Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2259

Experiment: Putrescine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Putrescine (C)
2,574,025	+		Pf1N1B4_2257	0.47	-0.2
2,574,069	+		Pf1N1B4_2257	0.50	-1.6
2,574,187	+		Pf1N1B4_2257	0.60	-0.6
2,574,187	+		Pf1N1B4_2257	0.60	-2.2
2,574,187	+		Pf1N1B4_2257	0.60	-0.2
2,574,220	+		Pf1N1B4_2257	0.63	-3.1
2,574,220	+		Pf1N1B4_2257	0.63	-0.4
2,574,221	-		Pf1N1B4_2257	0.63	-2.6
2,574,221	-		Pf1N1B4_2257	0.63	-0.0
2,574,295	+		Pf1N1B4_2257	0.69	-2.0
2,574,296	-		Pf1N1B4_2257	0.69	-2.0
2,574,296	-		Pf1N1B4_2257	0.69	-0.6
2,574,346	+				-1.6
2,574,346	+		Pf1N1B4_2257	0.73	+0.4
2,574,347	-		Pf1N1B4_2257	0.73	+0.4
2,574,347	-		Pf1N1B4_2257	0.73	-1.5
2,574,347	-		Pf1N1B4_2257	0.73	-1.6
2,574,347	-		Pf1N1B4_2257	0.73	-1.0
2,574,347	-		Pf1N1B4_2257	0.73	-1.0
2,574,348	+		Pf1N1B4_2257	0.73	+2.7
2,574,349	-		Pf1N1B4_2257	0.74	+0.4
2,574,430	+		Pf1N1B4_2257	0.80	-0.5
2,574,431	-		Pf1N1B4_2257	0.80	-1.0
2,574,477	+		Pf1N1B4_2257	0.84	+1.0
2,574,477	+		Pf1N1B4_2257	0.84	-0.2
2,574,529	+		Pf1N1B4_2257	0.89	-1.0
2,574,529	+		Pf1N1B4_2257	0.89	+2.7
2,574,529	+		Pf1N1B4_2257	0.89	-0.2
2,574,530	-		Pf1N1B4_2257	0.89	-1.0
2,574,530	-		Pf1N1B4_2257	0.89	-1.2
2,574,749	+		Pf1N1B4_2258	0.52	-0.6
2,574,749	+		Pf1N1B4_2258	0.52	+1.7
2,574,750	-		Pf1N1B4_2258	0.53	-1.0
2,574,825	+				+1.6
2,574,825	+				+1.5
2,574,826	-				+0.8
2,574,826	-				-1.4
2,574,826	-				-2.2
2,574,832	+				-1.2
2,574,833	-				-1.2
2,574,833	-				-0.5
2,574,833	-				-0.2
2,574,924	+				+0.2
2,574,969	+				+0.1
2,575,005	+				-0.6
2,575,005	+				-0.9
2,575,005	+				+0.6
2,575,005	+				+0.6
2,575,005	+				-1.6
2,575,005	+				-0.4
2,575,005	+				-0.4
2,575,006	-				-0.6
2,575,006	-				+2.0
2,575,006	-				-1.7
2,575,006	-				-2.0
2,575,006	-				+0.0
2,575,006	-				+0.4
2,575,006	-				+0.7
2,575,006	-				-0.4
2,575,009	+				-0.4
2,575,009	+				+3.0
2,575,010	-				-0.2
2,575,010	-				-1.2
2,575,010	-				-1.8
2,575,017	+				+0.0
2,575,017	+				-1.2
2,575,017	+				-1.0
2,575,017	+				+0.1
2,575,017	+				+1.4
2,575,017	+				-0.2
2,575,017	+				-2.6
2,575,018	-				-1.4
2,575,018	-				-0.6
2,575,018	-				+0.1
2,575,018	-				-1.2
2,575,018	-				+1.0
2,575,018	-				-1.6
2,575,018	-				-0.8
2,575,018	-				+0.4
2,575,100	+				-1.2
2,575,100	+				-1.1
2,575,101	-				-0.6
2,575,101	-				+1.0
2,575,101	-				-0.9
2,575,101	-				-2.5
2,575,115	+		Pf1N1B4_2259	0.11	+0.4
2,575,115	+		Pf1N1B4_2259	0.11	-0.1
2,575,115	+		Pf1N1B4_2259	0.11	+1.1
2,575,116	-		Pf1N1B4_2259	0.11	-0.3
2,575,116	-		Pf1N1B4_2259	0.11	-1.0
2,575,116	-		Pf1N1B4_2259	0.11	+0.6
