Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06198 and H281DRAFT_06199 are separated by 942 nucleotides H281DRAFT_06199 and H281DRAFT_06200 are separated by 316 nucleotides H281DRAFT_06200 and H281DRAFT_06201 are separated by 140 nucleotides
H281DRAFT_06198: H281DRAFT_06198 - hypothetical protein, at 86,416 to 86,931
_06198
H281DRAFT_06199: H281DRAFT_06199 - muramoyltetrapeptide carboxypeptidase, at 87,874 to 88,737
_06199
H281DRAFT_06200: H281DRAFT_06200 - hypothetical protein, at 89,054 to 89,311
_06200
H281DRAFT_06201: H281DRAFT_06201 - hypothetical protein, at 89,452 to 90,225
_06201
Position (kb) 87
88
89 Strain fitness (log2 ratio) -2
-1
0
1
2 at 86.948 kb on - strand at 86.968 kb on + strand at 86.968 kb on + strand at 86.968 kb on + strand at 86.969 kb on - strand at 86.973 kb on + strand at 86.973 kb on + strand at 86.973 kb on + strand at 86.974 kb on - strand at 86.980 kb on - strand at 86.980 kb on - strand at 86.980 kb on - strand at 86.984 kb on + strand at 86.994 kb on - strand at 86.994 kb on - strand at 87.018 kb on - strand at 87.110 kb on + strand at 87.111 kb on - strand at 87.123 kb on - strand at 87.124 kb on + strand at 87.124 kb on + strand at 87.124 kb on + strand at 87.124 kb on + strand at 87.124 kb on + strand at 87.124 kb on + strand at 87.124 kb on + strand at 87.124 kb on + strand at 87.125 kb on - strand at 87.125 kb on - strand at 87.125 kb on - strand at 87.338 kb on + strand at 87.338 kb on + strand at 87.338 kb on + strand at 87.338 kb on + strand at 87.338 kb on + strand at 87.339 kb on - strand at 87.350 kb on + strand at 87.351 kb on - strand at 87.357 kb on + strand at 87.358 kb on - strand at 87.359 kb on + strand at 87.360 kb on - strand at 87.386 kb on + strand at 87.386 kb on + strand at 87.387 kb on - strand at 87.387 kb on - strand at 87.387 kb on - strand at 87.405 kb on - strand at 87.443 kb on - strand at 87.500 kb on - strand at 87.500 kb on - strand at 87.517 kb on + strand at 87.517 kb on + strand at 87.518 kb on - strand at 87.518 kb on - strand at 87.518 kb on - strand at 87.527 kb on - strand at 87.528 kb on + strand at 87.635 kb on + strand at 87.658 kb on + strand at 87.658 kb on + strand at 87.659 kb on - strand at 87.805 kb on + strand at 87.805 kb on + strand at 87.806 kb on - strand at 87.811 kb on + strand at 87.812 kb on - strand at 87.860 kb on - strand at 87.919 kb on + strand at 87.965 kb on + strand, within H281DRAFT_06199 at 87.965 kb on + strand, within H281DRAFT_06199 at 87.966 kb on - strand, within H281DRAFT_06199 at 87.966 kb on - strand, within H281DRAFT_06199 at 87.966 kb on - strand, within H281DRAFT_06199 at 87.966 kb on - strand, within H281DRAFT_06199 at 88.111 kb on - strand, within H281DRAFT_06199 at 88.144 kb on + strand, within H281DRAFT_06199 at 88.144 kb on + strand, within H281DRAFT_06199 at 88.145 kb on - strand, within H281DRAFT_06199 at 88.145 kb on - strand, within H281DRAFT_06199 at 88.145 kb on - strand, within H281DRAFT_06199 at 88.306 kb on - strand, within H281DRAFT_06199 at 