Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2255

Experiment: Putrescine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Putrescine (C)
2,570,397	-		Pf1N1B4_2254	0.64	-2.4
2,570,397	-		Pf1N1B4_2254	0.64	-1.9
2,570,397	-		Pf1N1B4_2254	0.64	-2.4
2,570,420	+		Pf1N1B4_2254	0.66	-0.6
2,570,421	-		Pf1N1B4_2254	0.66	-2.3
2,570,507	+		Pf1N1B4_2254	0.72	+0.4
2,570,508	-		Pf1N1B4_2254	0.73	-2.1
2,570,508	-		Pf1N1B4_2254	0.73	-1.6
2,570,632	+		Pf1N1B4_2254	0.82	-3.2
2,570,633	-		Pf1N1B4_2254	0.82	-2.2
2,570,761	-				-1.2
2,570,773	+				+0.4
2,570,773	+				-2.2
2,570,773	+				-0.6
2,570,774	-				+0.4
2,570,774	-				-2.2
2,570,774	-				-2.1
2,570,805	-				-1.6
2,570,805	-				-2.3
2,570,859	+				-0.6
2,570,882	+				-0.6
2,570,883	-				-1.6
2,570,883	-				-0.0
2,570,982	-				-1.4
2,571,201	-				+1.1
2,571,217	+				+0.4
2,571,217	+				-0.8
2,571,218	-				-1.9
2,571,218	-				-1.4
2,571,315	+		Pf1N1B4_2255	0.10	-1.9
2,571,315	+		Pf1N1B4_2255	0.10	-0.6
2,571,315	+		Pf1N1B4_2255	0.10	+0.4
2,571,315	+		Pf1N1B4_2255	0.10	-0.0
2,571,315	+		Pf1N1B4_2255	0.10	+0.6
2,571,315	+				+0.4
2,571,315	+		Pf1N1B4_2255	0.10	+0.2
2,571,315	+		Pf1N1B4_2255	0.10	-0.1
2,571,315	+		Pf1N1B4_2255	0.10	+1.1
2,571,316	-		Pf1N1B4_2255	0.11	-0.4
2,571,316	-		Pf1N1B4_2255	0.11	-0.0
2,571,316	-		Pf1N1B4_2255	0.11	-0.8
2,571,316	-		Pf1N1B4_2255	0.11	-0.2
2,571,316	-		Pf1N1B4_2255	0.11	-0.4
2,571,316	-		Pf1N1B4_2255	0.11	+0.4
2,571,319	+		Pf1N1B4_2255	0.11	-0.6
2,571,320	-		Pf1N1B4_2255	0.11	-1.6
2,571,379	+		Pf1N1B4_2255	0.19	+0.4
2,571,380	-		Pf1N1B4_2255	0.19	-0.9
2,571,380	-		Pf1N1B4_2255	0.19	+0.1
2,571,380	-		Pf1N1B4_2255	0.19	-1.4
2,571,380	-		Pf1N1B4_2255	0.19	-0.6
2,571,440	+		Pf1N1B4_2255	0.27	+0.4
2,571,440	+		Pf1N1B4_2255	0.27	+0.4
2,571,440	+		Pf1N1B4_2255	0.27	-0.6
2,571,441	-		Pf1N1B4_2255	0.27	+1.4
2,571,441	-		Pf1N1B4_2255	0.27	-0.8
2,571,441	-		Pf1N1B4_2255	0.27	-0.0
2,571,441	-		Pf1N1B4_2255	0.27	+1.2
2,571,441	-		Pf1N1B4_2255	0.27	-0.8
2,571,443	+				+1.4
2,571,443	+		Pf1N1B4_2255	0.27	-0.1
2,571,445	+		Pf1N1B4_2255	0.27	-0.4
2,571,445	+		Pf1N1B4_2255	0.27	-0.9
2,571,445	+		Pf1N1B4_2255	0.27	-0.5
2,571,445	+		Pf1N1B4_2255	0.27	-0.6
2,571,445	+		Pf1N1B4_2255	0.27	+0.4
2,571,445	+		Pf1N1B4_2255	0.27	+0.4