2,575,116	-		Pf1N1B4_2259	0.11	-1.2
2,575,172	+		Pf1N1B4_2259	0.16	+0.2
2,575,290	-		Pf1N1B4_2259	0.27	-0.0
2,575,394	+		Pf1N1B4_2259	0.36	+0.4
2,575,394	+		Pf1N1B4_2259	0.36	-1.6
2,575,395	-		Pf1N1B4_2259	0.36	-0.2
2,575,395	-		Pf1N1B4_2259	0.36	-3.0
2,575,395	-		Pf1N1B4_2259	0.36	-0.0
2,575,395	-		Pf1N1B4_2259	0.36	-0.6
2,575,575	-		Pf1N1B4_2259	0.52	-1.2
2,575,575	-		Pf1N1B4_2259	0.52	-1.0
2,575,662	-		Pf1N1B4_2259	0.60	+0.4
2,575,662	-		Pf1N1B4_2259	0.60	-0.9
2,575,680	-		Pf1N1B4_2259	0.62	+0.6
2,575,680	-		Pf1N1B4_2259	0.62	+0.4
2,575,680	-		Pf1N1B4_2259	0.62	-1.6
2,575,680	-		Pf1N1B4_2259	0.62	-2.0
2,575,680	-		Pf1N1B4_2259	0.62	+0.4
2,575,680	-		Pf1N1B4_2259	0.62	-0.6
2,575,740	-		Pf1N1B4_2259	0.67	+0.1
2,575,740	-		Pf1N1B4_2259	0.67	-0.6
2,575,740	-		Pf1N1B4_2259	0.67	+1.4
2,575,740	-		Pf1N1B4_2259	0.67	-0.2
2,575,740	-		Pf1N1B4_2259	0.67	+0.4
2,575,740	-		Pf1N1B4_2259	0.67	-0.4
2,575,740	-		Pf1N1B4_2259	0.67	-1.5
2,575,790	+		Pf1N1B4_2259	0.71	+0.4
2,575,790	+		Pf1N1B4_2259	0.71	+0.1
2,575,790	+		Pf1N1B4_2259	0.71	-0.2
2,575,791	-		Pf1N1B4_2259	0.72	-1.0
2,575,791	-		Pf1N1B4_2259	0.72	+1.4
2,575,823	+		Pf1N1B4_2259	0.74	-0.6
2,575,824	-		Pf1N1B4_2259	0.74	+0.4
2,575,824	-		Pf1N1B4_2259	0.74	+0.0
2,575,824	-		Pf1N1B4_2259	0.74	-0.3
2,575,824	-		Pf1N1B4_2259	0.74	-2.0
2,576,001	-				-0.0
2,576,001	-				-1.6
2,576,031	-				+0.4
2,576,105	+				-1.2
2,576,106	-				-2.2
2,576,124	+				-0.2
2,576,124	+				-0.2
2,576,125	-				-1.6
2,576,125	-				-0.0
2,576,125	-				-0.2
2,576,125	-				-0.4
2,576,125	-				-1.6
2,576,162	+				-1.6
2,576,163	-				-1.2
2,576,163	-				-0.0
2,576,167	-				-2.4
2,576,205	+				+0.1
2,576,206	-				-0.6
2,576,206	-				-0.2
2,576,251	-				-1.4
2,576,251	-				-0.4
2,576,251	-				-0.2
2,576,251	-				-2.2
2,576,275	+				-0.6
2,576,276	-				+1.0
2,576,282	-				-1.2
2,576,301	-				+0.4
2,576,384	+				+0.0
2,576,384	+				-0.2
2,576,384	+				+0.7
2,576,384	+				-2.4
2,576,385	-				-1.3
2,576,385	-				-1.3
2,576,385	-				-1.6
2,576,385	-				-1.2
2,576,385	-				-0.6
2,576,385	-				+0.0
2,576,385	-				-1.0
2,576,385	-				-1.8
2,576,385	-				-0.6
2,576,385	-				-0.6
2,576,385	-				-2.4
2,576,385	-				+0.4
2,576,385	-				-0.6
2,576,388	+				+0.1
2,576,388	+				+0.4
2,576,388	+				+1.0
2,576,388	+				+2.7
2,576,389	-				+0.4
2,576,389	-				-0.6
2,576,389	-				-1.3
2,576,389	-				-0.2
2,576,389	-				+0.4
2,576,389	-				-0.0
2,576,389	-				+0.4
2,576,389	-				+1.0
2,576,389	-				+1.4
2,576,389	-				-2.0
2,576,389	-				+0.1
2,576,390	+				+0.4
2,576,391	-				-0.9
2,576,391	-				-1.4
2,576,403	+				+0.4