88.312 kb on - strand, within H281DRAFT_06199 at 88.528 kb on - strand, within H281DRAFT_06199 at 88.528 kb on - strand, within H281DRAFT_06199 at 88.567 kb on + strand, within H281DRAFT_06199 at 88.568 kb on - strand, within H281DRAFT_06199 at 88.754 kb on + strand at 88.754 kb on + strand at 88.755 kb on - strand at 88.801 kb on + strand at 88.801 kb on + strand at 88.801 kb on + strand at 89.002 kb on + strand at 89.002 kb on + strand at 89.056 kb on - strand at 89.067 kb on - strand at 89.089 kb on - strand, within H281DRAFT_06200 at 89.089 kb on - strand, within H281DRAFT_06200 at 89.162 kb on - strand, within H281DRAFT_06200 at 89.280 kb on + strand, within H281DRAFT_06200 at 89.280 kb on + strand, within H281DRAFT_06200 at 89.281 kb on - strand, within H281DRAFT_06200 at 89.281 kb on - strand, within H281DRAFT_06200 at 89.281 kb on - strand, within H281DRAFT_06200 at 89.297 kb on - strand at 89.351 kb on - strand at 89.357 kb on + strand at 89.357 kb on + strand at 89.357 kb on + strand at 89.357 kb on + strand at 89.358 kb on - strand at 89.358 kb on - strand at 89.400 kb on + strand at 89.400 kb on + strand at 89.401 kb on - strand at 89.419 kb on - strand at 89.466 kb on + strand at 89.466 kb on + strand at 89.603 kb on + strand, within H281DRAFT_06201 at 89.603 kb on + strand, within H281DRAFT_06201 at 89.610 kb on + strand, within H281DRAFT_06201 at 89.645 kb on - strand, within H281DRAFT_06201 at 89.708 kb on + strand, within H281DRAFT_06201 at 89.708 kb on + strand, within H281DRAFT_06201 at 89.708 kb on + strand, within H281DRAFT_06201 at 89.708 kb on + strand, within H281DRAFT_06201 at 89.708 kb on + strand, within H281DRAFT_06201 at 89.709 kb on - strand, within H281DRAFT_06201 at 89.709 kb on - strand, within H281DRAFT_06201 at 89.709 kb on - strand, within H281DRAFT_06201 at 89.709 kb on - strand, within H281DRAFT_06201 at 89.709 kb on - strand, within H281DRAFT_06201 at 89.709 kb on - strand, within H281DRAFT_06201 at 89.709 kb on - strand, within H281DRAFT_06201 at 89.710 kb on + strand, within H281DRAFT_06201 at 89.710 kb on + strand, within H281DRAFT_06201 at 89.711 kb on - strand, within H281DRAFT_06201 at 89.711 kb on - strand, within H281DRAFT_06201 at 89.711 kb on - strand, within H281DRAFT_06201 at 89.712 kb on + strand, within H281DRAFT_06201 at 89.712 kb on + strand, within H281DRAFT_06201 at 89.712 kb on + strand, within H281DRAFT_06201 at 89.712 kb on + strand, within H281DRAFT_06201 at 89.712 kb on + strand, within H281DRAFT_06201 at 89.712 kb on + strand, within H281DRAFT_06201 at 89.713 kb on - strand, within H281DRAFT_06201 at 89.713 kb on - strand, within H281DRAFT_06201 at 89.737 kb on + strand, within H281DRAFT_06201
