4
3,404,687	+		Pf1N1B4_3027	0.33	-0.4
3,404,688	-		Pf1N1B4_3027	0.33	+0.6
3,404,964	+		Pf1N1B4_3027	0.58	-0.4
3,405,076	+		Pf1N1B4_3027	0.68	+0.3
3,405,076	+		Pf1N1B4_3027	0.68	-1.3
3,405,076	+		Pf1N1B4_3027	0.68	-0.1
3,405,077	-		Pf1N1B4_3027	0.68	-2.3
3,405,077	-		Pf1N1B4_3027	0.68	-1.3
3,405,117	+		Pf1N1B4_3027	0.71	-0.5
3,405,117	+				+0.1
3,405,118	-		Pf1N1B4_3027	0.72	+0.4
3,405,118	-		Pf1N1B4_3027	0.72	-0.4
3,405,118	-		Pf1N1B4_3027	0.72	+0.1
3,405,118	-		Pf1N1B4_3027	0.72	-0.5
3,405,168	+		Pf1N1B4_3027	0.76	-0.5
3,405,560	-				+0.1
3,405,570	+				-0.2
3,405,570	+				-0.5
3,405,570	+				-0.5
3,405,570	+				+0.3
3,405,570	+				-0.1
3,405,570	+				+1.6
3,405,570	+				-0.2
3,405,571	-				+0.8
3,405,571	-				+0.3
3,405,571	-				+0.1
3,405,571	-				+0.8
3,405,571	-				+0.6
3,405,571	-				+1.4
3,405,571	-				+0.5
3,405,571	-				+0.1
3,405,571	-				+1.1
3,405,590	-				+0.1
3,405,591	+				-2.1
3,405,591	+				-1.5
3,405,591	+				+0.1
3,405,592	-				+0.6
3,405,592	-				+0.1
3,405,703	+		Pf1N1B4_3028	0.14	+1.1
3,405,704	-		Pf1N1B4_3028	0.14	+0.4
3,405,792	+				+0.1
3,405,793	-		Pf1N1B4_3028	0.22	-2.3
3,406,038	+		Pf1N1B4_3028	0.43	-0.9
3,406,039	-		Pf1N1B4_3028	0.43	+0.1
3,406,039	-		Pf1N1B4_3028	0.43	+1.8
3,406,059	+		Pf1N1B4_3028	0.45	-0.4
3,406,101	+		Pf1N1B4_3028	0.48	-0.3
3,406,101	+		Pf1N1B4_3028	0.48	-0.4
3,406,101	+		Pf1N1B4_3028	0.48	-0.2
3,406,122	+		Pf1N1B4_3028	0.50	+0.2
3,406,122	+		Pf1N1B4_3028	0.50	+1.1
3,406,122	+		Pf1N1B4_3028	0.50	-0.5
3,406,122	+		Pf1N1B4_3028	0.50	-1.8
3,406,123	-		Pf1N1B4_3028	0.50	-1.5
3,406,123	-		Pf1N1B4_3028	0.50	-1.5
3,406,123	-		Pf1N1B4_3028	0.50	+1.0
3,406,137	+		Pf1N1B4_3028	0.51	-0.7
3,406,138	-		Pf1N1B4_3028	0.51	-1.2
3,406,138	-		Pf1N1B4_3028	0.51	+0.1
3,406,138	-		Pf1N1B4_3028	0.51	+0.4
3,406,210	+				-0.9
3,406,210	+		Pf1N1B4_3028	0.58	-2.1
3,406,211	-				+0.5
3,406,211	-		Pf1N1B4_3028	0.58	+0.1
3,406,239	+		Pf1N1B4_3028	0.60	+0.1
3,406,240	-		Pf1N1B4_3028	0.60	+0.9
3,406,240	-		Pf1N1B4_3028	0.60	+0.6
3,406,240	-				-0.5
3,406,240	-				+0.1
3,406,240	-		Pf1N1B4_3028	0.60	+0.8
3,406,240	-		Pf1N1B4_3028	0.60	-0.5
3,406,240	-		Pf1N1B4_3028	0.60	+2.4
3,406,240	-				+0.1
3,406,240	-		Pf1N1B4_3028	0.60	+0.5
3,406,279	-		Pf1N1B4_3028	0.64	-0.9
3,406,297	+				+0.1
3,406,297	+		Pf1N1B4_3028	0.65	+1.1
3,406,297	+		Pf1N1B4_3028	0.65	-1.5
3,406,297	+		Pf1N1B4_3028	0.65	+0.5
3,406,297	+		Pf1N1B4_3028	0.65	+0.5
3,406,297	+		Pf1N1B4_3028	0.65	+0.2
3,406,297	+		Pf1N1B4_3028	0.65	-0.9
3,406,297	+		Pf1N1B4_3028	0.65	-2.1
3,406,297	+				+0.1
3,406,298	-		Pf1N1B4_3028	0.65	+1.6
3,406,299	+		Pf1N1B4_3028	0.65	-0.9
3,406,299	+		Pf1N1B4_3028	0.65	-2.3
3,406,299	+		Pf1N1B4_3028	0.65	+1.3
3,406,299	+				+1.1
3,406,299	+		Pf1N1B4_3028	0.65	+0.1
3,406,299	+		Pf1N1B4_3028	0.65	-0.9
3,406,299	+		Pf1N1B4_3028	0.65	-0.6
3,406,299	+		Pf1N1B4_3028	0.65	+1.4
3,406,299	+		Pf1N1B4_3028	0.65	-0.5
3,406,300	-				+0.1
3,406,300	-		Pf1N1B4_3028	0.66	-0.4
3,406,300	-		Pf1N1B4_3028	0.66	+0.3
3,406,300	-		Pf1N1B4_3028	0.66	-1.1
3,406,300	-		Pf1N1B4_3028	0.66	-1.5
3,406,300	-		Pf1N1B4_3028	0.66	+0.1
3,406,300	-		Pf1N1B4_3028	0.66	+0.5
3,406,358	-		Pf1N1B4_3028	0.71	-1.3
3,406,358	-		Pf1N1B4_3028	0.71	-0.5