2,576,460	+		Pf1N1B4_2260	0.15	-0.6
2,576,460	+		Pf1N1B4_2260	0.15	+0.4
2,576,460	+		Pf1N1B4_2260	0.15	-0.5
2,576,460	+		Pf1N1B4_2260	0.15	-0.0
2,576,461	-		Pf1N1B4_2260	0.15	-0.6
2,576,461	-		Pf1N1B4_2260	0.15	-1.2
2,576,461	-		Pf1N1B4_2260	0.15	+2.0
2,576,461	-		Pf1N1B4_2260	0.15	-1.7
2,576,467	+		Pf1N1B4_2260	0.16	-1.8
2,576,468	-		Pf1N1B4_2260	0.16	+0.2
2,576,468	-		Pf1N1B4_2260	0.16	+0.4
2,576,592	-		Pf1N1B4_2260	0.27	-0.4
2,576,606	+		Pf1N1B4_2260	0.28	-0.6
2,576,607	-		Pf1N1B4_2260	0.28	+0.4
2,576,610	+		Pf1N1B4_2260	0.29	-0.6
2,576,610	+		Pf1N1B4_2260	0.29	+0.4
2,576,610	+		Pf1N1B4_2260	0.29	-0.2
2,576,610	+		Pf1N1B4_2260	0.29	+0.4
2,576,610	+		Pf1N1B4_2260	0.29	-1.4
2,576,611	-		Pf1N1B4_2260	0.29	-0.7
2,576,611	-		Pf1N1B4_2260	0.29	-0.7
2,576,611	-		Pf1N1B4_2260	0.29	+0.4
2,576,611	-		Pf1N1B4_2260	0.29	-1.0
2,576,671	-		Pf1N1B4_2260	0.34	+0.2
2,576,682	+		Pf1N1B4_2260	0.35	+0.8
2,576,682	+		Pf1N1B4_2260	0.35	+0.8
2,576,682	+		Pf1N1B4_2260	0.35	-0.6
2,576,683	-		Pf1N1B4_2260	0.35	-1.0
2,576,683	-		Pf1N1B4_2260	0.35	-0.4
2,576,683	-		Pf1N1B4_2260	0.35	+2.0
2,576,709	+		Pf1N1B4_2260	0.38	-0.2
2,576,859	+		Pf1N1B4_2260	0.51	-0.2
2,576,859	+		Pf1N1B4_2260	0.51	+1.4
2,576,859	+		Pf1N1B4_2260	0.51	+0.8
2,576,859	+		Pf1N1B4_2260	0.51	-2.8
2,576,859	+		Pf1N1B4_2260	0.51	-0.2
2,576,859	+		Pf1N1B4_2260	0.51	-0.6
2,576,859	+		Pf1N1B4_2260	0.51	+1.4
2,576,859	+		Pf1N1B4_2260	0.51	-1.2
2,576,860	-		Pf1N1B4_2260	0.51	-1.8
2,576,860	-		Pf1N1B4_2260	0.51	+0.4
2,576,860	-		Pf1N1B4_2260	0.51	+2.4
2,576,860	-		Pf1N1B4_2260	0.51	-2.2
2,576,860	-		Pf1N1B4_2260	0.51	+0.0
2,576,860	-		Pf1N1B4_2260	0.51	-1.9
2,576,860	-		Pf1N1B4_2260	0.51	+0.4
2,576,860	-		Pf1N1B4_2260	0.51	+1.0
2,576,860	-		Pf1N1B4_2260	0.51	-1.6
2,576,860	-		Pf1N1B4_2260	0.51	+0.0
2,576,898	+		Pf1N1B4_2260	0.55	-0.0
2,576,898	+		Pf1N1B4_2260	0.55	+0.3
2,576,898	+		Pf1N1B4_2260	0.55	-2.0
2,576,899	-		Pf1N1B4_2260	0.55	-1.7
2,576,920	+		Pf1N1B4_2260	0.57	+2.4
2,576,921	-		Pf1N1B4_2260	0.57	+1.0
2,576,937	+				+1.0
2,576,937	+		Pf1N1B4_2260	0.58	+1.4
2,576,946	+		Pf1N1B4_2260	0.59	+0.7
2,576,946	+		Pf1N1B4_2260	0.59	-0.6
2,576,946	+		Pf1N1B4_2260	0.59	-1.0
2,576,946	+		Pf1N1B4_2260	0.59	+1.0
2,576,947	-		Pf1N1B4_2260	0.59	+0.4
2,576,947	-		Pf1N1B4_2260	0.59	-0.4
2,576,947	-				-0.6
2,576,964	+		Pf1N1B4_2260	0.61	+0.4
2,576,964	+		Pf1N1B4_2260	0.61	-1.0
2,576,964	+		Pf1N1B4_2260	0.61	+0.4
2,576,965	-		Pf1N1B4_2260	0.61	+0.0
2,576,965	-		Pf1N1B4_2260	0.61	+0.4
2,576,965	-		Pf1N1B4_2260	0.61	-1.2
2,576,965	-		Pf1N1B4_2260	0.61	-0.6
2,577,076	-		Pf1N1B4_2260	0.71	+1.0