2,571,445	+		Pf1N1B4_2255	0.27	-0.4
2,571,445	+		Pf1N1B4_2255	0.27	+0.8
2,571,446	-		Pf1N1B4_2255	0.27	+0.4
2,571,446	-		Pf1N1B4_2255	0.27	+1.4
2,571,446	-		Pf1N1B4_2255	0.27	-0.6
2,571,446	-		Pf1N1B4_2255	0.27	+1.4
2,571,446	-		Pf1N1B4_2255	0.27	-1.0
2,571,446	-		Pf1N1B4_2255	0.27	-1.2
2,571,446	-				+0.4
2,571,446	-		Pf1N1B4_2255	0.27	+0.4
2,571,446	-		Pf1N1B4_2255	0.27	-0.5
2,571,446	-		Pf1N1B4_2255	0.27	-1.2
2,571,459	+		Pf1N1B4_2255	0.29	+1.4
2,571,459	+		Pf1N1B4_2255	0.29	-0.3
2,571,461	+		Pf1N1B4_2255	0.29	+0.4
2,571,485	+		Pf1N1B4_2255	0.32	+2.4
2,571,486	-		Pf1N1B4_2255	0.32	-0.6
2,571,486	-		Pf1N1B4_2255	0.32	-1.8
2,571,727	+		Pf1N1B4_2255	0.63	+0.6
2,571,727	+		Pf1N1B4_2255	0.63	-0.6
2,571,727	+		Pf1N1B4_2255	0.63	-0.2
2,571,727	+		Pf1N1B4_2255	0.63	+2.0
2,571,727	+		Pf1N1B4_2255	0.63	+0.4
2,571,728	-		Pf1N1B4_2255	0.64	-0.6
2,571,910	+		Pf1N1B4_2255	0.87	+1.4
2,571,910	+		Pf1N1B4_2255	0.87	-0.2
2,571,911	-		Pf1N1B4_2255	0.87	-2.0
2,571,911	-		Pf1N1B4_2255	0.87	-0.8
2,571,911	-		Pf1N1B4_2255	0.87	-1.4
2,571,911	-		Pf1N1B4_2255	0.87	-1.2
2,571,911	-		Pf1N1B4_2255	0.87	-0.6
2,571,927	+				-1.2
2,571,927	+		Pf1N1B4_2255	0.89	+0.4
2,571,927	+		Pf1N1B4_2255	0.89	-0.2
2,571,928	-		Pf1N1B4_2255	0.89	-0.9
2,571,928	-		Pf1N1B4_2255	0.89	+1.7
2,571,969	+				-1.2
2,571,969	+				+2.0
2,571,969	+				+1.4
2,571,969	+				-0.2
2,571,969	+				-0.6
2,571,970	-				-0.2
2,571,970	-				+1.7
2,571,970	-				+1.0
2,571,976	+				+1.4
2,571,976	+				-0.6
2,571,976	+				-0.6
2,571,976	+				+0.4
2,571,977	-				-1.8
2,572,013	+				+1.0
2,572,013	+				+0.4
2,572,013	+				+0.1
2,572,013	+				-0.3
2,572,013	+				-0.1
2,572,013	+				-0.9
2,572,013	+				+1.3
2,572,013	+				-1.2
2,572,014	-				+2.0
2,572,014	-				-0.2
2,572,014	-				+1.4
2,572,014	-				-0.1
2,572,014	-				-0.2
2,572,014	-				-0.5
2,572,014	-				-0.6
2,572,014	-				-0.2
2,572,014	-				-1.6
2,572,014	-				+1.4
2,572,014	-				-1.3
2,572,014	-				-0.6
2,572,014	-				-2.8
2,572,015	+				-0.9
2,572,015	+				-0.0
2,572,015	+				-0.2
2,572,015	+				+0.4
2,572,015	+				-1.2
2,572,015	+				-0.2
2,572,016	-				-2.4
2,572,016	-				-0.2
2,572,016	-				-0.1
2,572,016	-				+0.1
2,572,016	-				-1.2
2,572,016	-				+0.4
2,572,016	-				-0.7
2,572,016	-				-0.6
2,572,036	+				-0.2
