Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2779

Experiment: Putrescine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Putrescine (C)
3,120,708	-				-0.4
3,120,708	-				-0.8
3,120,708	-				-1.2
3,120,716	+				-0.2
3,120,716	+				-1.4
3,120,716	+				+0.2
3,120,717	-				-1.4
3,120,717	-				-0.4
3,120,982	+				+2.2
3,120,983	-				-0.8
3,121,187	-				+1.5
3,121,187	-				-0.6
3,121,187	-				-0.8
3,121,187	-				+0.6
3,121,187	-				+0.1
3,121,628	-				+0.2
3,121,628	-		Pf1N1B4_2779	0.19	-1.8
3,121,630	+		Pf1N1B4_2779	0.19	+1.0
3,121,630	+		Pf1N1B4_2779	0.19	-1.0
3,121,631	-		Pf1N1B4_2779	0.19	+0.6
3,121,631	-		Pf1N1B4_2779	0.19	-0.4
3,121,631	-		Pf1N1B4_2779	0.19	+1.8
3,121,721	-				-0.4
3,121,721	-		Pf1N1B4_2779	0.21	+0.2
3,121,721	-		Pf1N1B4_2779	0.21	-1.1
3,121,721	-		Pf1N1B4_2779	0.21	+1.0
3,121,759	+		Pf1N1B4_2779	0.22	+0.2
3,121,760	-		Pf1N1B4_2779	0.22	-0.8
3,121,760	-		Pf1N1B4_2779	0.22	-0.1
3,122,045	+		Pf1N1B4_2779	0.30	+0.8
3,122,045	+		Pf1N1B4_2779	0.30	+1.2
3,122,045	+		Pf1N1B4_2779	0.30	+0.9
3,122,045	+		Pf1N1B4_2779	0.30	-0.4
3,122,046	-		Pf1N1B4_2779	0.30	-0.2
3,122,209	+		Pf1N1B4_2779	0.34	-0.1
3,122,210	-		Pf1N1B4_2779	0.34	-0.7
3,122,210	-		Pf1N1B4_2779	0.34	-2.0
3,122,210	-		Pf1N1B4_2779	0.34	-0.8
3,122,212	+		Pf1N1B4_2779	0.34	-0.1
3,122,213	-		Pf1N1B4_2779	0.34	-0.4
3,122,278	+		Pf1N1B4_2779	0.36	-0.6
3,122,278	+		Pf1N1B4_2779	0.36	+1.8
3,122,278	+		Pf1N1B4_2779	0.36	-0.8
3,122,278	+		Pf1N1B4_2779	0.36	+1.8
3,122,278	+		Pf1N1B4_2779	0.36	+2.2
3,122,278	+		Pf1N1B4_2779	0.36	+0.2
3,122,279	-		Pf1N1B4_2779	0.36	+0.2
3,122,279	-		Pf1N1B4_2779	0.36	+0.7
3,122,279	-		Pf1N1B4_2779	0.36	+0.3
3,122,279	-		Pf1N1B4_2779	0.36	-0.6
3,122,279	-		Pf1N1B4_2779	0.36	+0.9
3,122,315	+		Pf1N1B4_2779	0.37	-0.2
3,122,336	-		Pf1N1B4_2779	0.37	+0.2
3,122,336	-		Pf1N1B4_2779	0.37	-1.1
3,122,410	+		Pf1N1B4_2779	0.39	+0.2
3,122,410	+		Pf1N1B4_2779	0.39	-0.8
3,122,410	+		Pf1N1B4_2779	0.39	-0.1
3,122,411	-		Pf1N1B4_2779	0.39	+1.2
3,122,450	+		Pf1N1B4_2779	0.40	+0.8
3,122,486	-		Pf1N1B4_2779	0.41	+0.6
3,122,752	-		Pf1N1B4_2779	0.48	-0.5
3,122,821	+				+0.2
3,122,821	+				+1.2
3,122,822	-		Pf1N1B4_2779	0.50	-0.8
3,122,822	-		Pf1N1B4_2779	0.50	+1.5
3,122,926	+		Pf1N1B4_2779	0.53	+0.2
3,122,926	+		Pf1N1B4_2779	0.53	-1.8
3,123,178	+		Pf1N1B4_2779	0.59	+0.3
3,123,179	-				-2.1
3,123,214	+		Pf1N1B4_2779	0.60	+2.8
3,123,214	+		Pf1N1B4_2779	0.60	-0.2
3,123,215	-		Pf1N1B4_2779	0.60	-2.4
3,123,215	-		Pf1N1B4_2779	0.60	-0.8
3,123,218	-		Pf1N1B4_2779	0.60	+0.4
3,123,256	+		Pf1N1B4_2779	0.61	+0.6
3,123,256	+		Pf1N1B4_2779	0.61	-1.2
3,123,342	+		Pf1N1B4_2779	0.64	-1.4
3,123,342	+		Pf1N1B4_2779	0.64	-0.1
3,123,342	+		Pf1N1B4_2779	0.64	-0.6
3,123,342	+		Pf1N1B4_2779	0.64	-1.4
3,123,342	+		Pf1N1B4_2779	0.64	-0.4