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C) remove 86,948 - -0.8 86,968 + -0.0 86,968 + -0.1 86,968 + -0.0 86,969 - +0.7 86,973 + +0.2 86,973 + +0.7 86,973 + -0.2 86,974 - +1.2 86,980 - +0.8 86,980 - +0.6 86,980 - +1.8 86,984 + -1.7 86,994 - +1.2 86,994 - +0.3 87,018 - +0.5 87,110 + +0.7 87,111 - +0.5 87,123 - +0.4 87,124 + -0.3 87,124 + -0.2 87,124 + -0.7 87,124 + -1.5 87,124 + +2.1 87,124 + -2.3 87,124 + +0.6 87,124 + +0.1 87,125 - +1.2 87,125 - -0.0 87,125 - +0.5 87,338 + -0.3 87,338 + +0.0 87,338 + -0.2 87,338 + +0.9 87,338 + +0.5 87,339 - -2.4 87,350 + +0.9 87,351 - +0.1 87,357 + +0.0 87,358 - -0.0 87,359 + -0.3 87,360 - -0.2 87,386 + +0.1 87,386 + -0.6 87,387 - +1.7 87,387 - -1.9 87,387 - -0.2 87,405 - +0.2 87,443 - -0.4 87,500 - +0.4 87,500 - +0.7 87,517 + +1.7 87,517 + -0.3 87,518 - -0.2 87,518 - +0.0 87,518 - +2.6 87,527 - +0.5 87,528 + +0.3 87,635 + +0.3 87,658 + -0.2 87,658 + +0.2 87,659 - +1.8 87,805 + -0.7 87,805 + +0.2 87,806 - -0.6 87,811 + -1.1 87,812 - +0.3 87,860 - +1.6 87,919 + +2.0 87,965 + H281DRAFT_06199 0.11 +0.7 87,965 + H281DRAFT_06199 0.11 -0.5 87,966 - H281DRAFT_06199 0.11 -0.5 87,966 - H281DRAFT_06199 0.11 -0.5 87,966 - H281DRAFT_06199 0.11 -0.1 87,966 - H281DRAFT_06199 0.11 +0.3 88,111 - H281DRAFT_06199 0.27 -0.5 88,144 + H281DRAFT_06199 0.31 +0.2 88,144 + H281DRAFT_06199 0.31 -0.2 88,145 - H281DRAFT_06199 0.31 -0.4 88,145 - H281DRAFT_06199 0.31 -0.6 88,145 - H281DRAFT_06199 0.31 -0.5 88,306 - H281DRAFT_06199 0.50 -0.3 88,312 - H281DRAFT_06199 0.51 -0.3 88,528 - H281DRAFT_06199 0.76 +0.8 88,528 - H281DRAFT_06199 0.76 -0.5 88,567 + H281DRAFT_06199 0.80 -1.2 88,568 - H281DRAFT_06199 0.80 -0.7 88,754 + +0.2 88,754 + -0.4 88,755 - +1.0 88,801 + +0.1 88,801 + +0.1 88,801 + -1.0 89,002 + +0.3 89,002 + -0.7 89,056 - +0.3 89,067 - -0.1 89,089 - H281DRAFT_06200 0.14 -0.5 89,089 - H281DRAFT_06200 0.14 +0.2 89,162 - H281DRAFT_06200 0.42 -0.2 89,280 + H281DRAFT_06200 0.88 -0.8 89,280 + H281DRAFT_06200 0.88 +0.4 89,281 - H281DRAFT_06200 0.88 +0.2 89,281 - H281DRAFT_06200 0.88 -0.6 89,281 - H281DRAFT_06200 0.88 -0.3 89,297 - -0.1 89,351 - -0.2 89,357 + -0.0 89,357 + -0.2 89,357 + -0.6 89,357 + +0.1 89,358 - -0.0 89,358 - +0.2 89,400 + -0.1 89,400 + -0.2 89,401 - -0.1 89,419 - +0.6 89,466 + -0.4 89,466 + -0.1 89,603 + H281DRAFT_06201 0.20 +0.3 89,603 + H281DRAFT_06201 0.20 -0.7 89,610 + H281DRAFT_06201 0.20 -0.3 89,645 - H281DRAFT_06201 0.25 +0.2 89,708 + H281DRAFT_06201 0.33 -0.7 89,708 + H281DRAFT_06201 0.33 +0.2 89,708 + H281DRAFT_06201 0.33 +0.0 89,708 + H281DRAFT_06201 0.33 +1.1 89,708 + H281DRAFT_06201 0.33 +0.0 89,709 - H281DRAFT_06201 0.33 -0.4 89,709 - H281DRAFT_06201 0.33 -0.9 89,709 - H281DRAFT_06201 0.33 +1.0 89,709 - H281DRAFT_06201 0.33 -0.5 89,709 - H281DRAFT_06201 0.33 +1.1 89,709 - H281DRAFT_06201 0.33 -0.3 89,709 - H281DRAFT_06201 0.33 -0.6 89,710 + H281DRAFT_06201 0.33 +0.1 89,710 + H281DRAFT_06201 0.33 +0.7 89,711 - H281DRAFT_06201 0.33 +0.5 89,711 - H281DRAFT_06201 0.33 -0.5 89,711 - H281DRAFT_06201 0.33 +0.1 89,712 + H281DRAFT_06201 0.34 +0.9 89,712 + H281DRAFT_06201 0.34 -0.1 89,712 + H281DRAFT_06201 0.34 -0.4 89,712 + H281DRAFT_06201 0.34 -0.8 89,712 + H281DRAFT_06201 0.34 -0.4 89,712 + H281DRAFT_06201 0.34 -0.2 89,713 - H281DRAFT_06201 0.34 -0.0 89,713 - H281DRAFT_06201 0.34 +0.7 89,737 + H281DRAFT_06201 0.37 -0.8
Or see this region's nucleotide sequence