Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06005 and H281DRAFT_06006 are separated by 279 nucleotides H281DRAFT_06006 and H281DRAFT_06007 are separated by 105 nucleotides H281DRAFT_06007 and H281DRAFT_06008 are separated by 632 nucleotides
H281DRAFT_06005: H281DRAFT_06005 - methyltransferase, FkbM family, at 6,078 to 6,788
_06005
H281DRAFT_06006: H281DRAFT_06006 - MEKHLA domain-containing protein, at 7,068 to 7,523
_06006
H281DRAFT_06007: H281DRAFT_06007 - amino acid ABC transporter substrate-binding protein, PAAT family, at 7,629 to 8,360
_06007
H281DRAFT_06008: H281DRAFT_06008 - RNA polymerase, sigma 70 subunit, RpoD, at 8,993 to 11,227
_06008
Position (kb) 7
8
9 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 6.644 kb on - strand, within H281DRAFT_06005 at 6.644 kb on - strand, within H281DRAFT_06005 at 6.673 kb on - strand, within H281DRAFT_06005 at 6.712 kb on + strand, within H281DRAFT_06005 at 6.712 kb on + strand, within H281DRAFT_06005 at 6.712 kb on + strand, within H281DRAFT_06005 at 6.713 kb on - strand, within H281DRAFT_06005 at 6.713 kb on - strand, within H281DRAFT_06005 at 6.776 kb on + strand at 6.829 kb on + strand at 6.859 kb on + strand at 6.859 kb on + strand at 6.927 kb on + strand at 7.036 kb on + strand at 7.060 kb on + strand at 7.060 kb on + strand at 7.060 kb on + strand at 7.060 kb on + strand at 7.345 kb on + strand, within H281DRAFT_06006 at 7.346 kb on - strand, within H281DRAFT_06006 at 7.346 kb on - strand, within H281DRAFT_06006 at 7.436 kb on + strand, within H281DRAFT_06006 at 7.437 kb on - strand, within H281DRAFT_06006 at 7.457 kb on + strand, within H281DRAFT_06006 at 7.474 kb on + strand, within H281DRAFT_06006 at 7.478 kb on + strand at 7.478 kb on + strand at 7.479 kb on - strand at 7.479 kb on - strand at 7.479 kb on - strand at 7.479 kb on - strand at 7.528 kb on + strand at 7.529 kb on - strand at 7.627 kb on + strand at 7.628 kb on - strand at 7.714 kb on + strand, within H281DRAFT_06007 at 7.714 kb on + strand, within H281DRAFT_06007 at 7.892 kb on - strand, within H281DRAFT_06007 at 7.892 kb on - strand, within H281DRAFT_06007 at 7.923 kb on + strand, within H281DRAFT_06007 at 8.053 kb on + strand, within H281DRAFT_06007 at 8.053 kb on + strand, within H281DRAFT_06007 at 8.054 kb on - strand, within H281DRAFT_06007 at 8.054 kb on - strand, within H281DRAFT_06007 at 8.054 kb on - strand, within H281DRAFT_06007 at 8.054 kb on - strand, within H281DRAFT_06007 at 8.193 kb on + strand, within H281DRAFT_06007 at 8.193 kb on + strand, within H281DRAFT_06007 at 8.194 kb on - strand, within H281DRAFT_06007 at 8.220 kb on - strand, within H281DRAFT_06007 at 8.402 kb on + strand at 8.403 kb on - strand at 8.836 kb on - strand at 8.853 kb on + strand at 8.853 kb on + strand at 8.853 kb on + strand at 8.854 kb on - strand at 8.854 kb on - strand at 8.893 kb on + strand at 8.894 kb on - strand at 8.894 kb on - strand at 8.894 kb on - strand at 8.896 kb on + strand at 8.896 kb on + strand at 8.964 kb on + strand at 8.965 kb on - strand at 8.965 kb on - strand at 8.968 kb on + strand at 8.969 kb on - strand at 8.969 kb on - strand at 8.975 kb on + strand at 8.976 kb on - strand at 8.976 kb on - strand at 9.262 kb on + strand, within H281DRAFT_06008 at 9.263 kb on - strand, within H281DRAFT_06008
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C) remove 6,644 - H281DRAFT_06005 0.80 -2.1 6,644 - H281DRAFT_06005 0.80 -0.7 6,673 - H281DRAFT_06005 0.84 +0.3 6,712 + H281DRAFT_06005 0.89 +0.2 6,712 + H281DRAFT_06005 0.89 -0.4 6,712 + H281DRAFT_06005 0.89 -0.6 6,713 - H281DRAFT_06005 0.89 +0.6 6,713 - H281DRAFT_06005 0.89 +0.2 6,776 + -0.2 6,829 + -0.8 6,859 + -0.1 6,859 + -0.3 6,927 + +0.1 7,036 + +0.9 7,060 + +1.8 7,060 + -0.4 7,060 + +0.4 7,060 + +0.2 7,345 + H281DRAFT_06006 0.61 +0.4 7,346 - H281DRAFT_06006 0.61 +0.5 7,346 - H281DRAFT_06006 0.61 -0.3 7,436 + H281DRAFT_06006 0.81 +0.1 7,437 - H281DRAFT_06006 0.81 -0.3 7,457 + H281DRAFT_06006 0.85 +1.0 7,474 + H281DRAFT_06006 0.89 -0.4 7,478 + -0.2 7,478 + -2.2 7,479 - +1.2 7,479 - +0.1 7,479 - -0.2 7,479 - +0.5 7,528 + -0.6 7,529 - +0.7 7,627 + -0.0 7,628 - -0.2 7,714 + H281DRAFT_06007 0.12 +0.6 7,714 + H281DRAFT_06007 0.12 -0.8 7,892 - H281DRAFT_06007 0.36 +0.4 7,892 - H281DRAFT_06007 0.36 -1.2 7,923 + H281DRAFT_06007 0.40 -0.1 8,053 + H281DRAFT_06007 0.58 +0.4 8,053 + H281DRAFT_06007 0.58 +0.2 8,054 - H281DRAFT_06007 0.58 -1.3 8,054 - H281DRAFT_06007 0.58 +0.5 8,054 - H281DRAFT_06007 0.58 +0.1 8,054 - H281DRAFT_06007 0.58 +0.4 8,193 + H281DRAFT_06007 0.77 +0.2 8,193 + H281DRAFT_06007 0.77 +0.4 8,194 - H281DRAFT_06007 0.77 +0.3 8,220 - H281DRAFT_06007 0.81 +0.3 8,402 + -0.5 8,403 - -0.2 8,836 - -0.7 8,853 + -0.7 8,853 + -0.2 8,853 + +0.8 8,854 - +0.3 8,854 - +0.2 8,893 + +0.3 8,894 - -0.2 8,894 - -0.2 8,894 - +0.7 8,896 + -0.0 8,896 + +0.6 8,964 + +0.4 8,965 - +0.6 8,965 - -1.1 8,968 + +0.0 8,969 - -0.9 8,969 - -0.4 8,975 + -0.4 8,976 - -0.4 8,976 - -0.1 9,262 + H281DRAFT_06008 0.12 -3.0 9,263 - H281DRAFT_06008 0.12 -3.8
Or see this region's nucleotide sequence