3,123,342	+		Pf1N1B4_2779	0.64	+1.0
3,123,342	+		Pf1N1B4_2779	0.64	+0.2
3,123,342	+		Pf1N1B4_2779	0.64	+0.2
3,123,343	-		Pf1N1B4_2779	0.64	+1.2
3,123,343	-		Pf1N1B4_2779	0.64	-0.2
3,123,343	-		Pf1N1B4_2779	0.64	-0.8
3,123,343	-		Pf1N1B4_2779	0.64	+0.6
3,123,351	+		Pf1N1B4_2779	0.64	+0.2
3,123,351	+		Pf1N1B4_2779	0.64	+1.2
3,123,351	+		Pf1N1B4_2779	0.64	+0.2
3,123,351	+		Pf1N1B4_2779	0.64	+1.2
3,123,352	-		Pf1N1B4_2779	0.64	-0.8
3,123,352	-		Pf1N1B4_2779	0.64	+1.8
3,123,352	-		Pf1N1B4_2779	0.64	+1.2
3,123,352	-		Pf1N1B4_2779	0.64	-0.4
3,123,352	-		Pf1N1B4_2779	0.64	+0.4
3,123,352	-		Pf1N1B4_2779	0.64	+0.7
3,123,352	-		Pf1N1B4_2779	0.64	+0.6
3,123,352	-		Pf1N1B4_2779	0.64	+0.2
3,123,352	-		Pf1N1B4_2779	0.64	-0.8
3,123,352	-		Pf1N1B4_2779	0.64	+2.2
3,123,355	+		Pf1N1B4_2779	0.64	+0.8
3,123,355	+		Pf1N1B4_2779	0.64	-0.3
3,123,355	+		Pf1N1B4_2779	0.64	+1.2
3,123,355	+		Pf1N1B4_2779	0.64	+0.2
3,123,355	+		Pf1N1B4_2779	0.64	+0.8
3,123,355	+		Pf1N1B4_2779	0.64	+0.4
3,123,355	+		Pf1N1B4_2779	0.64	-0.4
3,123,355	+		Pf1N1B4_2779	0.64	+0.8
3,123,355	+		Pf1N1B4_2779	0.64	+0.5
3,123,355	+		Pf1N1B4_2779	0.64	+1.2
3,123,355	+		Pf1N1B4_2779	0.64	-0.0
3,123,355	+		Pf1N1B4_2779	0.64	-0.8
3,123,356	-		Pf1N1B4_2779	0.64	+0.2
3,123,356	-				+0.2
3,123,356	-		Pf1N1B4_2779	0.64	-0.6
3,123,356	-		Pf1N1B4_2779	0.64	-0.8
3,123,356	-		Pf1N1B4_2779	0.64	+0.3
3,123,356	-		Pf1N1B4_2779	0.64	+0.8
3,123,356	-		Pf1N1B4_2779	0.64	+1.8
3,123,356	-		Pf1N1B4_2779	0.64	+1.2
3,123,356	-		Pf1N1B4_2779	0.64	-0.1
3,123,356	-		Pf1N1B4_2779	0.64	+1.2
3,123,472	+		Pf1N1B4_2779	0.67	+0.8
3,123,502	-		Pf1N1B4_2779	0.68	-0.8
3,123,800	+		Pf1N1B4_2779	0.76	-0.6
3,123,800	+		Pf1N1B4_2779	0.76	+0.7
3,123,800	+		Pf1N1B4_2779	0.76	-0.4
3,123,801	-		Pf1N1B4_2779	0.76	+2.2
3,123,865	+		Pf1N1B4_2779	0.77	+0.9
3,123,866	-		Pf1N1B4_2779	0.77	+0.0
3,124,306	+		Pf1N1B4_2779	0.89	-0.6
3,124,306	+		Pf1N1B4_2779	0.89	+0.0
3,124,307	-		Pf1N1B4_2779	0.89	-0.8
3,124,307	-		Pf1N1B4_2779	0.89	-0.1
3,124,348	+				-1.4
3,124,349	-				-0.3
3,124,500	+				-0.2
3,124,582	+				+0.6
3,124,582	+				+1.4
3,124,582	+				+0.2
3,124,583	-				+2.0
3,124,748	+				+0.2
3,124,748	+				+2.0
3,124,749	-				+0.2
3,124,759	+				-0.1
3,124,759	+				-0.0
3,124,760	-				-0.8
3,124,796	+				+1.0
3,124,796	+				-0.6
3,124,796	+				+0.8
3,124,796	+				+0.2
3,124,796	+				-1.4
3,124,796	+				+1.5
3,124,796	+				-2.1
3,124,797	-				+0.6
3,124,797	-				-1.0
3,124,797	-				-0.3
3,124,798	+				+0.4
3,124,799	-				+0.5
3,124,799	-				-1.1
3,124,799	-				+1.2
3,124,822	+				+0.5
3,124,877	+				-0.4
3,124,877	+				+0.8
3,124,877	+				+0.2
3,124,883	+				+0.8
3,124,883	+				+0.2
3,124,883	+				+0.7
3,124,888	+				+1.2
3,124,888	+				-0.2
3,124,888	+				+0.7
3,124,923	+				+0.2
3,124,923	+				+0.7
3,124,952	+				+0.2