2,572,036	+				-1.9
2,572,036	+				+1.4
2,572,037	-				-0.8
2,572,037	-				-0.2
2,572,047	+				-0.9
2,572,048	-				-1.0
2,572,048	-				-1.6
2,572,048	-				-0.1
2,572,048	-				+0.4
2,572,048	-				-0.6
2,572,048	-				-0.4
2,572,048	-				+1.0
2,572,048	-				+0.4
2,572,048	-				-0.0
2,572,048	-				-1.9
2,572,048	-				-0.0
2,572,048	-				-0.0
2,572,053	+				+0.4
2,572,054	-				+1.4
2,572,231	+		Pf1N1B4_2256	0.13	+0.4
2,572,232	-		Pf1N1B4_2256	0.14	-0.9
2,572,232	-		Pf1N1B4_2256	0.14	+0.9
2,572,232	-		Pf1N1B4_2256	0.14	+2.2
2,572,232	-		Pf1N1B4_2256	0.14	+0.4
2,572,232	-		Pf1N1B4_2256	0.14	+0.0
2,572,249	+		Pf1N1B4_2256	0.15	+0.4
2,572,249	+		Pf1N1B4_2256	0.15	-0.1
2,572,249	+		Pf1N1B4_2256	0.15	-1.2
2,572,249	+		Pf1N1B4_2256	0.15	-1.2
2,572,249	+		Pf1N1B4_2256	0.15	-1.3
2,572,249	+		Pf1N1B4_2256	0.15	+1.4
2,572,249	+		Pf1N1B4_2256	0.15	-1.4
2,572,249	+		Pf1N1B4_2256	0.15	-0.2
2,572,250	-		Pf1N1B4_2256	0.15	-1.2
2,572,250	-				-0.6
2,572,250	-		Pf1N1B4_2256	0.15	-1.1
2,572,250	-		Pf1N1B4_2256	0.15	-1.2
2,572,250	-		Pf1N1B4_2256	0.15	-0.6
2,572,250	-		Pf1N1B4_2256	0.15	+1.0
2,572,250	-		Pf1N1B4_2256	0.15	+0.4
2,572,250	-		Pf1N1B4_2256	0.15	-0.4
2,572,250	-		Pf1N1B4_2256	0.15	+2.0
2,572,250	-		Pf1N1B4_2256	0.15	-0.2
2,572,250	-		Pf1N1B4_2256	0.15	+0.4
2,572,250	-		Pf1N1B4_2256	0.15	-1.2
2,572,250	-		Pf1N1B4_2256	0.15	-1.4
2,572,250	-		Pf1N1B4_2256	0.15	-2.2
2,572,252	+		Pf1N1B4_2256	0.15	+0.4
2,572,253	-		Pf1N1B4_2256	0.15	-0.6
2,572,359	+		Pf1N1B4_2256	0.23	-1.0
2,572,360	-		Pf1N1B4_2256	0.23	-1.2
2,572,360	-		Pf1N1B4_2256	0.23	-1.2
2,572,360	-		Pf1N1B4_2256	0.23	+1.6
2,572,360	-		Pf1N1B4_2256	0.23	+0.4
2,572,360	-		Pf1N1B4_2256	0.23	-0.6
2,572,363	+		Pf1N1B4_2256	0.23	-0.2
2,572,364	-		Pf1N1B4_2256	0.23	-0.6
2,572,364	-		Pf1N1B4_2256	0.23	-0.4
2,572,364	-		Pf1N1B4_2256	0.23	-1.0
2,572,364	-		Pf1N1B4_2256	0.23	+0.4
2,572,364	-		Pf1N1B4_2256	0.23	-1.6
2,572,364	-		Pf1N1B4_2256	0.23	-1.6
2,572,477	+		Pf1N1B4_2256	0.32	+0.4
2,572,477	+		Pf1N1B4_2256	0.32	+0.4
2,572,478	-		Pf1N1B4_2256	0.32	-2.6
2,572,478	-		Pf1N1B4_2256	0.32	+0.1
2,572,478	-		Pf1N1B4_2256	0.32	+2.4
2,572,478	-		Pf1N1B4_2256	0.32	-0.2
2,572,478	-		Pf1N1B4_2256	0.32	+0.4
2,572,613	-		Pf1N1B4_2256	0.42	-0.5
2,572,613	-		Pf1N1B4_2256	0.42	-0.4